BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029889
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containi...   134   7e-30
ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containi...   126   2e-27
ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|2...   106   3e-21
ref|XP_002523296.1| pentatricopeptide repeat-containing protein,...   100   1e-19
ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containi...    97   1e-18

>ref|XP_002280276.2| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 684

 Score =  134 bits (338), Expect = 7e-30
 Identities = 60/97 (61%), Positives = 79/97 (81%)
 Frame = -2

Query: 297 VHGQLVHAMVIKDGYGFDVYVGNALINMYCVFAIMGDAHRVFDEMSNRDVFSWTSLVRGY 118
           ++G++VH MV+K G+  ++YVGN++INM  VFA M DA +VF++MS RDVFSWTSL+ GY
Sbjct: 195 IYGEIVHGMVVKSGFESNLYVGNSVINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGY 254

Query: 117 AKRGDMDRACEIFGLMPTYNEVSWTVMISGFVGNERY 7
           AK G+MDRACE+F +MP  N+VSW VMISGF+G  RY
Sbjct: 255 AKHGEMDRACELFNMMPVRNDVSWAVMISGFLGCGRY 291


>ref|XP_002280289.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 663

 Score =  126 bits (316), Expect = 2e-27
 Identities = 55/98 (56%), Positives = 77/98 (78%)
 Frame = -2

Query: 294 HGQLVHAMVIKDGYGFDVYVGNALINMYCVFAIMGDAHRVFDEMSNRDVFSWTSLVRGYA 115
           +G+ VH MV+KDGY  D++VGN+L+NMY +F+ M DA RVFDEM  RDV +WTS+V+GYA
Sbjct: 175 YGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEMPQRDVITWTSVVKGYA 234

Query: 114 KRGDMDRACEIFGLMPTYNEVSWTVMISGFVGNERYTK 1
            RG++ RA E+F +MP  N+VSW VM++G+VG+  Y +
Sbjct: 235 MRGELVRARELFDMMPGRNDVSWAVMVAGYVGHRFYNE 272


>ref|XP_002301427.1| predicted protein [Populus trichocarpa] gi|222843153|gb|EEE80700.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  106 bits (264), Expect = 3e-21
 Identities = 48/99 (48%), Positives = 69/99 (69%)
 Frame = -2

Query: 297 VHGQLVHAMVIKDGYGFDVYVGNALINMYCVFAIMGDAHRVFDEMSNRDVFSWTSLVRGY 118
           +HG+++H   IK G+ FDVY   AL++MY    ++  A +VFDEM+ RD+ +W SL+ GY
Sbjct: 27  LHGKVIHTHFIKSGFDFDVYALTALVDMYAKLGVLMLARQVFDEMTVRDIPTWNSLIAGY 86

Query: 117 AKRGDMDRACEIFGLMPTYNEVSWTVMISGFVGNERYTK 1
           ++ GDM+ A E+F LMP+ + VSWT MISG+  N  YTK
Sbjct: 87  SRSGDMEGALELFKLMPSRSVVSWTTMISGYSQNGMYTK 125


>ref|XP_002523296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223537384|gb|EEF39012.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 353

 Score =  100 bits (250), Expect = 1e-19
 Identities = 47/99 (47%), Positives = 65/99 (65%)
 Frame = -2

Query: 297 VHGQLVHAMVIKDGYGFDVYVGNALINMYCVFAIMGDAHRVFDEMSNRDVFSWTSLVRGY 118
           +H Q++H    K G+  DV    AL++MYC   ++  AHRVFDE+  RD+ +W +L+ GY
Sbjct: 99  LHAQMLHTHFKKSGFESDVIALTALVDMYCKLGMVAFAHRVFDEIPVRDIPTWNALIAGY 158

Query: 117 AKRGDMDRACEIFGLMPTYNEVSWTVMISGFVGNERYTK 1
           ++ GDM+ A +IF LMP  N VSWT MISG+  N RY K
Sbjct: 159 SRCGDMEGALKIFKLMPDRNVVSWTAMISGYSQNGRYAK 197


>ref|XP_003633947.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g08510-like [Vitis vinifera]
          Length = 512

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 43/97 (44%), Positives = 64/97 (65%)
 Frame = -2

Query: 291 GQLVHAMVIKDGYGFDVYVGNALINMYCVFAIMGDAHRVFDEMSNRDVFSWTSLVRGYAK 112
           G+++H   +K G+G DV+   AL++MY    ++  A + FDEM+ RDV +W S++ GYA+
Sbjct: 101 GRMLHTHFVKSGFGCDVFALTALVDMYAKLGLLSLARKQFDEMTVRDVPTWNSMIAGYAR 160

Query: 111 RGDMDRACEIFGLMPTYNEVSWTVMISGFVGNERYTK 1
            GD++ A E+F LMP  N  SWT MISG+  N +Y K
Sbjct: 161 CGDLEGALELFRLMPARNVTSWTAMISGYAQNGQYAK 197