BLASTX nr result

ID: Bupleurum21_contig00029855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029855
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003558215.1| PREDICTED: histone H2A-like [Brachypodium di...   156   2e-36
ref|XP_003578017.1| PREDICTED: histone H2A-like isoform 1 [Brach...   155   4e-36
ref|XP_002459460.1| hypothetical protein SORBIDRAFT_02g004970 [S...   154   7e-36
ref|XP_003607007.1| Histone H2A [Medicago truncatula] gi|1089360...   154   9e-36
ref|XP_002973018.1| hypothetical protein SELMODRAFT_413414 [Sela...   153   1e-35

>ref|XP_003558215.1| PREDICTED: histone H2A-like [Brachypodium distachyon]
          Length = 161

 Score =  156 bits (394), Expect = 2e-36
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = -2

Query: 272 STTRSARAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYMAAVLEYLSAEILELAGNAARDN 93
           S TRS RAGLQFPVGRIGRYLK GRYA+RVGTGAPVYMAAVLEYL+AE+LELAGNAARDN
Sbjct: 27  SVTRSVRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYMAAVLEYLAAEVLELAGNAARDN 86

Query: 92  KKTRIIPRHLLLAIKNDDEFTKLLRGVTIA 3
           KK+RIIPRH+LLA++NDDE  KLL GVTIA
Sbjct: 87  KKSRIIPRHVLLAVRNDDELGKLLAGVTIA 116


>ref|XP_003578017.1| PREDICTED: histone H2A-like isoform 1 [Brachypodium distachyon]
           gi|357158106|ref|XP_003578018.1| PREDICTED: histone
           H2A-like isoform 2 [Brachypodium distachyon]
          Length = 154

 Score =  155 bits (391), Expect = 4e-36
 Identities = 77/90 (85%), Positives = 84/90 (93%)
 Frame = -2

Query: 272 STTRSARAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYMAAVLEYLSAEILELAGNAARDN 93
           S TRS +AGLQFPVGRIGRYLK GRYA+RVG+GAPVY+AAVLEYL+AE+LELAGNAARDN
Sbjct: 27  SVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGSGAPVYLAAVLEYLAAELLELAGNAARDN 86

Query: 92  KKTRIIPRHLLLAIKNDDEFTKLLRGVTIA 3
           KKTRIIPRHLLLAI+NDDE  KLL GVTIA
Sbjct: 87  KKTRIIPRHLLLAIRNDDELGKLLAGVTIA 116


>ref|XP_002459460.1| hypothetical protein SORBIDRAFT_02g004970 [Sorghum bicolor]
           gi|241922837|gb|EER95981.1| hypothetical protein
           SORBIDRAFT_02g004970 [Sorghum bicolor]
          Length = 159

 Score =  154 bits (389), Expect = 7e-36
 Identities = 76/90 (84%), Positives = 84/90 (93%)
 Frame = -2

Query: 272 STTRSARAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYMAAVLEYLSAEILELAGNAARDN 93
           S TRS +AGLQFPVGRIGRYLK GRYA+RVGTGAPVY+AAVLEYL+AE+LELAGNAARDN
Sbjct: 29  SVTRSVKAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 88

Query: 92  KKTRIIPRHLLLAIKNDDEFTKLLRGVTIA 3
           KKTRIIPRH+LLAI+ND+E  KLL GVTIA
Sbjct: 89  KKTRIIPRHVLLAIRNDEELGKLLAGVTIA 118


>ref|XP_003607007.1| Histone H2A [Medicago truncatula]
           gi|108936003|sp|Q1S053.1|H2A3_MEDTR RecName:
           Full=Probable histone H2A.3 gi|355508062|gb|AES89204.1|
           Histone H2A [Medicago truncatula]
          Length = 152

 Score =  154 bits (388), Expect = 9e-36
 Identities = 76/90 (84%), Positives = 83/90 (92%)
 Frame = -2

Query: 272 STTRSARAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYMAAVLEYLSAEILELAGNAARDN 93
           S TRS RAGLQFPVGRIGRYLK GRYA+RVGTGAPVY+AAVLEYL+AE+LELAGNAARDN
Sbjct: 24  SVTRSIRAGLQFPVGRIGRYLKKGRYAQRVGTGAPVYLAAVLEYLAAEVLELAGNAARDN 83

Query: 92  KKTRIIPRHLLLAIKNDDEFTKLLRGVTIA 3
           KK RIIPRHLLLA++ND+E  KLL GVTIA
Sbjct: 84  KKNRIIPRHLLLAVRNDEELGKLLAGVTIA 113


>ref|XP_002973018.1| hypothetical protein SELMODRAFT_413414 [Selaginella moellendorffii]
           gi|300159619|gb|EFJ26239.1| hypothetical protein
           SELMODRAFT_413414 [Selaginella moellendorffii]
          Length = 136

 Score =  153 bits (387), Expect = 1e-35
 Identities = 74/90 (82%), Positives = 85/90 (94%)
 Frame = -2

Query: 272 STTRSARAGLQFPVGRIGRYLKNGRYAKRVGTGAPVYMAAVLEYLSAEILELAGNAARDN 93
           S ++SARAGLQFPVGR+ RYLKNGRYAKRVG+GAPVY+AAVLEYL+AE+LELAGNAARDN
Sbjct: 13  SVSKSARAGLQFPVGRLARYLKNGRYAKRVGSGAPVYLAAVLEYLAAEVLELAGNAARDN 72

Query: 92  KKTRIIPRHLLLAIKNDDEFTKLLRGVTIA 3
           KKTRIIPRH+ LA++NDDE  KLL+GVTIA
Sbjct: 73  KKTRIIPRHIQLAVRNDDELGKLLQGVTIA 102


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