BLASTX nr result

ID: Bupleurum21_contig00029700 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029700
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI25745.3| unnamed protein product [Vitis vinifera]              115   4e-24
ref|XP_003635042.1| PREDICTED: uncharacterized protein LOC100852...   115   4e-24
emb|CAN73305.1| hypothetical protein VITISV_023243 [Vitis vinifera]   115   4e-24
ref|XP_002308809.1| hypothetical protein POPTRDRAFT_417902 [Popu...   112   5e-23
ref|NP_001031128.1| uncharacterized protein [Arabidopsis thalian...   111   9e-23

>emb|CBI25745.3| unnamed protein product [Vitis vinifera]
          Length = 249

 Score =  115 bits (289), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +2

Query: 293 KLLRERDKF*DGSKNRIGAACSKRSIDVFQGQTAPLPSGIPTYTVDVHNICVSGKCNIAN 472
           KLL   D+   G+ NRIG  CSK +I +FQG T PLPSGIPTYTV + N+CV+G C+I+N
Sbjct: 132 KLLASPDE--GGAMNRIGGTCSKDNIVIFQGPTTPLPSGIPTYTVQILNVCVAG-CSISN 188

Query: 473 IHLSCGWFSTARTINPSVFRRVSYDDCL 556
           IH+ CGWFS+AR INP +FRR+ +DDCL
Sbjct: 189 IHVRCGWFSSARLINPRLFRRIFFDDCL 216


>ref|XP_003635042.1| PREDICTED: uncharacterized protein LOC100852626 [Vitis vinifera]
          Length = 189

 Score =  115 bits (289), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +2

Query: 293 KLLRERDKF*DGSKNRIGAACSKRSIDVFQGQTAPLPSGIPTYTVDVHNICVSGKCNIAN 472
           KLL   D+   G+ NRIG  CSK +I +FQG T PLPSGIPTYTV + N+CV+G C+I+N
Sbjct: 72  KLLASPDE--GGAMNRIGGTCSKDNIVIFQGPTTPLPSGIPTYTVQILNVCVAG-CSISN 128

Query: 473 IHLSCGWFSTARTINPSVFRRVSYDDCL 556
           IH+ CGWFS+AR INP +FRR+ +DDCL
Sbjct: 129 IHVRCGWFSSARLINPRLFRRIFFDDCL 156


>emb|CAN73305.1| hypothetical protein VITISV_023243 [Vitis vinifera]
          Length = 358

 Score =  115 bits (289), Expect = 4e-24
 Identities = 54/88 (61%), Positives = 68/88 (77%)
 Frame = +2

Query: 293 KLLRERDKF*DGSKNRIGAACSKRSIDVFQGQTAPLPSGIPTYTVDVHNICVSGKCNIAN 472
           KLL   D+   G+ NRIG  CSK +I +FQG T PLPSGIPTYTV + N+CV+G C+I+N
Sbjct: 176 KLLASPDE--GGAMNRIGGTCSKDNIVIFQGPTTPLPSGIPTYTVQILNVCVAG-CSISN 232

Query: 473 IHLSCGWFSTARTINPSVFRRVSYDDCL 556
           IH+ CGWFS+AR INP +FRR+ +DDCL
Sbjct: 233 IHVRCGWFSSARLINPRLFRRIFFDDCL 260


>ref|XP_002308809.1| hypothetical protein POPTRDRAFT_417902 [Populus trichocarpa]
           gi|222854785|gb|EEE92332.1| hypothetical protein
           POPTRDRAFT_417902 [Populus trichocarpa]
          Length = 100

 Score =  112 bits (279), Expect = 5e-23
 Identities = 49/69 (71%), Positives = 60/69 (86%)
 Frame = +2

Query: 350 ACSKRSIDVFQGQTAPLPSGIPTYTVDVHNICVSGKCNIANIHLSCGWFSTARTINPSVF 529
           ACSK  ID+ QG TAPLP+GIP+YTV + N+CVSG C+I+NIH+SCGWFS+A+ INPSVF
Sbjct: 1   ACSKDGIDIVQGSTAPLPNGIPSYTVQILNVCVSG-CSISNIHVSCGWFSSAKLINPSVF 59

Query: 530 RRVSYDDCL 556
           RR+ YDDCL
Sbjct: 60  RRIYYDDCL 68


>ref|NP_001031128.1| uncharacterized protein [Arabidopsis thaliana]
           gi|98961753|gb|ABF59206.1| unknown protein [Arabidopsis
           thaliana] gi|332193386|gb|AEE31507.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 179

 Score =  111 bits (277), Expect = 9e-23
 Identities = 56/102 (54%), Positives = 68/102 (66%)
 Frame = +2

Query: 251 RNFKRYKLKRRCYSKLLRERDKF*DGSKNRIGAACSKRSIDVFQGQTAPLPSGIPTYTVD 430
           R+F      R   S+ L       DG+ NRIG  CSK  I +FQG T PLPSG+P+YTV+
Sbjct: 47  RSFVSINENRTALSRKLLLSPDIGDGT-NRIGQDCSKDDIVLFQGSTNPLPSGVPSYTVE 105

Query: 431 VHNICVSGKCNIANIHLSCGWFSTARTINPSVFRRVSYDDCL 556
           + N CVS  CNIA IH+SCGWFS+ R +NP VFRR+ YDDCL
Sbjct: 106 IFNSCVSD-CNIAEIHVSCGWFSSVRLVNPRVFRRLDYDDCL 146


Top