BLASTX nr result

ID: Bupleurum21_contig00029754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029754
         (521 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|2...    84   1e-14
ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago ...    83   2e-14
ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209...    75   7e-12
ref|XP_002870098.1| hypothetical protein ARALYDRAFT_493122 [Arab...    72   4e-11
ref|NP_193487.2| uncharacterized protein [Arabidopsis thaliana] ...    71   8e-11

>ref|XP_002303377.1| predicted protein [Populus trichocarpa] gi|222840809|gb|EEE78356.1|
           predicted protein [Populus trichocarpa]
          Length = 363

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 55/156 (35%), Positives = 84/156 (53%), Gaps = 33/156 (21%)
 Frame = +1

Query: 7   KFAIAEKMSSVQGMLP---KSSMTLLNDSTNKLSIETFKEMSKKAPYN------------ 141
           K  IA  +S  QG LP   +S +++L +S+ +  +    ++++K P              
Sbjct: 189 KLGIAPNLSIGQGALPMSLQSGVSMLTESSIQNPLGNITQLARKLPDQTSQSLYGYGNVS 248

Query: 142 -----------------GSRVEKAIDNFLHNPVLSGDDNNVPNVEMPGQNAERVQSEN-L 267
                            GSR EK I +FL NP+L  D  ++  +      A R++SEN +
Sbjct: 249 SHSSSESSTSKGSDTSFGSRTEKVISSFLQNPILKEDGTDINEL------AGRLRSENNM 302

Query: 268 LKMVLEHQQVIEELVKENRKLREIMVEDLKVSPGKL 375
           L+MVL HQQ+IEEL++EN+KLR+I+VEDLK+ P KL
Sbjct: 303 LQMVLRHQQIIEELMEENQKLRQILVEDLKIPPNKL 338


>ref|XP_003611374.1| hypothetical protein MTR_5g013280 [Medicago truncatula]
           gi|355512709|gb|AES94332.1| hypothetical protein
           MTR_5g013280 [Medicago truncatula]
          Length = 292

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 1/113 (0%)
 Frame = +1

Query: 112 KEMSKKAPYNGSRVEKAIDNFLHNPVLSGDDNNVPNVEMPGQNAERVQSEN-LLKMVLEH 288
           K+ S  + Y GSR EK ++NFL NP+L G+         P ++A R+ +EN +L+MVL+H
Sbjct: 187 KDTSVDSTY-GSRTEKVLNNFLQNPLLKGEGGG------PTESAGRLIAENKILQMVLKH 239

Query: 289 QQVIEELVKENRKLREIMVEDLKVSPGKLHCKXXXXXXXEGLGSDAENENNNS 447
           QQ+IEELV+EN KLR+I+V++LKV P KL                ++ ENNNS
Sbjct: 240 QQMIEELVEENEKLRQILVKELKVPPSKLEASSSDLYT-----RSSKRENNNS 287


>ref|XP_004148359.1| PREDICTED: uncharacterized protein LOC101209798 [Cucumis sativus]
           gi|449526614|ref|XP_004170308.1| PREDICTED:
           uncharacterized LOC101209798 [Cucumis sativus]
          Length = 310

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 48/141 (34%), Positives = 76/141 (53%), Gaps = 29/141 (20%)
 Frame = +1

Query: 40  QGMLP---KSSMTLLNDSTNKLSIETFKEMSKKAPYN----------------------- 141
           QG +P   +S+ ++ N S N+  I + ++++K+ P                         
Sbjct: 148 QGAIPVSLQSASSITNASENEHPIASIRKIAKEVPGTAPEDLSAYLDTKGSTLQNALSSR 207

Query: 142 --GSRVEKAIDNFLHNPVLSGDDNNVPNVEMPGQNAERVQSEN-LLKMVLEHQQVIEELV 312
             G+R EK ID+FL NPV  G+D  + +         R++ EN L +MV+ HQ++I+EL 
Sbjct: 208 SYGTRTEKVIDSFLQNPVFKGEDTELKD------EVGRLRLENHLFQMVIMHQKLIQELR 261

Query: 313 KENRKLREIMVEDLKVSPGKL 375
           +EN KLR+I+VEDLK+ P KL
Sbjct: 262 EENNKLRQILVEDLKIPPSKL 282


>ref|XP_002870098.1| hypothetical protein ARALYDRAFT_493122 [Arabidopsis lyrata subsp.
           lyrata] gi|297315934|gb|EFH46357.1| hypothetical protein
           ARALYDRAFT_493122 [Arabidopsis lyrata subsp. lyrata]
          Length = 291

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 45/118 (38%), Positives = 67/118 (56%), Gaps = 12/118 (10%)
 Frame = +1

Query: 58  SSMTLLNDSTNKLSIETFKEMSKKAPYN-----------GSRVEKAIDNFLHNPVLSGDD 204
           SS T + D  +       K M  KA +            G+R EK I++FL NP+L   D
Sbjct: 148 SSQTEIEDQVSPSVTGHKKHMDTKAAFKNSGSSTDSRTFGTRTEKVINSFLDNPILKQQD 207

Query: 205 NNVPNVEMPGQNAERVQSENL-LKMVLEHQQVIEELVKENRKLREIMVEDLKVSPGKL 375
                     Q   +++SE+L L++VL+HQ++I+E+++EN KLR I++EDLKVSP KL
Sbjct: 208 TTAVE-----QQVTQLESESLMLQVVLKHQKLIDEVMEENEKLRRIIIEDLKVSPEKL 260


>ref|NP_193487.2| uncharacterized protein [Arabidopsis thaliana]
           gi|20260466|gb|AAM13131.1| unknown protein [Arabidopsis
           thaliana] gi|28059310|gb|AAO30046.1| unknown protein
           [Arabidopsis thaliana] gi|332658508|gb|AEE83908.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 294

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = +1

Query: 142 GSRVEKAIDNFLHNPVLSGDDNNVPNVEMPGQNAERVQSENL-LKMVLEHQQVIEELVKE 318
           G+R EK I++FL NP+L   D          +   +++SE+L L+MVL+HQ++I+E+++E
Sbjct: 190 GTRTEKVINSFLDNPILKHQDTTAEE-----RQVTQLESESLMLQMVLKHQKLIDEVMEE 244

Query: 319 NRKLREIMVEDLKVSPGKL 375
           N KLR I++EDLKVSP KL
Sbjct: 245 NEKLRRIIIEDLKVSPEKL 263


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