BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029921
         (614 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADB85289.1| putative retrotransposon protein [Phyllostachys e...    66   6e-09
gb|AAP53789.1| retrotransposon protein, putative, unclassified [...    63   5e-08
gb|AAV32203.1| unknown protein [Oryza sativa Japonica Group]           60   2e-07
gb|ABA99961.1| retrotransposon protein, putative, unclassified [...    59   7e-07
emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]    59   7e-07

>gb|ADB85289.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 397

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 12/116 (10%)
 Frame = -1

Query: 599 DTACKGLQYTIQGCKFSSDLRLYSLGGYDIILGVDWLHQHNPITFDFHALSITINKDGRS 420
           DT C+G +Y IQG KFSSD+R+  L GY +I G DW+  HNPI  +  A   +I K G  
Sbjct: 239 DTLCQGCKYEIQGEKFSSDMRVLPLRGYHVIFGADWICTHNPIGLNLRAREFSITKHGVK 298

Query: 419 IMLQGAENKGAIQEISGTKSIPQ------------GYICMIQSPDAIPSPDLMSHL 288
            +    E +     I     +P+             +  + QS +A   P+LM  +
Sbjct: 299 QITFKDETQPDQNSIISLNQLPKLMKKGVVGAVIYAHTNVFQSDEASQIPELMQEI 354


>gb|AAP53789.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1611

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 4/89 (4%)
 Frame = -1

Query: 584 GLQYTIQGCKFSSDLRLYSLGGYDIILGVDWLHQHNPITFDFHALSITINKDGRSIMLQG 405
           G++Y IQG  F++   L SL  YDIILG DW+ +++PIT D     + I K GR + +Q 
Sbjct: 569 GMEYEIQGESFTNSFNLLSLERYDIILGADWIFKYSPITLDLRKREMKITKGGRELEIQD 628

Query: 404 AENKGAIQEISGT---KSIPQGYI-CMIQ 330
               G   ++S     K I +G + C+IQ
Sbjct: 629 FTKPGKYFQVSNKKMGKMIKKGALGCVIQ 657


>gb|AAV32203.1| unknown protein [Oryza sativa Japonica Group]
          Length = 434

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/68 (38%), Positives = 46/68 (67%)
 Frame = -1

Query: 596 TACKGLQYTIQGCKFSSDLRLYSLGGYDIILGVDWLHQHNPITFDFHALSITINKDGRSI 417
           +A    Q++ QG  F++ LR+ SL  YD+ILG+DWL +H+P+T ++    +T++  G+ I
Sbjct: 55  SAITNCQWSTQGYVFNTTLRVLSLNSYDLILGMDWLTEHSPMTVNWATKQLTVSLKGQFI 114

Query: 416 MLQGAENK 393
           +LQG  ++
Sbjct: 115 LLQGINSQ 122


>gb|ABA99961.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1619

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 29/88 (32%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
 Frame = -1

Query: 599 DTACKGL-----QYTIQGCKFSSDLRLYSLGGYDIILGVDWLHQHNPITFDFHALSITIN 435
           +T C G      ++ +QG KF + LR+  +  YD+ILG+DWL +H+P++ D+   +IT++
Sbjct: 520 ETLCCGAIIPNCEWQVQGHKFQTTLRVLPITSYDMILGMDWLMKHSPMSVDWSLKTITLS 579

Query: 434 KDGRSIMLQGAENKGAIQEISGTKSIPQ 351
             G ++ LQG  ++ A  +I     + Q
Sbjct: 580 LQGTTVTLQGVHSELAHCKILSANEMQQ 607


>emb|CAN68077.1| hypothetical protein VITISV_042019 [Vitis vinifera]
          Length = 480

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 28/65 (43%), Positives = 38/65 (58%)
 Frame = -1

Query: 599 DTACKGLQYTIQGCKFSSDLRLYSLGGYDIILGVDWLHQHNPITFDFHALSITINKDGRS 420
           D   +   + +QG +F  DLRL  LGGYD++LG+ WL +  PI +DF  L      DGR 
Sbjct: 282 DATYRQSTWNMQGKEFQVDLRLIPLGGYDMVLGIQWLAELGPILWDFKNLRXKFIVDGRK 341

Query: 419 IMLQG 405
            ML+G
Sbjct: 342 FMLRG 346