BLASTX nr result

ID: Bupleurum21_contig00029795 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029795
         (907 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis v...   270   4e-70
ref|XP_002513121.1| conserved hypothetical protein [Ricinus comm...   263   5e-68
ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cu...   261   1e-67
ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|2...   259   8e-67
ref|XP_003536745.1| PREDICTED: transmembrane protein 53-like [Gl...   254   2e-65

>ref|XP_002276066.1| PREDICTED: transmembrane protein 53 [Vitis vinifera]
          Length = 442

 Score =  270 bits (689), Expect = 4e-70
 Identities = 141/259 (54%), Positives = 185/259 (71%), Gaps = 3/259 (1%)
 Frame = -2

Query: 768 MGSLAGILQRPFLXXXXXXXXXVTTELHDKLKPSKLSDTDSSLEQSTSASHLCCEVVPSR 589
           MGS++GILQRP +         V+++L DKL+P K S+T S+L+    +     E   S 
Sbjct: 1   MGSMSGILQRPLIAATAVAVASVSSDLSDKLQPLKSSETSSTLKPICDSP--AQESKSSW 58

Query: 588 VSQLSVSKLSNLSFVTRIRVPVPHIRS-PVPITSQG-PXXXXXXXXXXXXXVLNIYNSAD 415
           VS +S+SKLSN SFV+R+RVPVPHI   PVP +  G               ++N+Y SA+
Sbjct: 59  VSHISLSKLSNFSFVSRVRVPVPHINYYPVPNSPSGFAPNLLSSSVVSSPTLINLYQSAE 118

Query: 414 LANA-KPAAYTASLPISSPSPDVLYKWHLPEPNTLDISKNTDCTLAKSRTVVVLLGWLGA 238
           LA A KP  +  S+P  + + DVLY+WHLP+PN  D+ +++DC+  KSRTVVVLLGWLGA
Sbjct: 119 LAKAPKPTTFKHSIP--ALASDVLYRWHLPDPNACDVLEDSDCSSVKSRTVVVLLGWLGA 176

Query: 237 KQRHLRRYAEYYTSRGFHVITFTFPMSEIVSYQAGGKAEEHVDMLVNHLSDWLEEEDDKN 58
           +Q+HL+RYAE YTS GFH ITFTFPM+E++SY+ GGKAE++VD+LVNHL++WLEEE  KN
Sbjct: 177 RQKHLKRYAELYTSMGFHAITFTFPMAEVLSYKVGGKAEQNVDLLVNHLAEWLEEEHGKN 236

Query: 57  LLFHTFSNTGWLTYGIILE 1
           L+FHTFSNTGWL YG ILE
Sbjct: 237 LVFHTFSNTGWLIYGAILE 255


>ref|XP_002513121.1| conserved hypothetical protein [Ricinus communis]
           gi|223548132|gb|EEF49624.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 440

 Score =  263 bits (671), Expect = 5e-68
 Identities = 144/259 (55%), Positives = 179/259 (69%), Gaps = 3/259 (1%)
 Frame = -2

Query: 768 MGSLAGILQRPFLXXXXXXXXXVTTELHDKLKPSKLSDTDSSLEQ-STSASHLCCEVVPS 592
           MGS +   QRP           +     DKL   K +D+ S+  +  +S S+   E   S
Sbjct: 1   MGSFSANFQRPIAAAAAVAVASLAP---DKLPSRKSNDSCSTSNRLDSSLSNSVQESSFS 57

Query: 591 RVSQLSVSKLSNLSFVTRIRVPVPHIRSPVPITSQG-PXXXXXXXXXXXXXVLNIYNSAD 415
            VS +SVSKL+NLSFVTRIRVPVP+    V  + Q  P              LN Y SA+
Sbjct: 58  WVSHISVSKLTNLSFVTRIRVPVPNTNFLVSNSIQKFPPNLLGSFIASSSPFLNSYQSAE 117

Query: 414 LANA-KPAAYTASLPISSPSPDVLYKWHLPEPNTLDISKNTDCTLAKSRTVVVLLGWLGA 238
           LA   +P A+T  +P S P  DVLY+WHLPEP+ +D+S ++DC+ AKSRTVVVLLGWLG+
Sbjct: 118 LAKGPQPTAFTNKIPTSPP--DVLYRWHLPEPDAIDVSGSSDCSSAKSRTVVVLLGWLGS 175

Query: 237 KQRHLRRYAEYYTSRGFHVITFTFPMSEIVSYQAGGKAEEHVDMLVNHLSDWLEEEDDKN 58
           KQ+HL++YAE+YTSRGFHVITFTFPMSEI+SYQ GGKAE+ +D+LVNHL+DWLEEE  KN
Sbjct: 176 KQKHLKKYAEWYTSRGFHVITFTFPMSEILSYQVGGKAEQDIDLLVNHLADWLEEEHGKN 235

Query: 57  LLFHTFSNTGWLTYGIILE 1
           L+FHTFSNTGWLTYG+ILE
Sbjct: 236 LVFHTFSNTGWLTYGVILE 254


>ref|XP_004149868.1| PREDICTED: transmembrane protein 53-like [Cucumis sativus]
          Length = 442

 Score =  261 bits (668), Expect = 1e-67
 Identities = 137/257 (53%), Positives = 175/257 (68%), Gaps = 1/257 (0%)
 Frame = -2

Query: 768 MGSLAGILQRPFLXXXXXXXXXVTTELHDKLKPSKLSDTDSSLEQSTSAS-HLCCEVVPS 592
           MGSL+GILQRPF+          +++  DKL   K ++  SS   S+ ++     E   S
Sbjct: 1   MGSLSGILQRPFVALTAVAVASFSSDFSDKLPSQKPTEASSSSSSSSDSTLDFLKESNTS 60

Query: 591 RVSQLSVSKLSNLSFVTRIRVPVPHIRSPVPITSQGPXXXXXXXXXXXXXVLNIYNSADL 412
            VS  SVSKL+NLSFVT+I  P+P  +   P +S                + N+Y SA L
Sbjct: 61  FVSHTSVSKLANLSFVTKIHAPIP--KFSFPSSSCNYVGNFPTSLVSSSVLSNLYQSAAL 118

Query: 411 ANAKPAAYTASLPISSPSPDVLYKWHLPEPNTLDISKNTDCTLAKSRTVVVLLGWLGAKQ 232
                 A   S  +SSP  +V+Y+WHLPEP +LDI+ ++ C++AKSRTVVVLLGWLGAKQ
Sbjct: 119 TKGSKQA-APSPKLSSPPSEVMYRWHLPEPTSLDITGSSACSVAKSRTVVVLLGWLGAKQ 177

Query: 231 RHLRRYAEYYTSRGFHVITFTFPMSEIVSYQAGGKAEEHVDMLVNHLSDWLEEEDDKNLL 52
           +HL+RYAE+YTSRGFH ITFTFPM+EI++YQ GGK E+H+D+LVNHL+DWLEEE  KNL+
Sbjct: 178 KHLKRYAEWYTSRGFHAITFTFPMAEILTYQLGGKVEQHIDLLVNHLADWLEEEHGKNLV 237

Query: 51  FHTFSNTGWLTYGIILE 1
           FHTFSNTGWLTYG ILE
Sbjct: 238 FHTFSNTGWLTYGAILE 254


>ref|XP_002306371.1| predicted protein [Populus trichocarpa] gi|222855820|gb|EEE93367.1|
           predicted protein [Populus trichocarpa]
          Length = 443

 Score =  259 bits (661), Expect = 8e-67
 Identities = 142/260 (54%), Positives = 187/260 (71%), Gaps = 4/260 (1%)
 Frame = -2

Query: 768 MGSLAGILQRPFLXXXXXXXXXVTTELHDKLKPSKLSDTDSSLEQSTSA-SHLCCEVVPS 592
           M SL+G+LQRP +         V+ +  DKL+  +  D+ S+ EQS+S  S+   +   S
Sbjct: 1   MSSLSGMLQRPVIAAAAAALASVSVDFSDKLQSFRSFDSCSTSEQSSSLLSNSVQDSNFS 60

Query: 591 RVSQLSVSKLSNLSFVTRIRVPVPHIRSPVPITSQGPXXXXXXXXXXXXXVL-NIYNSAD 415
            VS  SVSKL++ SFVTRI++PVP +   V   SQ               +L ++Y SA+
Sbjct: 61  WVSHSSVSKLASSSFVTRIQIPVPKLNFAVLDVSQNFVPSTLGFSVASSPLLVSLYQSAE 120

Query: 414 LANA-KPAAY-TASLPISSPSPDVLYKWHLPEPNTLDISKNTDCTLAKSRTVVVLLGWLG 241
           LA   KP+A+ T ++P SSP  D+LY+WHLPEP+T+D+S ++DC   KSRTVVVLLGWLG
Sbjct: 121 LAKGPKPSAFKTTNIPTSSP--DILYRWHLPEPSTIDVSGSSDCLSEKSRTVVVLLGWLG 178

Query: 240 AKQRHLRRYAEYYTSRGFHVITFTFPMSEIVSYQAGGKAEEHVDMLVNHLSDWLEEEDDK 61
           +KQ+HL++YAE+YTSRGFHVITFTFPM+EI+ YQ GGKAE+ +D+LVNHL+DWL EED K
Sbjct: 179 SKQKHLKKYAEWYTSRGFHVITFTFPMAEILCYQVGGKAEQDIDLLVNHLTDWL-EEDRK 237

Query: 60  NLLFHTFSNTGWLTYGIILE 1
           NL+FHTFSNTGWLTYG+ILE
Sbjct: 238 NLVFHTFSNTGWLTYGVILE 257


>ref|XP_003536745.1| PREDICTED: transmembrane protein 53-like [Glycine max]
          Length = 435

 Score =  254 bits (649), Expect = 2e-65
 Identities = 141/258 (54%), Positives = 179/258 (69%), Gaps = 2/258 (0%)
 Frame = -2

Query: 768 MGSLAGILQRPFLXXXXXXXXXVTTELHDKLKPSKLSDTDSSLEQSTSASHLCCEVVPSR 589
           M S +G +QRP +          + +L DKL PS+   T S L  ST  S+   +   S 
Sbjct: 1   MSSFSGAIQRPLVAAAAVAVASFSADLSDKL-PSRDCST-SDLAHSTPCSNTQ-KSDSSW 57

Query: 588 VSQLSVSKLSNLSFVTRIRVPVPHIRSPVPITSQGPXXXXXXXXXXXXXVL-NIYNSADL 412
           VS +S SKL+NLSFVTRI VPVPH++  VP                    L N+Y+SADL
Sbjct: 58  VSHISDSKLANLSFVTRIPVPVPHVQFRVPSLGHNCVSNLYHSSVASSPHLRNLYHSADL 117

Query: 411 AN-AKPAAYTASLPISSPSPDVLYKWHLPEPNTLDISKNTDCTLAKSRTVVVLLGWLGAK 235
              ++PAAY+  +  S+ S +V+YKWHLPEPN LD   ++ C+L KSRTVVVLLGWLGA+
Sbjct: 118 PRVSRPAAYSHGVSDSTTS-EVMYKWHLPEPNALD---DSSCSLTKSRTVVVLLGWLGAR 173

Query: 234 QRHLRRYAEYYTSRGFHVITFTFPMSEIVSYQAGGKAEEHVDMLVNHLSDWLEEEDDKNL 55
           QRHL++YAE+YTS+GFHV+TFTFPM EI+SYQ GGKAE++V +LV+HL+DWLE E DKNL
Sbjct: 174 QRHLKKYAEWYTSKGFHVVTFTFPMGEILSYQPGGKAEQNVHLLVDHLADWLEGESDKNL 233

Query: 54  LFHTFSNTGWLTYGIILE 1
           +FHTFSNTGWLTYG+ILE
Sbjct: 234 VFHTFSNTGWLTYGVILE 251


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