BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029942
         (514 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|2...   266   1e-69
ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containi...   254   5e-66
ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containi...   254   7e-66
ref|XP_002520500.1| pentatricopeptide repeat-containing protein,...   249   2e-64
ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arab...   240   1e-61

>ref|XP_002313416.1| predicted protein [Populus trichocarpa] gi|222849824|gb|EEE87371.1|
           predicted protein [Populus trichocarpa]
          Length = 650

 Score =  266 bits (681), Expect = 1e-69
 Identities = 126/171 (73%), Positives = 146/171 (85%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y YVLKACVA    V LLNKG+EIH H+LRHGY G+VH+MTTLVD+YAKFGC+  ASCVF
Sbjct: 174 YTYVLKACVASECFVSLLNKGREIHAHILRHGYDGYVHIMTTLVDMYAKFGCVSNASCVF 233

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSA 155
             MPVKNVVSWS MIAC AKNG  FEA+ELFRE+MLE   L PNSVTM+SV+QAC AL+A
Sbjct: 234 NQMPVKNVVSWSAMIACYAKNGKAFEALELFRELMLETQDLCPNSVTMVSVLQACAALAA 293

Query: 154 LERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           LE+GR +HGY+LRKGLDS+LPV+SALVTMYARCG L +G+RVFD M++RDV
Sbjct: 294 LEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQMDKRDV 344



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 46/164 (28%), Positives = 88/164 (53%), Gaps = 1/164 (0%)
 Frame = -1

Query: 505 VLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGM 326
           VL+AC A    +  L +G+ IHG++LR G    + V++ LV +YA+ G L     VF  M
Sbjct: 284 VLQACAA----LAALEQGRLIHGYILRKGLDSILPVISALVTMYARCGKLELGQRVFDQM 339

Query: 325 PVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSALER 146
             ++VVSW+ +I+    +G   +A+ +F EM    +G+ P+ ++ +SV+ AC+    ++ 
Sbjct: 340 DKRDVVSWNSLISSYGVHGFGKKAIGIFEEM--TYNGVEPSPISFVSVLGACSHAGLVDE 397

Query: 145 GRSLHGYV-LRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHM 17
           G+ L   + +  G+   +   + +V +  R   L    ++ ++M
Sbjct: 398 GKMLFNSMHVAHGICPSVEHYACMVDLLGRANRLEEAAKIIENM 441


>ref|XP_002280428.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic [Vitis vinifera]
          Length = 658

 Score =  254 bits (649), Expect = 5e-66
 Identities = 119/171 (69%), Positives = 146/171 (85%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y YVLKACVA    V LL  G+EIHGH+LRHG+ GHVH+MTTL+D+YA+FGC++ AS VF
Sbjct: 182 YTYVLKACVASEAFVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVF 241

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSA 155
             MPVKNVVSWS MIAC +KNG P EA+ELFR+MMLE   L+PNSVTM+SV+QAC AL+A
Sbjct: 242 DQMPVKNVVSWSAMIACYSKNGKPLEALELFRKMMLENQDLLPNSVTMVSVLQACAALAA 301

Query: 154 LERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           LE+G+ +HGY+LR+GLDS+LPVVSALVT+YARCG+L +G RVF+ ME+RDV
Sbjct: 302 LEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERMEKRDV 352



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 52/166 (31%), Positives = 91/166 (54%), Gaps = 3/166 (1%)
 Frame = -1

Query: 505 VLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGM 326
           VL+AC A    +  L +GK +HG++LR G    + V++ LV VYA+ G L     VF  M
Sbjct: 292 VLQACAA----LAALEQGKLMHGYILRRGLDSILPVVSALVTVYARCGNLELGHRVFERM 347

Query: 325 PVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSALER 146
             ++VVSW+ +I+    +G   +A+++F+EM+ +  GL P+ ++ +SV+ AC+    +E 
Sbjct: 348 EKRDVVSWNSLISSYGIHGFGRKAIQIFKEMIDQ--GLSPSPISFVSVLGACSHAGLVEE 405

Query: 145 GRSLHGYVLRKGLDSVLPVV---SALVTMYARCGDLAIGRRVFDHM 17
           G+ L   ++R     + P V   + +V +  R   L    ++ D M
Sbjct: 406 GKVLFESMVRG--HKIFPSVEHYACMVDLLGRANRLDEAAKIIDDM 449



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 47/175 (26%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y  ++ +C    T    L +G ++H H++  G      + T L+++Y++   +  A  VF
Sbjct: 81  YELLILSC----TRQNSLPQGIDLHRHLIHDGSDQDPFLATKLINMYSELDSIDNARKVF 136

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTA--- 164
                + +  W+ +       G   E ++L+R M     G+  +  T   V++AC A   
Sbjct: 137 DKTRKRTIYVWNALFRALTLAGYGREVLDLYRRM--NRIGVPSDRFTYTYVLKACVASEA 194

Query: 163 -LSALERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
            +S L  GR +HG++LR G +  + +++ L+ MYAR G +    RVFD M  ++V
Sbjct: 195 FVSLLLNGREIHGHILRHGFEGHVHIMTTLLDMYARFGCVLNASRVFDQMPVKNV 249


>ref|XP_004145327.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449474033|ref|XP_004154055.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
           gi|449510921|ref|XP_004163811.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 649

 Score =  254 bits (648), Expect = 7e-66
 Identities = 117/171 (68%), Positives = 140/171 (81%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y Y+LKACVA    V  L KGKEIH H+LRHGYG HVHVMTTL+D+YA+FGC+ YAS VF
Sbjct: 173 YTYLLKACVASECLVSFLQKGKEIHAHILRHGYGAHVHVMTTLMDMYARFGCVSYASAVF 232

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSA 155
             MPVKNVVSWS MIAC AKNG P+EA+ELFREMML  H  VPNSVTM+SV+QAC A +A
Sbjct: 233 DEMPVKNVVSWSAMIACYAKNGKPYEALELFREMMLNTHDSVPNSVTMVSVLQACAAFAA 292

Query: 154 LERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           LE+G+ +H Y+LR+GLDS+LPV+SAL+TMYARCG L  G+ +FD M ++DV
Sbjct: 293 LEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRMHKKDV 343



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 47/164 (28%), Positives = 84/164 (51%), Gaps = 1/164 (0%)
 Frame = -1

Query: 505 VLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGM 326
           VL+AC A       L +GK IH ++LR G    + V++ L+ +YA+ G L     +F  M
Sbjct: 283 VLQACAA----FAALEQGKLIHAYILRRGLDSILPVISALITMYARCGKLESGQLIFDRM 338

Query: 325 PVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSALER 146
             K+VV W+ +I+    +G   +A+++F EM+   HG  P+ ++ ISV+ AC+    +E 
Sbjct: 339 HKKDVVLWNSLISSYGLHGYGRKAIKIFEEMI--DHGFSPSHISFISVLGACSHTGLVEE 396

Query: 145 GRSL-HGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHM 17
           G+ L    V   G+   +   + +V +  R   L    ++ + +
Sbjct: 397 GKKLFESMVKEHGIQPSVEHYACMVDLLGRANRLDEAAKIIEDL 440



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 39/158 (24%), Positives = 81/158 (51%), Gaps = 4/158 (2%)
 Frame = -1

Query: 463 LNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGMPVKNVVSWSGMIAC 284
           L+   ++H  ++  G+     + T L++++++   +  A  VF     + +  W+ +   
Sbjct: 85  LSDALDVHQLLVDGGFDQDPFLATKLINMFSELDTVDNARKVFDKTRKRTIYVWNALFRA 144

Query: 283 CAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTA----LSALERGRSLHGYVLR 116
            A  G   + +EL+  M   M G+  +  T   +++AC A    +S L++G+ +H ++LR
Sbjct: 145 LALAGRGNDVLELYPRM--NMMGVSSDRFTYTYLLKACVASECLVSFLQKGKEIHAHILR 202

Query: 115 KGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
            G  + + V++ L+ MYAR G ++    VFD M  ++V
Sbjct: 203 HGYGAHVHVMTTLMDMYARFGCVSYASAVFDEMPVKNV 240


>ref|XP_002520500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540342|gb|EEF41913.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 414

 Score =  249 bits (636), Expect = 2e-64
 Identities = 118/171 (69%), Positives = 141/171 (82%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y YVLKACVA  + + LL KGKEIH  +LR GY  HVH+MTTLVD+YA+FG + YASCVF
Sbjct: 175 YTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAHVHIMTTLVDMYARFGYVSYASCVF 234

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSA 155
             M VKNVVSWS MIAC AKNG PFEA+ELFREMMLE   + PNSVTM+SV+QAC AL+A
Sbjct: 235 SEMSVKNVVSWSAMIACYAKNGRPFEALELFREMMLETKDMCPNSVTMVSVLQACAALAA 294

Query: 154 LERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           LE+G+ LHGY+LR+GLDS+LPV+S+LVTMYARCG L + + VFD M++RDV
Sbjct: 295 LEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQMDKRDV 345



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 42/124 (33%), Positives = 76/124 (61%)
 Frame = -1

Query: 505 VLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGM 326
           VL+AC A    +  L +GK +HG++LR G    + V+++LV +YA+ G L  A  VF  M
Sbjct: 285 VLQACAA----LAALEQGKLLHGYILRRGLDSILPVISSLVTMYARCGKLQLAQHVFDQM 340

Query: 325 PVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSALER 146
             ++VVSW+ +I+    +G   +A+++F++M    +G+ P+ ++ +SV+ AC+    +E 
Sbjct: 341 DKRDVVSWNSLISSYGVHGFGKKAIQIFKDM--TRNGVFPSPISFVSVLGACSHAGLVEE 398

Query: 145 GRSL 134
           G+ L
Sbjct: 399 GKIL 402



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 43/152 (28%), Positives = 80/152 (52%), Gaps = 4/152 (2%)
 Frame = -1

Query: 445 IHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGMPVKNVVSWSGMIACCAKNGN 266
           +H H+L +G+     + T L+++Y+ FG +  A  VF     + +  ++ +       GN
Sbjct: 93  VHQHLLDNGFDQDPFLATKLINMYSSFGSIDNARKVFDKTRSRTLYVYNALFRALTLVGN 152

Query: 265 PFEAVELFREMMLEMHGLVPNSVTMISVIQACTA----LSALERGRSLHGYVLRKGLDSV 98
             E + L+R M     G+  +  T   V++AC A    LS L++G+ +H  +LR+G ++ 
Sbjct: 153 GEEVLRLYRRM--NSIGMPSDRFTYTYVLKACVASNSLLSLLKKGKEIHAQILRRGYEAH 210

Query: 97  LPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           + +++ LV MYAR G ++    VF  M  ++V
Sbjct: 211 VHIMTTLVDMYARFGYVSYASCVFSEMSVKNV 242


>ref|XP_002877513.1| hypothetical protein ARALYDRAFT_905886 [Arabidopsis lyrata subsp.
           lyrata] gi|297323351|gb|EFH53772.1| hypothetical protein
           ARALYDRAFT_905886 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  240 bits (612), Expect = 1e-61
 Identities = 114/171 (66%), Positives = 135/171 (78%)
 Frame = -1

Query: 514 YNYVLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVF 335
           Y YVLKACVA   +   L KGKEIH H+ R GY  HV++MTTLVD+YA+FGC+ YAS VF
Sbjct: 181 YTYVLKACVASECTADHLTKGKEIHAHLTRRGYNSHVYIMTTLVDMYARFGCVDYASYVF 240

Query: 334 YGMPVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSA 155
            GMPV+NVVSWS MIAC AKNG  FEA+  FREMM E     PNSVTM+SV+QAC +L+A
Sbjct: 241 NGMPVRNVVSWSAMIACYAKNGKAFEALRTFREMMTETKDSSPNSVTMVSVLQACASLAA 300

Query: 154 LERGRSLHGYVLRKGLDSVLPVVSALVTMYARCGDLAIGRRVFDHMERRDV 2
           LE+GR +HGY+LR+GLDS+LPV+SALVTMY RCG L +G+RVFD M  RDV
Sbjct: 301 LEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRMHDRDV 351



 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 43/124 (34%), Positives = 71/124 (57%)
 Frame = -1

Query: 505 VLKACVAEVTSVGLLNKGKEIHGHVLRHGYGGHVHVMTTLVDVYAKFGCLVYASCVFYGM 326
           VL+AC     S+  L +G+ IHG++LR G    + V++ LV +Y + G L     VF  M
Sbjct: 291 VLQACA----SLAALEQGRLIHGYILRRGLDSILPVISALVTMYGRCGKLDVGQRVFDRM 346

Query: 325 PVKNVVSWSGMIACCAKNGNPFEAVELFREMMLEMHGLVPNSVTMISVIQACTALSALER 146
             ++VVSW+ +I+    +G   +A+++F EM+   +G  P  VT +SV+ AC+    +E 
Sbjct: 347 HDRDVVSWNSLISSYGVHGYGRKAIQIFEEML--ANGASPTPVTFVSVLGACSHEGLVEE 404

Query: 145 GRSL 134
           G+ L
Sbjct: 405 GKRL 408