BLASTX nr result

ID: Bupleurum21_contig00029877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029877
         (469 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like pr...   120   9e-26
emb|CAN69561.1| hypothetical protein VITISV_040028 [Vitis vinifera]   120   2e-25
ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus commu...   109   3e-22
ref|XP_003522278.1| PREDICTED: uncharacterized protein LOC100777...    97   1e-18
ref|XP_003525436.1| PREDICTED: uncharacterized protein LOC100817...    95   5e-18

>ref|XP_002265203.1| PREDICTED: squamosa promoter-binding-like protein 6-like [Vitis
           vinifera]
          Length = 557

 Score =  120 bits (302), Expect = 9e-26
 Identities = 66/121 (54%), Positives = 85/121 (70%), Gaps = 2/121 (1%)
 Frame = -1

Query: 466 YPMIIPGSHEH-NVAQVSEKLLGMSPQASNIDMTNKFISSGINSVD-NHLNQMITTSGSS 293
           +P+I+PG H H N+AQVSEK LG+SPQ S   + NKF+SSG+NS + NHL  ++ +  S 
Sbjct: 434 HPLIMPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNKFLSSGMNSAEGNHLGPILISDCSE 493

Query: 292 AVINYGIDGMFHGSDYMSGGGKEHFSCEDGPTIDLLQLSSQLQRVEDQRQSLHKKPVNDS 113
            V     DG+F GSD+++   K+   CE GPTIDLLQLSSQL RVE QRQS+H K  ND+
Sbjct: 494 PVNFEVTDGIFQGSDFVNT--KDCLPCETGPTIDLLQLSSQLHRVEHQRQSIHVKQENDT 551

Query: 112 F 110
           F
Sbjct: 552 F 552


>emb|CAN69561.1| hypothetical protein VITISV_040028 [Vitis vinifera]
          Length = 686

 Score =  120 bits (300), Expect = 2e-25
 Identities = 66/121 (54%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
 Frame = -1

Query: 466 YPMIIPGSHEH-NVAQVSEKLLGMSPQASNIDMTNKFISSGINSVD-NHLNQMITTSGSS 293
           +P+I PG H H N+AQVSEK LG+SPQ S   + NKF+SSG+NS + NHL  ++ +  S 
Sbjct: 563 HPLIXPGCHAHYNIAQVSEKFLGVSPQVSMSRVPNKFLSSGMNSAEGNHLGPILISDCSE 622

Query: 292 AVINYGIDGMFHGSDYMSGGGKEHFSCEDGPTIDLLQLSSQLQRVEDQRQSLHKKPVNDS 113
            V     DG+F GSD+++   K+   CE GPTIDLLQLSSQL RVE QRQS+H K  ND+
Sbjct: 623 PVNFEVTDGIFQGSDFVNT--KDCLPCETGPTIDLLQLSSQLHRVEHQRQSIHVKQENDT 680

Query: 112 F 110
           F
Sbjct: 681 F 681


>ref|XP_002514625.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223546229|gb|EEF47731.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 557

 Score =  109 bits (272), Expect = 3e-22
 Identities = 62/122 (50%), Positives = 85/122 (69%), Gaps = 2/122 (1%)
 Frame = -1

Query: 469 AYPMIIPGSHEH-NVAQVSEKLLGMSPQASNIDMTNKFISSGINSVD-NHLNQMITTSGS 296
           A P+++PG   H +V+QVSEKL+G+S QAS   M NKF SSG +S + + L  ++ + GS
Sbjct: 432 ACPLVLPGRSSHYSVSQVSEKLVGISSQASAGAMQNKFSSSGTSSAEGSRLGSILLSDGS 491

Query: 295 SAVINYGIDGMFHGSDYMSGGGKEHFSCEDGPTIDLLQLSSQLQRVEDQRQSLHKKPVND 116
            A+     DGM+ GS++M+   K+  SCEDG TIDLLQLSSQL+RVE Q+QS+  K  ND
Sbjct: 492 DAINFVIADGMYQGSNFMNA--KDCLSCEDGTTIDLLQLSSQLERVERQKQSMQVKQEND 549

Query: 115 SF 110
           +F
Sbjct: 550 AF 551


>ref|XP_003522278.1| PREDICTED: uncharacterized protein LOC100777766 [Glycine max]
          Length = 567

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 59/121 (48%), Positives = 84/121 (69%), Gaps = 2/121 (1%)
 Frame = -1

Query: 469 AYPMIIPGSHEH-NVAQVSEKLLGMSPQASNIDMTNKFISSGINSVDNHLNQMITTSGSS 293
           A+PM+IP SH H N+++VSEK++G+S QAS+  ++++F     N VD      I  S ++
Sbjct: 444 AHPMVIPSSHSHYNMSRVSEKMIGISSQASS-GVSDRFPPE-FNPVDGSHLSPILISDNN 501

Query: 292 AVINYGI-DGMFHGSDYMSGGGKEHFSCEDGPTIDLLQLSSQLQRVEDQRQSLHKKPVND 116
            +IN+ + +G+F GSD+++   K+  SCED  TIDLLQLSSQLQRVE+QR SL  K  ND
Sbjct: 502 EIINFEMANGIFQGSDFVNV--KDRLSCEDSLTIDLLQLSSQLQRVENQRLSLQVKQEND 559

Query: 115 S 113
           S
Sbjct: 560 S 560


>ref|XP_003525436.1| PREDICTED: uncharacterized protein LOC100817547 [Glycine max]
          Length = 553

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 57/122 (46%), Positives = 85/122 (69%), Gaps = 3/122 (2%)
 Frame = -1

Query: 469 AYPMIIPGSHEHN--VAQVSEKLLGMSPQASNIDMTNKFISSGINSVDNHLNQMITTSGS 296
           A+ ++IP SH HN  ++QVSEK+ G+S Q S+  +++ F S   ++  +HL+ ++  S +
Sbjct: 429 AHSLVIPSSHSHNYNMSQVSEKI-GISSQTSSSRVSDSFPSELNHADGSHLSPVLI-SDN 486

Query: 295 SAVINYGI-DGMFHGSDYMSGGGKEHFSCEDGPTIDLLQLSSQLQRVEDQRQSLHKKPVN 119
           + ++N+ + DG+F  SDY++   K+H S EDG TIDLLQLSSQLQRVE +RQSL  K  N
Sbjct: 487 NCIVNFDMADGIFQASDYLNV--KDHLSGEDGATIDLLQLSSQLQRVEHERQSLQVKQEN 544

Query: 118 DS 113
           DS
Sbjct: 545 DS 546


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