BLASTX nr result

ID: Bupleurum21_contig00029839 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029839
         (561 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525457.1| leucine-rich repeat containing protein, puta...   176   3e-42
ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichoca...   173   1e-41
ref|XP_002527842.1| leucine-rich repeat containing protein, puta...   166   2e-39
emb|CBI28600.3| unnamed protein product [Vitis vinifera]              164   9e-39
ref|XP_002271203.1| PREDICTED: putative disease resistance prote...   164   9e-39

>ref|XP_002525457.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223535270|gb|EEF36947.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 1177

 Score =  176 bits (445), Expect = 3e-42
 Identities = 85/179 (47%), Positives = 120/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   SEEDSWALFKQRAFSHGGVIETEAFATLGKRMVARCSGLPLAIKTLGGLLHSKKSEQEWL 182
           SE+D W LF +RAF  GG  ET     +GK +V +C G PLA+ TLG L+HS++ EQEW+
Sbjct: 329 SEDDCWTLFSKRAFGIGGAEETPRMVAIGKEIVKKCGGNPLAVNTLGSLMHSRRDEQEWI 388

Query: 183 MIQNSDIWK----SKGVLPSLRLSYDNLPYSSLKRCFAYFSIMPKDSHIYKDELVRTWMA 350
            ++++++WK      G+LP+LR+SY++LP S LKRCFAY ++ PKD  I KD L++ W+A
Sbjct: 389 YVKDNELWKLPQECDGILPALRISYNHLP-SYLKRCFAYAAVFPKDYEINKDRLIQMWIA 447

Query: 351 LGFLLPTKDSNVLLEDVGNEYFNILLWNSLLQDVERDEYGNITYCKMHDLVHDLALCVS 527
            G L+   + +  LED+GN YF  L+W S  Q     E G+I  CK+HDL+HDLA  V+
Sbjct: 448 EG-LVEISNCDEKLEDMGNTYFKYLVWRSFFQVARECEDGSIISCKIHDLMHDLAQFVA 505


>ref|XP_002336466.1| nbs-lrr resistance protein [Populus trichocarpa]
           gi|222835078|gb|EEE73527.1| nbs-lrr resistance protein
           [Populus trichocarpa]
          Length = 1009

 Score =  173 bits (439), Expect = 1e-41
 Identities = 94/187 (50%), Positives = 122/187 (65%), Gaps = 3/187 (1%)
 Frame = +3

Query: 3   SEEDSWALFKQRAFSHGGVIETEAFATLGKRMVARCSGLPLAIKTLGGLLHSKKSEQEWL 182
           S++  W + KQ+    GG      F ++GK +  +C G+PL  K LGG LH K++ QEW 
Sbjct: 300 SDDQCWFIIKQKVSRGGGTTIASDFESIGKEIAKKCGGIPLLAKILGGTLHGKQA-QEWQ 358

Query: 183 MIQNSDIWKSKGV---LPSLRLSYDNLPYSSLKRCFAYFSIMPKDSHIYKDELVRTWMAL 353
            I NS IW S+     L  LRLS+D+L   +L++CFAY SI PKD  I ++EL++ WMA 
Sbjct: 359 SILNSRIWDSQDANKALRILRLSFDHLSSPALRKCFAYCSIFPKDFAIEREELIQLWMAE 418

Query: 354 GFLLPTKDSNVLLEDVGNEYFNILLWNSLLQDVERDEYGNITYCKMHDLVHDLALCVSSN 533
           GFL P   SN  +E++GN+YFN LL NS  QDVER+EY  +T CKMHDLVHDLAL VS  
Sbjct: 419 GFLGP---SNGRMENIGNKYFNDLLANSFFQDVERNEYEIVTRCKMHDLVHDLALQVSK- 474

Query: 534 YSSTITP 554
            S T+TP
Sbjct: 475 -SETLTP 480


>ref|XP_002527842.1| leucine-rich repeat containing protein, putative [Ricinus communis]
           gi|223532766|gb|EEF34545.1| leucine-rich repeat
           containing protein, putative [Ricinus communis]
          Length = 765

 Score =  166 bits (420), Expect = 2e-39
 Identities = 83/179 (46%), Positives = 121/179 (67%), Gaps = 4/179 (2%)
 Frame = +3

Query: 3   SEEDSWALFKQRAFSHGGVIETEAFATLGKRMVARCSGLPLAIKTLGGLLHSKKSEQEWL 182
           SE +SW+LFKQ AF  G  + + +   +GK +VA+C G PLAI+T+ G+L+ K +E EW 
Sbjct: 326 SEIESWSLFKQIAFKRGQ-LPSPSHEAIGKEIVAKCKGAPLAIRTIAGILYFKDAESEWE 384

Query: 183 MIQNSDIWK----SKGVLPSLRLSYDNLPYSSLKRCFAYFSIMPKDSHIYKDELVRTWMA 350
             +N ++ K       +LP+LRLSY+ LP S  K CFAY S+ PKD +I  +EL++ W+A
Sbjct: 385 AFKNKELSKVDQGENDILPTLRLSYNYLP-SHYKHCFAYCSLYPKDCNIKVEELIQCWIA 443

Query: 351 LGFLLPTKDSNVLLEDVGNEYFNILLWNSLLQDVERDEYGNITYCKMHDLVHDLALCVS 527
            G++  ++D+N  L+D+G EYF  L   S  Q+V++D YGNI  CKMHDL+HDLA+ V+
Sbjct: 444 QGYVKSSEDANHCLQDIGAEYFTDLFQRSFFQEVKKDTYGNIYTCKMHDLMHDLAVSVA 502


>emb|CBI28600.3| unnamed protein product [Vitis vinifera]
          Length = 949

 Score =  164 bits (415), Expect = 9e-39
 Identities = 89/185 (48%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
 Frame = +3

Query: 6   EEDSWALFKQRAFSHGGVIETEAFATLGKRMVARCSGLPLAIKTLGGLLHSKKSEQEWLM 185
           E+D W+LF+QRAF  G V +  +   +G  +V +C G+PLA KTLG L+  K+ + EW+ 
Sbjct: 197 EDDCWSLFEQRAFKLG-VPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREKSEWVD 255

Query: 186 IQNSDIWK----SKGVLPSLRLSYDNLPYSSLKRCFAYFSIMPKDSHIYKDELVRTWMAL 353
           +++S+IW       G+L  LRLSYD+LP S LK+CFAY SI PKD  I K+ LV+ WMA 
Sbjct: 256 VKDSEIWNLLGGENGILQVLRLSYDDLP-SHLKQCFAYCSIFPKDYCIEKENLVQLWMAE 314

Query: 354 GFLLPTKDSNVLLEDVGNEYFNILLWNSLLQDVERDEYGNITYCKMHDLVHDLALCVSSN 533
           GFL          E+VGNEYFN LLW S  ++V +D  GNI  C MH L HDLA  VS +
Sbjct: 315 GFL--PSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGS 372

Query: 534 YSSTI 548
             S +
Sbjct: 373 DCSAV 377


>ref|XP_002271203.1| PREDICTED: putative disease resistance protein RGA4-like [Vitis
           vinifera]
          Length = 1179

 Score =  164 bits (415), Expect = 9e-39
 Identities = 89/185 (48%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
 Frame = +3

Query: 6   EEDSWALFKQRAFSHGGVIETEAFATLGKRMVARCSGLPLAIKTLGGLLHSKKSEQEWLM 185
           E+D W+LF+QRAF  G V +  +   +G  +V +C G+PLA KTLG L+  K+ + EW+ 
Sbjct: 332 EDDCWSLFEQRAFKLG-VPKEASIVAIGNDIVKKCRGVPLAAKTLGSLMCFKREKSEWVD 390

Query: 186 IQNSDIWK----SKGVLPSLRLSYDNLPYSSLKRCFAYFSIMPKDSHIYKDELVRTWMAL 353
           +++S+IW       G+L  LRLSYD+LP S LK+CFAY SI PKD  I K+ LV+ WMA 
Sbjct: 391 VKDSEIWNLLGGENGILQVLRLSYDDLP-SHLKQCFAYCSIFPKDYCIEKENLVQLWMAE 449

Query: 354 GFLLPTKDSNVLLEDVGNEYFNILLWNSLLQDVERDEYGNITYCKMHDLVHDLALCVSSN 533
           GFL          E+VGNEYFN LLW S  ++V +D  GNI  C MH L HDLA  VS +
Sbjct: 450 GFL--PSSGRKAPEEVGNEYFNELLWRSFFENVTKDSDGNIVKCGMHHLFHDLARSVSGS 507

Query: 534 YSSTI 548
             S +
Sbjct: 508 DCSAV 512


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