BLASTX nr result

ID: Bupleurum21_contig00029708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029708
         (318 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|2...    86   4e-15
ref|XP_002530980.1| conserved hypothetical protein [Ricinus comm...    85   7e-15

>ref|XP_002310063.1| predicted protein [Populus trichocarpa] gi|222852966|gb|EEE90513.1|
           predicted protein [Populus trichocarpa]
          Length = 687

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 56/105 (53%), Positives = 68/105 (64%), Gaps = 4/105 (3%)
 Frame = +2

Query: 14  SVSHKPTVSVSPQTNPESVCDRPKQTLPSTPLVSHKPVLSRVASTS----TKSVYNVVEK 181
           S S KP+ S SP+ +P S    P  +    P  S KP LS+V+  S    TK  Y  V+K
Sbjct: 183 SSSSKPSPS-SPKASPSS--PGPSSSSSKQP-PSFKPTLSQVSPDSIKEQTKVSYMWVQK 238

Query: 182 GSTPLYVVPEDIKDLIKRDTVPQVLRKPLSPETYKDYFAALLYAE 316
           G +P+Y +P+DI+DLIKRD VP VL KPLS  TYKDYFAALLYAE
Sbjct: 239 GMSPIYAIPKDIEDLIKRDKVPGVLNKPLSLSTYKDYFAALLYAE 283


>ref|XP_002306375.1| predicted protein [Populus trichocarpa] gi|222855824|gb|EEE93371.1|
           predicted protein [Populus trichocarpa]
          Length = 773

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 50/109 (45%), Positives = 63/109 (57%), Gaps = 4/109 (3%)
 Frame = +2

Query: 2   PTSHSVSHKPTVSVSPQTNPESVCDRPKQTLPSTPLVSHKPVLS----RVASTSTKSVYN 169
           P S S     +   SP + P       KQ        S KP LS     + +  TK  Y+
Sbjct: 263 PASSSKPSPSSSKASPSSRPGPSSSSSKQP------PSFKPTLSLASPNLINEQTKVSYS 316

Query: 170 VVEKGSTPLYVVPEDIKDLIKRDTVPQVLRKPLSPETYKDYFAALLYAE 316
           +V+K  +P+Y VP+DI+DLIKRD VP+VL + LSP TYKDYFAALLYAE
Sbjct: 317 LVQKVMSPIYAVPKDIEDLIKRDIVPEVLNEMLSPSTYKDYFAALLYAE 365


>ref|XP_002530980.1| conserved hypothetical protein [Ricinus communis]
           gi|223529456|gb|EEF31415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 710

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 52/108 (48%), Positives = 68/108 (62%), Gaps = 4/108 (3%)
 Frame = +2

Query: 5   TSHSVSHKPTVSVSPQTNPESVCDRPKQTLPSTPLVSHKPVL----SRVASTSTKSVYNV 172
           T  S + KP V+VSP++ P S   RP  +    P  S KP L    S +      + Y +
Sbjct: 211 TPASSASKP-VNVSPKSPPSST--RPSPSASKAP-PSFKPTLVPASSNLKDDQKIAHYIL 266

Query: 173 VEKGSTPLYVVPEDIKDLIKRDTVPQVLRKPLSPETYKDYFAALLYAE 316
           V+K  TP+Y++P+DI+ LIK D VP+VL+KPLS  TYKDYFAALLYAE
Sbjct: 267 VQKDITPIYMIPKDIESLIKSDKVPEVLKKPLSLSTYKDYFAALLYAE 314


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