BLASTX nr result

ID: Bupleurum21_contig00029813 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029813
         (441 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004146931.1| PREDICTED: putative B3 domain-containing pro...    63   2e-08
ref|XP_002866723.1| transcriptional factor B3 family protein [Ar...    61   8e-08
ref|XP_004167398.1| PREDICTED: putative B3 domain-containing pro...    59   3e-07
ref|XP_003622675.1| B3 domain-containing transcription factor VR...    59   3e-07
gb|ABD32483.2| Transcriptional factor B3 [Medicago truncatula]         59   3e-07

>ref|XP_004146931.1| PREDICTED: putative B3 domain-containing protein Os03g0621600-like
           [Cucumis sativus]
          Length = 346

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 33/112 (29%), Positives = 56/112 (50%)
 Frame = +3

Query: 63  LEMDSTTKSESFFSKYFNAPDREQRLRLPKAWSSKFGKRLPCSAYLMNRYGDFWIVNVAR 242
           LE + T  S  FF     +  RE++L++P  +   FGK L  S  L+   G  W V +  
Sbjct: 21  LEPEETNSSLQFFKIILPSSVREEKLKMPSKFIRMFGKELSSSVVLIVPNGGVWEVGL-- 78

Query: 243 EEKTKRFSFEEGWSQFVAYNKVEYKDKIVFRYDSMSTFHFKLFGKNNEEKEY 398
           E+   +  F   W++F+ Y  ++Y   ++F+Y+  S+FH  +F     E +Y
Sbjct: 79  EKFNGQIWFNHSWNKFIDYYSIDYGFLLIFKYEGNSSFHVLIFDTTTFEIQY 130


>ref|XP_002866723.1| transcriptional factor B3 family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297312558|gb|EFH42982.1| transcriptional
           factor B3 family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 332

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 34/111 (30%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
 Frame = +3

Query: 69  MDSTTKSESFFSKYFNAPDREQRLRLPKAWSSKFGKRLPCSAYLMNRYGDFWIVNVAREE 248
           ++ T   +  F K F        L +P A+     K LP  A+L++  G  W V    E+
Sbjct: 2   VEETAGKDLEFFKVFLPEFSSHELVIPPAFIDILDKELPKEAFLVDEIGRLWCVETKTED 61

Query: 249 KTKRFS--FEEGWSQFVAYNKVEYKDKIVFRYDSMSTFHFKLFGKNNEEKE 395
             +RF   F++GW  F     +E+ D +VFRYD  S F   +F K+  +K+
Sbjct: 62  TEERFCVLFKKGWESFANDQSLEFGDFLVFRYDGDSRFSVTIFAKDGCKKD 112


>ref|XP_004167398.1| PREDICTED: putative B3 domain-containing protein At5g66980-like
           [Cucumis sativus]
          Length = 309

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/101 (31%), Positives = 52/101 (51%)
 Frame = +3

Query: 99  FSKYFNAPDREQRLRLPKAWSSKFGKRLPCSAYLMNRYGDFWIVNVAREEKTKRFSFEEG 278
           F K F      Q + +P A+   F  R+P  A + ++ G+ W  +V  EE      F++G
Sbjct: 21  FFKVFLPNSSSQSMSIPPAFVKYFNGRIPSEAIIRDQSGNSW--HVTLEELKNIVLFKDG 78

Query: 279 WSQFVAYNKVEYKDKIVFRYDSMSTFHFKLFGKNNEEKEYI 401
           W +FV  + ++    +VF+YD    F  K+FGKN  +KE +
Sbjct: 79  WQEFVDSHHLKRGYFLVFQYDGSHVFDVKIFGKNGCKKELV 119


>ref|XP_003622675.1| B3 domain-containing transcription factor VRN1 [Medicago
           truncatula] gi|355497690|gb|AES78893.1| B3
           domain-containing transcription factor VRN1 [Medicago
           truncatula]
          Length = 341

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/87 (32%), Positives = 50/87 (57%)
 Frame = +3

Query: 138 LRLPKAWSSKFGKRLPCSAYLMNRYGDFWIVNVAREEKTKRFSFEEGWSQFVAYNKVEYK 317
           LR+P+ +  K+GK LP +  L    G  W +N+ + +   +  FE+GW QF  ++ + + 
Sbjct: 27  LRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDG--KIWFEKGWKQFAEHHSIGHG 84

Query: 318 DKIVFRYDSMSTFHFKLFGKNNEEKEY 398
             ++FRY+  S F  ++FGK+  E +Y
Sbjct: 85  HLLLFRYEKTSKFEVQIFGKSALEIDY 111


>gb|ABD32483.2| Transcriptional factor B3 [Medicago truncatula]
          Length = 329

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/87 (32%), Positives = 50/87 (57%)
 Frame = +3

Query: 138 LRLPKAWSSKFGKRLPCSAYLMNRYGDFWIVNVAREEKTKRFSFEEGWSQFVAYNKVEYK 317
           LR+P+ +  K+GK LP +  L    G  W +N+ + +   +  FE+GW QF  ++ + + 
Sbjct: 32  LRMPRKFVEKYGKGLPKAICLKTPNGAKWRLNLVKSDG--KIWFEKGWKQFAEHHSIGHG 89

Query: 318 DKIVFRYDSMSTFHFKLFGKNNEEKEY 398
             ++FRY+  S F  ++FGK+  E +Y
Sbjct: 90  HLLLFRYEKTSKFEVQIFGKSALEIDY 116


Top