BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029738
         (706 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containi...   263   2e-68
ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   230   2e-58
ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containi...   229   4e-58
ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|2...   221   8e-56
ref|NP_198787.1| pentatricopeptide repeat-containing protein [Ar...   218   9e-55

>ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  263 bits (673), Expect = 2e-68
 Identities = 131/209 (62%), Positives = 169/209 (80%), Gaps = 1/209 (0%)
 Frame = -3

Query: 626 DRAIAILKRHHPLDINSLSSQFTPQTTSYLLLQSQFDKPLILKILNWVRNYPFFDLNCKC 447
           D+AI +LK  HP  ++SLSS+FTPQ+ SY LL+SQFD+ L LK L W RN+PFFD +CKC
Sbjct: 35  DKAITLLK-FHPHHLDSLSSRFTPQSASYFLLKSQFDQTLTLKFLTWARNHPFFDSHCKC 93

Query: 446 ITLHILTRFKLYKTAQSLAESVAVDAAPNDDKGALVFQCLRDSYQTFKSSSSVFDLMVKA 267
           ++LHILTRFKLYKTAQ+LA+ +A+ A  +D  G+ +FQCL+DSY  + SSS+VFDLMVK+
Sbjct: 94  LSLHILTRFKLYKTAQTLAQELALSA--SDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKS 151

Query: 266 YSHLNMIDAALHTIVLAKSHGFMPSVLSYNWVLDSVISSCKTMGL-AEELYRDMIKTGVE 90
           YSHLNMID A++TI LAKS GFMP VLSYN VLD+++ S  ++ L AEE+YR+MI++ V 
Sbjct: 152 YSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVS 211

Query: 89  PNVFTYNILIRGFCAIREFDKGLGFYAEM 3
           PNV+TYNILIRGFC++ E  KGLG + EM
Sbjct: 212 PNVYTYNILIRGFCSVGELQKGLGCFGEM 240


>ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  230 bits (586), Expect = 2e-58
 Identities = 114/208 (54%), Positives = 155/208 (74%)
 Frame = -3

Query: 626 DRAIAILKRHHPLDINSLSSQFTPQTTSYLLLQSQFDKPLILKILNWVRNYPFFDLNCKC 447
           D+AI  L+RH P  +  LSS FTPQ +S LLL+SQFD  L+LK L+W R+  FF   CKC
Sbjct: 25  DKAIVYLRRH-PEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCKC 83

Query: 446 ITLHILTRFKLYKTAQSLAESVAVDAAPNDDKGALVFQCLRDSYQTFKSSSSVFDLMVKA 267
           + LHILTR+KLYKTAQSLAE V V+    D+ G  +FQCL++SY   KSSS+VFDL+VK+
Sbjct: 84  LALHILTRYKLYKTAQSLAEEVVVNTV--DETGEDLFQCLKNSYYQCKSSSAVFDLVVKS 141

Query: 266 YSHLNMIDAALHTIVLAKSHGFMPSVLSYNWVLDSVISSCKTMGLAEELYRDMIKTGVEP 87
            + +N+I+ AL  + LAKS+GFMP VLSYN +LD+VI + +++ +AE ++++M+++GV P
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 86  NVFTYNILIRGFCAIREFDKGLGFYAEM 3
           NV+TYNILIRGFC     + GL F+ EM
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLXFFGEM 229


>ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  229 bits (584), Expect = 4e-58
 Identities = 114/208 (54%), Positives = 155/208 (74%)
 Frame = -3

Query: 626 DRAIAILKRHHPLDINSLSSQFTPQTTSYLLLQSQFDKPLILKILNWVRNYPFFDLNCKC 447
           D+AI  L+RH P  +  LSS FTPQ +S LLL+SQFD  L+LK L+W R+  FF   CKC
Sbjct: 25  DKAIVYLRRH-PEQLTLLSSHFTPQASSNLLLKSQFDSSLVLKFLDWARSQQFFSFQCKC 83

Query: 446 ITLHILTRFKLYKTAQSLAESVAVDAAPNDDKGALVFQCLRDSYQTFKSSSSVFDLMVKA 267
           + LHILTR+KLYKTAQSLAE V V+    D+ G  +FQCL++SY   KSSS+VFDL+VK+
Sbjct: 84  LALHILTRYKLYKTAQSLAEEVVVNTV--DETGEDLFQCLKNSYYQCKSSSAVFDLVVKS 141

Query: 266 YSHLNMIDAALHTIVLAKSHGFMPSVLSYNWVLDSVISSCKTMGLAEELYRDMIKTGVEP 87
            + +N+I+ AL  + LAKS+GFMP VLSYN +LD+VI + +++ +AE ++++M+++GV P
Sbjct: 142 CARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSP 201

Query: 86  NVFTYNILIRGFCAIREFDKGLGFYAEM 3
           NV+TYNILIRGFC     + GL F+ EM
Sbjct: 202 NVYTYNILIRGFCTAGNLEMGLFFFGEM 229


>ref|XP_002313097.1| predicted protein [Populus trichocarpa] gi|222849505|gb|EEE87052.1|
           predicted protein [Populus trichocarpa]
          Length = 751

 Score =  221 bits (564), Expect = 8e-56
 Identities = 112/208 (53%), Positives = 156/208 (75%)
 Frame = -3

Query: 626 DRAIAILKRHHPLDINSLSSQFTPQTTSYLLLQSQFDKPLILKILNWVRNYPFFDLNCKC 447
           ++A+ +LKR+ P  +NS+SSQ TP+  SYLLLQ+Q D+ L LK +N+ + + FF+ +CKC
Sbjct: 25  EKALTLLKRY-PYHLNSISSQITPELASYLLLQTQNDRTLTLKFINFAKPHQFFNPHCKC 83

Query: 446 ITLHILTRFKLYKTAQSLAESVAVDAAPNDDKGALVFQCLRDSYQTFKSSSSVFDLMVKA 267
           I LHILT+FKLYKTAQ+LA+ +A ++   D+KG   FQCL+D+Y    SSS+VFDL+VK+
Sbjct: 84  IALHILTKFKLYKTAQNLAQDLAENSV--DEKGNYFFQCLKDTYFMCNSSSAVFDLVVKS 141

Query: 266 YSHLNMIDAALHTIVLAKSHGFMPSVLSYNWVLDSVISSCKTMGLAEELYRDMIKTGVEP 87
            S+LN I+ AL+ + LAK +GFMP VLSYN +LDS++   K +  AE++YR+MI +GV  
Sbjct: 142 CSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSL 201

Query: 86  NVFTYNILIRGFCAIREFDKGLGFYAEM 3
           NVF+YNILIRGFCA    + GL F+ EM
Sbjct: 202 NVFSYNILIRGFCAAGNLEMGLRFFEEM 229


>ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
           gi|10177971|dbj|BAB11377.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007083|gb|AED94466.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 747

 Score =  218 bits (555), Expect = 9e-55
 Identities = 112/208 (53%), Positives = 149/208 (71%)
 Frame = -3

Query: 626 DRAIAILKRHHPLDINSLSSQFTPQTTSYLLLQSQFDKPLILKILNWVRNYPFFDLNCKC 447
           D+A+  LKRH P  ++ LS+ FTP+  S LLL+SQ D+ LILK LNW   + FF L CKC
Sbjct: 26  DKALTFLKRH-PYQLHHLSANFTPEAASNLLLKSQNDQALILKFLNWANPHQFFTLRCKC 84

Query: 446 ITLHILTRFKLYKTAQSLAESVAVDAAPNDDKGALVFQCLRDSYQTFKSSSSVFDLMVKA 267
           ITLHILT+FKLYKTAQ LAE VA     +D+  +LVF+ L+++Y    S+SSVFDL+VK+
Sbjct: 85  ITLHILTKFKLYKTAQILAEDVAAKTL-DDEYASLVFKSLQETYDLCYSTSSVFDLVVKS 143

Query: 266 YSHLNMIDAALHTIVLAKSHGFMPSVLSYNWVLDSVISSCKTMGLAEELYRDMIKTGVEP 87
           YS L++ID AL  + LA++HGFMP VLSYN VLD+ I S + +  AE ++++M+++ V P
Sbjct: 144 YSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSP 203

Query: 86  NVFTYNILIRGFCAIREFDKGLGFYAEM 3
           NVFTYNILIRGFC     D  L  + +M
Sbjct: 204 NVFTYNILIRGFCFAGNIDVALTLFDKM 231