BLASTX nr result

ID: Bupleurum21_contig00029952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029952
         (296 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]                  103   1e-20
gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]                103   1e-20
ref|XP_002300338.1| predicted protein [Populus trichocarpa] gi|2...    99   4e-19
emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]    97   1e-18
ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256...    97   2e-18

>gb|AGC39094.1| remorin-3 protein [Dimocarpus longan]
          Length = 541

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 MDYERIHRPQTGIISPSKLRMKLMG-QQRKKEGSNSNSARTSPSKLEDTEFVRNSLLASN 23
           MDYERIH+ QTGIISPSKLRMKL+G   RKKEGSNSNS+RTSP+KL+D+EFVRNSLLASN
Sbjct: 1   MDYERIHKVQTGIISPSKLRMKLIGPHNRKKEGSNSNSSRTSPAKLDDSEFVRNSLLASN 60

Query: 22  VDDYYEE 2
             D+ EE
Sbjct: 61  GGDFDEE 67


>gb|AFB69339.1| remorin-1d, partial [Dimocarpus longan]
          Length = 249

 Score =  103 bits (257), Expect = 1e-20
 Identities = 53/67 (79%), Positives = 60/67 (89%), Gaps = 1/67 (1%)
 Frame = -2

Query: 199 MDYERIHRPQTGIISPSKLRMKLMG-QQRKKEGSNSNSARTSPSKLEDTEFVRNSLLASN 23
           MDYERIH+ QTGIISPSKLRMKL+G   RKKEGSNSNS+RTSP+KL+D+EFVRNSLLASN
Sbjct: 1   MDYERIHKVQTGIISPSKLRMKLIGPHNRKKEGSNSNSSRTSPAKLDDSEFVRNSLLASN 60

Query: 22  VDDYYEE 2
             D+ EE
Sbjct: 61  GGDFDEE 67


>ref|XP_002300338.1| predicted protein [Populus trichocarpa] gi|222847596|gb|EEE85143.1|
           predicted protein [Populus trichocarpa]
          Length = 528

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 50/68 (73%), Positives = 59/68 (86%), Gaps = 2/68 (2%)
 Frame = -2

Query: 199 MDYERIHRPQTGIISPSKLRMKLMG--QQRKKEGSNSNSARTSPSKLEDTEFVRNSLLAS 26
           MDYERIH+ Q+GIISPSKLRMKL+G    RKK+GSNSNS+RTSPSKL+D EFV+NSLLAS
Sbjct: 1   MDYERIHKVQSGIISPSKLRMKLVGPHHNRKKDGSNSNSSRTSPSKLQDNEFVKNSLLAS 60

Query: 25  NVDDYYEE 2
           +  D+ EE
Sbjct: 61  DFGDFGEE 68


>emb|CAN71634.1| hypothetical protein VITISV_036630 [Vitis vinifera]
          Length = 585

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 50/63 (79%), Positives = 56/63 (88%), Gaps = 2/63 (3%)
 Frame = -2

Query: 211 EKKQMDYERIHRPQTGIISPSKLRMKLMG--QQRKKEGSNSNSARTSPSKLEDTEFVRNS 38
           E   M+YERIH+ QTGIISPSKLRMKLMG   QRKK+GSNSNS+RTSPSKLED+EFV+NS
Sbjct: 56  ESXLMEYERIHKVQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNS 115

Query: 37  LLA 29
           LLA
Sbjct: 116 LLA 118


>ref|XP_002272255.1| PREDICTED: uncharacterized protein LOC100256651 [Vitis vinifera]
           gi|297740766|emb|CBI30948.3| unnamed protein product
           [Vitis vinifera]
          Length = 526

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 49/59 (83%), Positives = 55/59 (93%), Gaps = 2/59 (3%)
 Frame = -2

Query: 199 MDYERIHRPQTGIISPSKLRMKLMG--QQRKKEGSNSNSARTSPSKLEDTEFVRNSLLA 29
           M+YERIH+ QTGIISPSKLRMKLMG   QRKK+GSNSNS+RTSPSKLED+EFV+NSLLA
Sbjct: 1   MEYERIHKVQTGIISPSKLRMKLMGPHHQRKKDGSNSNSSRTSPSKLEDSEFVKNSLLA 59


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