BLASTX nr result

ID: Bupleurum21_contig00029686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029686
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279583.2| PREDICTED: uncharacterized protein LOC100265...   100   3e-19
emb|CBI16863.3| unnamed protein product [Vitis vinifera]              100   3e-19
emb|CAN63752.1| hypothetical protein VITISV_035052 [Vitis vinifera]   100   3e-19
ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus ...    91   1e-16
ref|XP_002309643.1| predicted protein [Populus trichocarpa] gi|2...    80   2e-13

>ref|XP_002279583.2| PREDICTED: uncharacterized protein LOC100265150 [Vitis vinifera]
          Length = 740

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 67/90 (74%)
 Frame = +1

Query: 1   IPKTKERAAAVRTEPIFLDVGGRAFWRLNGYSNKSNILVQDIGNGDDSIASGEKWVAYDD 180
           +PK K+R+ AVRTEP+ LDV G +FWRLNGYS + +IL+QD+G  D+ I   EKW +Y+ 
Sbjct: 577 VPKRKQRSDAVRTEPLLLDVNGHSFWRLNGYSGEPDILLQDMGTTDEGI-HDEKWFSYEL 635

Query: 181 EQEKMVEKHISFRDRMLRAQTVAEIVPSQT 270
            Q+K VE++ISFR++ LR  TV E +P ++
Sbjct: 636 GQKKSVEEYISFREKKLRLHTVTEKLPLES 665


>emb|CBI16863.3| unnamed protein product [Vitis vinifera]
          Length = 659

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 67/90 (74%)
 Frame = +1

Query: 1   IPKTKERAAAVRTEPIFLDVGGRAFWRLNGYSNKSNILVQDIGNGDDSIASGEKWVAYDD 180
           +PK K+R+ AVRTEP+ LDV G +FWRLNGYS + +IL+QD+G  D+ I   EKW +Y+ 
Sbjct: 544 VPKRKQRSDAVRTEPLLLDVNGHSFWRLNGYSGEPDILLQDMGTTDEGI-HDEKWFSYEL 602

Query: 181 EQEKMVEKHISFRDRMLRAQTVAEIVPSQT 270
            Q+K VE++ISFR++ LR  TV E +P ++
Sbjct: 603 GQKKSVEEYISFREKKLRLHTVTEKLPLES 632


>emb|CAN63752.1| hypothetical protein VITISV_035052 [Vitis vinifera]
          Length = 319

 Score = 99.8 bits (247), Expect = 3e-19
 Identities = 47/90 (52%), Positives = 67/90 (74%)
 Frame = +1

Query: 1   IPKTKERAAAVRTEPIFLDVGGRAFWRLNGYSNKSNILVQDIGNGDDSIASGEKWVAYDD 180
           +PK K+R+ AVRTEP+ LDV G +FWRLNGYS + +IL+QD+G  D+ I   EKW +Y+ 
Sbjct: 156 VPKRKQRSDAVRTEPLLLDVNGHSFWRLNGYSGEPDILLQDMGTTDEGI-HDEKWFSYEL 214

Query: 181 EQEKMVEKHISFRDRMLRAQTVAEIVPSQT 270
            Q+K VE++ISFR++ LR  TV E +P ++
Sbjct: 215 GQKKSVEEYISFREKKLRLHTVTEKLPLES 244


>ref|XP_002516741.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223544114|gb|EEF45639.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 687

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 50/96 (52%), Positives = 67/96 (69%), Gaps = 4/96 (4%)
 Frame = +1

Query: 1   IPKTKERAAAVRTEPIFLDVGGRAFWRLNGYSNKSNILVQDIGNGDDSIASGEKWVAYDD 180
           +PK ++R+ AVRT+PI LDV G AFWRL GY+ +S+IL+QD+GN   + A  EKW  YD 
Sbjct: 593 VPKKRQRSDAVRTDPILLDVNGHAFWRLKGYNGQSDILLQDMGNWTVA-APEEKWFVYDA 651

Query: 181 EQEKMVEKHI-SFRDRMLRAQTVA---EIVPSQTNV 276
           EQ++ VEK+I S R + LRAQ VA       S+TN+
Sbjct: 652 EQKQGVEKYISSLRTKRLRAQKVAGRPSYADSETNL 687


>ref|XP_002309643.1| predicted protein [Populus trichocarpa] gi|222855619|gb|EEE93166.1|
           predicted protein [Populus trichocarpa]
          Length = 570

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 38/63 (60%), Positives = 50/63 (79%)
 Frame = +1

Query: 28  AVRTEPIFLDVGGRAFWRLNGYSNKSNILVQDIGNGDDSIASGEKWVAYDDEQEKMVEKH 207
           AVRT+P+ LDV GRAFW+LNG+  +S IL+QD+G   +S+A  EKWVAY DEQ+  +EK+
Sbjct: 507 AVRTDPVLLDVDGRAFWKLNGHDGQSAILLQDMG-AWNSVAPSEKWVAYADEQKMDIEKY 565

Query: 208 ISF 216
           ISF
Sbjct: 566 ISF 568


Top