BLASTX nr result

ID: Bupleurum21_contig00029682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029682
         (445 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN72645.1| hypothetical protein VITISV_007503 [Vitis vinifera]    89   4e-16
emb|CAN79929.1| hypothetical protein VITISV_007487 [Vitis vinifera]    88   6e-16
ref|XP_002326099.1| predicted protein [Populus trichocarpa] gi|2...    84   2e-14
emb|CAN65701.1| hypothetical protein VITISV_039251 [Vitis vinifera]    83   3e-14
ref|XP_002319396.1| predicted protein [Populus trichocarpa] gi|2...    82   5e-14

>emb|CAN72645.1| hypothetical protein VITISV_007503 [Vitis vinifera]
          Length = 1000

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 53/133 (39%), Positives = 77/133 (57%), Gaps = 3/133 (2%)
 Frame = -2

Query: 393 YFFCTFLLCVCHLQYFCSGRNNITSGQWIYDNKLGEGIVSPGNIFQLGFFTPNGTTASKG 214
           +   T    +C + Y CS R+ IT   W+++   GE +VS G  F+LGFF P+G  +SK 
Sbjct: 8   HMLSTIFFVLCSVLY-CSARDTITREDWLWNG--GETVVSAGKTFELGFFNPDG--SSKI 62

Query: 213 GRYIGIWYRKS-PEVIVWVANREVLIPINE--SGKFGIDASGSLKVCDLNNTCTYFSTPL 43
           GR++GIWY  S P+ +VWVANR   +P+++  SG F I   G LK+ D N T  ++S+ +
Sbjct: 63  GRFVGIWYYMSKPQRVVWVANRTNPLPLSDPPSGVFAIKEDGELKLWDANGT-VHWSSDI 121

Query: 42  PDSPKSQSYSAKL 4
             S  S     KL
Sbjct: 122 GTSSSSTGRVVKL 134


>emb|CAN79929.1| hypothetical protein VITISV_007487 [Vitis vinifera]
          Length = 915

 Score = 88.2 bits (217), Expect = 6e-16
 Identities = 55/136 (40%), Positives = 79/136 (58%), Gaps = 3/136 (2%)
 Frame = -2

Query: 402 NTIYFFCTFLLCVCHLQYFCSGRNNITSGQWIYDNKLGEGIVSPGNIFQLGFFTPNGTTA 223
           +TI+FF   +L       +CS R+ IT   W+ +   G  +VS G  F+LGFF P+G  +
Sbjct: 17  STIFFFLCSVL-------YCSARDTITPENWLSNE--GGTLVSAGKTFELGFFNPDG--S 65

Query: 222 SKGGRYIGIWYRKS-PEVIVWVANREVLIPINE--SGKFGIDASGSLKVCDLNNTCTYFS 52
           SK GR++GIWY  S P+ +VWVANR+  +P+++  SG F I   G LKV D N T  ++S
Sbjct: 66  SKIGRFVGIWYYMSKPQRVVWVANRKNPLPLSDTPSGVFAIKEDGELKVLDANGT-VHWS 124

Query: 51  TPLPDSPKSQSYSAKL 4
           + +  S  S     KL
Sbjct: 125 SDIETSSSSTGRVVKL 140


>ref|XP_002326099.1| predicted protein [Populus trichocarpa] gi|222862974|gb|EEF00481.1|
           predicted protein [Populus trichocarpa]
          Length = 999

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/114 (42%), Positives = 72/114 (63%)
 Frame = -2

Query: 345 CSGRNNITSGQWIYDNKLGEGIVSPGNIFQLGFFTPNGTTASKGGRYIGIWYRKSPEVIV 166
           CS R+N+TS   + D ++G  +VS G  F+LGFFTP G   + G +Y+GI YR SP+ +V
Sbjct: 2   CSARDNMTSSTPLRD-EMGHTLVSSGERFELGFFTPYGR--NDGKKYLGIRYRYSPQTVV 58

Query: 165 WVANREVLIPINESGKFGIDASGSLKVCDLNNTCTYFSTPLPDSPKSQSYSAKL 4
           WVANRE  +  N  G F ++  G+L+V D N T +Y+S  +  +  S S++ +L
Sbjct: 59  WVANRENPLD-NSRGVFSLEQDGNLQVMDGNRT-SYWSARIESTSSSFSFTRRL 110


>emb|CAN65701.1| hypothetical protein VITISV_039251 [Vitis vinifera]
          Length = 915

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 49/104 (47%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
 Frame = -2

Query: 378 FLLCVCHLQYFCSGRNNITSGQWIYDNKLGEGIVSPGNIFQLGFFTPNGTTASKGGRYIG 199
           FL+ +C +  F S R+++T+G WI D+  G  +VS    F+LGFFTPNG+ +   GRY+G
Sbjct: 14  FLVVLCCVP-FSSARDSLTTGNWIEDD--GSTLVSMNGTFELGFFTPNGSFSK--GRYVG 68

Query: 198 IWYRKSPE-VIVWVANREVLIPIN-ESGKFGIDASGSLKVCDLN 73
           IWY K  E  +VWVANR+   P+N  S +FGI   G LK  D N
Sbjct: 69  IWYHKLKEKPVVWVANRDQ--PLNATSARFGIPPDGKLKAWDDN 110


>ref|XP_002319396.1| predicted protein [Populus trichocarpa] gi|222857772|gb|EEE95319.1|
           predicted protein [Populus trichocarpa]
          Length = 853

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 50/129 (38%), Positives = 76/129 (58%), Gaps = 1/129 (0%)
 Frame = -2

Query: 387 FCTFLLCVCHLQYFCSGRNNITSGQWIYDNKLGEGIVSPGNIFQLGFFTPNGTTASKGGR 208
           F  ++   C L   C   + +T    I D++ GE +VS G  F+LGFFTPNG+T     R
Sbjct: 6   FFLYVFLFCSLLLHCLAGDTLTRNSPIRDSR-GETLVSNGEKFELGFFTPNGSTER---R 61

Query: 207 YIGIW-YRKSPEVIVWVANREVLIPINESGKFGIDASGSLKVCDLNNTCTYFSTPLPDSP 31
           Y+GIW Y+ SP  +VWVANR+  + ++ SG F +D +G+L++ D     +++S  L + P
Sbjct: 62  YVGIWFYKSSPRTVVWVANRDNPL-LDHSGVFSVDENGNLQILD-GRGRSFWSINL-EKP 118

Query: 30  KSQSYSAKL 4
            S +  AKL
Sbjct: 119 SSMNRIAKL 127


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