BLASTX nr result

ID: Bupleurum21_contig00029789 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029789
         (300 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
emb|CBI32852.3| unnamed protein product [Vitis vinifera]              116   2e-24
ref|XP_002283757.1| PREDICTED: metacaspase-9 [Vitis vinifera]         116   2e-24
ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|2...   113   2e-23
ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]       107   8e-22

>ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  120 bits (301), Expect = 1e-25
 Identities = 57/79 (72%), Positives = 68/79 (86%)
 Frame = +2

Query: 59  MEKGSNMKKMAVLVGCNYPNTPHELHGCINDVLSMQKTLVTRFGFDPTHIEILTDAPGSK 238
           ME G   K+MAVLVGCNYPNT +ELHGCINDVL+M++ LV RFGFD +H+++LTDAPGS 
Sbjct: 1   MEMGK--KRMAVLVGCNYPNTQNELHGCINDVLAMKEVLVKRFGFDASHVQLLTDAPGSV 58

Query: 239 VLPTGENIKKALGKMIDEA 295
           VLPTG NIK+ALG MID+A
Sbjct: 59  VLPTGANIKRALGHMIDQA 77


>emb|CBI32852.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +2

Query: 59  MEKGSNMKKMAVLVGCNYPNTPHELHGCINDVLSMQKTLVTRFGFDPTHIEILTDAPGSK 238
           ME+G   K+MAVLVGCNY NT +ELHGCINDVL+M++TLVTRFGF  +H+E+LTD PGS 
Sbjct: 1   MEEGK--KRMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSL 58

Query: 239 VLPTGENIKKALGKMIDEA 295
           V+PTG NIKKAL +M+D+A
Sbjct: 59  VMPTGANIKKALDRMVDQA 77


>ref|XP_002283757.1| PREDICTED: metacaspase-9 [Vitis vinifera]
          Length = 316

 Score =  116 bits (290), Expect = 2e-24
 Identities = 55/79 (69%), Positives = 68/79 (86%)
 Frame = +2

Query: 59  MEKGSNMKKMAVLVGCNYPNTPHELHGCINDVLSMQKTLVTRFGFDPTHIEILTDAPGSK 238
           ME+G   K+MAVLVGCNY NT +ELHGCINDVL+M++TLVTRFGF  +H+E+LTD PGS 
Sbjct: 1   MEEGK--KRMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSL 58

Query: 239 VLPTGENIKKALGKMIDEA 295
           V+PTG NIKKAL +M+D+A
Sbjct: 59  VMPTGANIKKALDRMVDQA 77


>ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1|
           predicted protein [Populus trichocarpa]
          Length = 315

 Score =  113 bits (282), Expect = 2e-23
 Identities = 53/72 (73%), Positives = 62/72 (86%)
 Frame = +2

Query: 80  KKMAVLVGCNYPNTPHELHGCINDVLSMQKTLVTRFGFDPTHIEILTDAPGSKVLPTGEN 259
           K+MAVLVGCNYPNT +ELHGCINDVL+M++ LV RFGFD   +++LTDAPGS VLPTG N
Sbjct: 6   KRMAVLVGCNYPNTRNELHGCINDVLTMKEVLVKRFGFDLRSVQLLTDAPGSVVLPTGAN 65

Query: 260 IKKALGKMIDEA 295
           IKKAL  MID+A
Sbjct: 66  IKKALSHMIDQA 77


>ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]
          Length = 322

 Score =  107 bits (268), Expect = 8e-22
 Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
 Frame = +2

Query: 59  MEKGSNMKKMAVLVGCNYPNTPHELHGCINDVLSMQKTLVTRFGFDPTHIEILTDAP-GS 235
           ME     K++AVLVGCNYPNT +ELHGCINDVL+M+ TL  RFGFDP++IE+LTDAP  S
Sbjct: 3   MEGQKKNKRVAVLVGCNYPNTSNELHGCINDVLAMKDTLEKRFGFDPSNIELLTDAPHSS 62

Query: 236 KVLPTGENIKKALGKMIDEA 295
             LPTG NIK+AL  M+D A
Sbjct: 63  NKLPTGANIKEALANMVDGA 82


Top