BLASTX nr result

ID: Bupleurum21_contig00029790 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029790
         (288 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|2...    92   6e-17
ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262...    87   1e-15
emb|CBI40456.3| unnamed protein product [Vitis vinifera]               87   1e-15
emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]    87   1e-15

>ref|XP_002301386.1| predicted protein [Populus trichocarpa] gi|222843112|gb|EEE80659.1|
           predicted protein [Populus trichocarpa]
          Length = 990

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/66 (66%), Positives = 51/66 (77%)
 Frame = -2

Query: 203 IKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIGEDVDGVLSMVDLVIYGSFFEDQ 24
           +K+IVLSGDST NYS AVE IA+ L YP GTVKH A+  DV   LS VDLVIYGSF E+Q
Sbjct: 379 LKIIVLSGDSTGNYSAAVEAIAVNLSYPRGTVKHFAVDGDVSSALSAVDLVIYGSFLEEQ 438

Query: 23  TFPDIL 6
           +FP+ L
Sbjct: 439 SFPEFL 444


>ref|XP_002320170.1| predicted protein [Populus trichocarpa] gi|222860943|gb|EEE98485.1|
           predicted protein [Populus trichocarpa]
          Length = 990

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 46/83 (55%), Positives = 57/83 (68%)
 Frame = -2

Query: 254 FVIFSWDHSVRDKMNFGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIGEDVDG 75
           F  FS D++ +  +    K+I+LSGD T NYSVAVE IA  L YP GTVKH A+ +DV  
Sbjct: 366 FAEFSLDNNSKSHL----KIIILSGDPTGNYSVAVEAIAANLSYPRGTVKHFAVDDDVGS 421

Query: 74  VLSMVDLVIYGSFFEDQTFPDIL 6
            L   DLVIYGSF E+Q+FP+IL
Sbjct: 422 PLGAADLVIYGSFLEEQSFPEIL 444


>ref|XP_002276292.2| PREDICTED: uncharacterized protein LOC100262009 [Vitis vinifera]
          Length = 1026

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 VRDKMNFGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIG-EDVDGVLSMVDLV 51
           V +  N  +K+++ SG+S  NYSVAVE IA+KL+YP G VKHIAI   + D VL+  D+V
Sbjct: 361 VDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADNVLAAADIV 420

Query: 50  IYGSFFEDQTFPDIL 6
           IYGSF E+Q+FPDIL
Sbjct: 421 IYGSFLEEQSFPDIL 435


>emb|CBI40456.3| unnamed protein product [Vitis vinifera]
          Length = 1026

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 VRDKMNFGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIG-EDVDGVLSMVDLV 51
           V +  N  +K+++ SG+S  NYSVAVE IA+KL+YP G VKHIAI   + D VL+  D+V
Sbjct: 361 VDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADNVLAAADIV 420

Query: 50  IYGSFFEDQTFPDIL 6
           IYGSF E+Q+FPDIL
Sbjct: 421 IYGSFLEEQSFPDIL 435


>emb|CAN69310.1| hypothetical protein VITISV_003086 [Vitis vinifera]
          Length = 1040

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
 Frame = -2

Query: 227 VRDKMNFGIKVIVLSGDSTRNYSVAVEMIAMKLKYPTGTVKHIAIG-EDVDGVLSMVDLV 51
           V +  N  +K+++ SG+S  NYSVAVE IA+KL+YP G VKHIAI   + D VL+  D+V
Sbjct: 375 VDNNSNSHLKILITSGNSANNYSVAVEAIALKLRYPKGVVKHIAIDVGEADNVLAAADIV 434

Query: 50  IYGSFFEDQTFPDIL 6
           IYGSF E+Q+FPDIL
Sbjct: 435 IYGSFLEEQSFPDIL 449


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