BLASTX nr result

ID: Bupleurum21_contig00029803 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029803
         (421 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71579.1| hypothetical protein VITISV_003229 [Vitis vinifera]   111   5e-23
ref|XP_002273741.2| PREDICTED: uncharacterized protein LOC100266...   108   3e-22
emb|CBI30680.3| unnamed protein product [Vitis vinifera]              108   3e-22
ref|XP_002325693.1| predicted protein [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002522573.1| copper ion binding protein, putative [Ricinu...   103   1e-20

>emb|CAN71579.1| hypothetical protein VITISV_003229 [Vitis vinifera]
          Length = 174

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/139 (41%), Positives = 78/139 (56%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   RKALRRLKGVDNIEIDMGLQKVTVTGWADLEKVLKTARRNGRQAELWPAPGDPEFEN-VD 177
           RKAL++L G+D+I++DM +QKVTV GWAD +KVLK  R+ GR+AELWP P +PE+ N  D
Sbjct: 41  RKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKTGRKAELWPFPYNPEYYNYTD 100

Query: 178 HYYNNIDKHQYQYESSSHPTVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRPAQSTIM 357
            +Y N   H + +     P   +                            H+P  ST++
Sbjct: 101 QFYQNXYHHDHDHHRRRFPFAYS-----DSRPSSSYNYYKHGYNGHDHGYYHQPIHSTVI 155

Query: 358 DRQASAYFSDENTNACSIM 414
           D +A A FSDEN NACSIM
Sbjct: 156 DARAEAMFSDENPNACSIM 174


>ref|XP_002273741.2| PREDICTED: uncharacterized protein LOC100266966 [Vitis vinifera]
          Length = 150

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
 Frame = +1

Query: 1   RKALRRLKGVDNIEIDMGLQKVTVTGWADLEKVLKTARRNGRQAELWPAPGDPEFEN-VD 177
           RKAL++L G+D+I++DM +QKVTV GWAD +KVLK  R+ GR+AELWP P +PE+ N  D
Sbjct: 20  RKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKTGRKAELWPFPYNPEYYNYTD 79

Query: 178 HYYNNIDKHQYQYE-----SSSHPTVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRPA 342
            +Y N   H ++       S S P+                               H+P 
Sbjct: 80  QFYQNYYHHHHRRRFPFAYSDSRPSSS-------------YNYYKHGYNGHDHGYYHQPI 126

Query: 343 QSTIMDRQASAYFSDENTNACSIM 414
            ST++D +A A FSDEN NACSIM
Sbjct: 127 HSTVIDARAEAMFSDENPNACSIM 150


>emb|CBI30680.3| unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  108 bits (271), Expect = 3e-22
 Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 6/144 (4%)
 Frame = +1

Query: 1   RKALRRLKGVDNIEIDMGLQKVTVTGWADLEKVLKTARRNGRQAELWPAPGDPEFEN-VD 177
           RKAL++L G+D+I++DM +QKVTV GWAD +KVLK  R+ GR+AELWP P +PE+ N  D
Sbjct: 15  RKALQKLDGIDDIDVDMAMQKVTVMGWADQKKVLKAVRKTGRKAELWPFPYNPEYYNYTD 74

Query: 178 HYYNNIDKHQYQYE-----SSSHPTVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRPA 342
            +Y N   H ++       S S P+                               H+P 
Sbjct: 75  QFYQNYYHHHHRRRFPFAYSDSRPSSS-------------YNYYKHGYNGHDHGYYHQPI 121

Query: 343 QSTIMDRQASAYFSDENTNACSIM 414
            ST++D +A A FSDEN NACSIM
Sbjct: 122 HSTVIDARAEAMFSDENPNACSIM 145


>ref|XP_002325693.1| predicted protein [Populus trichocarpa] gi|222862568|gb|EEF00075.1|
           predicted protein [Populus trichocarpa]
          Length = 140

 Score =  103 bits (258), Expect = 1e-20
 Identities = 59/139 (42%), Positives = 76/139 (54%), Gaps = 1/139 (0%)
 Frame = +1

Query: 1   RKALRRLKGVDNIEIDMGLQKVTVTGWADLEKVLKTARRNGRQAELWPAPGDPEFENV-D 177
           + AL ++KGVD+I+IDMGLQKVTVTGWAD +KVLKT R+ GR+AELW  P +P+  +  D
Sbjct: 15  KNALEKVKGVDDIDIDMGLQKVTVTGWADQKKVLKTVRKTGRRAELWQLPYNPQHHSYSD 74

Query: 178 HYYNNIDKHQYQYESSSHPTVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRPAQSTIM 357
           HYYN   +HQ     + H    +                            H P  S+I 
Sbjct: 75  HYYN---QHQVNGPLTYHAPQPS----------SSYNYYKHGYDSNDHGYYHHPVHSSIF 121

Query: 358 DRQASAYFSDENTNACSIM 414
           + Q  A FSDEN + CSIM
Sbjct: 122 NHQTGAVFSDENPHGCSIM 140


>ref|XP_002522573.1| copper ion binding protein, putative [Ricinus communis]
           gi|223538264|gb|EEF39873.1| copper ion binding protein,
           putative [Ricinus communis]
          Length = 146

 Score =  103 bits (257), Expect = 1e-20
 Identities = 59/138 (42%), Positives = 76/138 (55%)
 Frame = +1

Query: 1   RKALRRLKGVDNIEIDMGLQKVTVTGWADLEKVLKTARRNGRQAELWPAPGDPEFENVDH 180
           +KAL++L GVD+I+IDM +QKVTV GWAD +KVLK  R+ GR+AELWP P +PE      
Sbjct: 18  KKALQKLDGVDDIDIDMTMQKVTVMGWADQKKVLKAVRKTGRRAELWPYPYNPE------ 71

Query: 181 YYNNIDKHQYQYESSSHPTVQTXXXXXXXXXXXXXXXXXXXXXXXXXXXIHRPAQSTIMD 360
           YYN   ++QYQ +  + P V                                P  S  +D
Sbjct: 72  YYNFKQQYQYQQQQETQPEV---TYYATQYSTSSYNYRKHGYSNEDYGYYQTPPYSMAVD 128

Query: 361 RQASAYFSDENTNACSIM 414
            QA+A FSDEN +ACSIM
Sbjct: 129 EQATAMFSDENPHACSIM 146


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