BLASTX nr result

ID: Bupleurum21_contig00029765 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029765
         (293 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535950.1| PREDICTED: guanine nucleotide-binding protei...    94   1e-17
ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protei...    94   2e-17
emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]    94   2e-17
ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyra...    88   6e-16
ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum] g...    87   1e-15

>ref|XP_003535950.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog
           [Glycine max]
          Length = 572

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 5/100 (5%)
 Frame = +1

Query: 1   MPPNRDAAEPMEATITSELGKKFNVNDVYGTESSFIASLKSAEDFASVEVPANGPVTFDE 180
           MPPNRD  EP EA I S+  K+FN+++VY +ESS+I SL S ++F +VEVP++ P+T DE
Sbjct: 392 MPPNRDQGEPSEANIVSDFSKEFNIDEVYSSESSYIGSLISVDNFNAVEVPSSHPLTLDE 451

Query: 181 KLVEDEKQ-----SGTSPGQNNDSDEPIAEDDACEKKAQT 285
            ++EDE Q      G  PG   + DE + EDD  + K  +
Sbjct: 452 MMLEDETQIKPAEQGEGPGNLAEVDESMEEDDVGKNKGNS 491


>ref|XP_002267566.1| PREDICTED: guanine nucleotide-binding protein-like 3 homolog [Vitis
           vinifera] gi|297744311|emb|CBI37281.3| unnamed protein
           product [Vitis vinifera]
          Length = 596

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
 Frame = +1

Query: 1   MPPNRDAAEPMEATITSELGKKFNVNDVYGTESSFIASLKSAEDFASVEVPANGPVTFDE 180
           MPP+R+  E +EATI SE GK+FN+++VY +ESSFI SLKS +DF  VE+P N P++FDE
Sbjct: 419 MPPSRNQGENLEATIVSEFGKEFNIDEVYNSESSFIGSLKSVDDFHPVELPPNSPLSFDE 478

Query: 181 KLVEDEKQSGTS----------PGQNNDSDEPIAEDDACEKKAQTA 288
           K++E + Q   S           G  +D    + ED A + KA+TA
Sbjct: 479 KMLEGDVQPQPSTQGDQEAKEMSGGGDDESMGVEEDAAGKTKAKTA 524


>emb|CAN64618.1| hypothetical protein VITISV_001358 [Vitis vinifera]
          Length = 593

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 49/106 (46%), Positives = 68/106 (64%), Gaps = 10/106 (9%)
 Frame = +1

Query: 1   MPPNRDAAEPMEATITSELGKKFNVNDVYGTESSFIASLKSAEDFASVEVPANGPVTFDE 180
           MPP+R+  E +EATI SE GK+FN+++VY +ESSFI SLKS +DF  VE+P N P++FDE
Sbjct: 414 MPPSRNQGENLEATIVSEFGKEFNIDEVYNSESSFIGSLKSVDDFHPVELPPNSPLSFDE 473

Query: 181 KLVEDEKQSGTS----------PGQNNDSDEPIAEDDACEKKAQTA 288
           K++E + Q   S           G  +D    + ED A + KA+TA
Sbjct: 474 KMLEGDVQPQPSTQGDQEAKEMSGGGDDESMGVEEDAAGKTKAKTA 519


>ref|XP_002884623.1| GTP-binding family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330463|gb|EFH60882.1| GTP-binding family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 582

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 41/81 (50%), Positives = 55/81 (67%)
 Frame = +1

Query: 1   MPPNRDAAEPMEATITSELGKKFNVNDVYGTESSFIASLKSAEDFASVEVPANGPVTFDE 180
           MPP RD     E+ I SEL K FN+++VY  ESSFI SLK+  +F  VEVP+NGP+ FDE
Sbjct: 405 MPPKRDQGGHAESKIVSELAKDFNIDEVYSGESSFIGSLKTVNEFNPVEVPSNGPLNFDE 464

Query: 181 KLVEDEKQSGTSPGQNNDSDE 243
            ++EDE ++ T     +DSD+
Sbjct: 465 TMIEDESKTETEEEPEHDSDD 485


>ref|NP_001234382.1| nuclear GTPase-like [Solanum lycopersicum]
           gi|83630757|gb|ABC26876.1| putative nuclear GTPase
           [Solanum lycopersicum]
          Length = 609

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 45/106 (42%), Positives = 64/106 (60%), Gaps = 9/106 (8%)
 Frame = +1

Query: 1   MPPNRDAAEPMEATITSELGKKFNVNDVYGTESSFIASLKSAEDFASVEVPANGPVTFDE 180
           +PP R+  E +E  I SE GK+FN+++VYG+ESS I SLKS  DF  VEVP+N PV FD+
Sbjct: 422 LPPTRNEGEHLEVKIVSEFGKEFNIDEVYGSESSIIGSLKSVNDFNPVEVPSNRPVIFDD 481

Query: 181 KLVEDEKQSGTSPGQN-------NDSDEPI--AEDDACEKKAQTAS 291
            ++ED  Q   +   N        + DEP+   E D  + + ++AS
Sbjct: 482 NMLEDNLQQPLAESDNATENLVSENGDEPMDSGEGDGAQTRGKSAS 527


Top