BLASTX nr result

ID: Bupleurum21_contig00029675 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029675
         (629 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301092.1| predicted protein [Populus trichocarpa] gi|2...   223   2e-56
ref|XP_002307342.1| predicted protein [Populus trichocarpa] gi|2...   223   3e-56
ref|XP_002527373.1| conserved hypothetical protein [Ricinus comm...   221   1e-55
dbj|BAA97293.1| unnamed protein product [Arabidopsis thaliana]        220   2e-55
ref|XP_003558645.1| PREDICTED: uncharacterized protein At5g64816...   219   3e-55

>ref|XP_002301092.1| predicted protein [Populus trichocarpa] gi|222842818|gb|EEE80365.1|
           predicted protein [Populus trichocarpa]
          Length = 127

 Score =  223 bits (569), Expect = 2e-56
 Identities = 105/127 (82%), Positives = 114/127 (89%)
 Frame = -2

Query: 517 MVDWWWSVLGAAVPAIVGGQAWRMKNRRAEEQRLNSVRGREKSSDEIFVCERVCTSKRML 338
           MVD WWS+LGAA+PAI+ GQA RMK RRA+EQRL S RGREKSSDEIFVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAIIAGQALRMKKRRADEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 337 KKVGAFSKEPTPDTCVTVCGVSQLDACADACARTVCVNQHQVPNWNDTCLKRCQNECLRL 158
           KKVGA SK+PT DTCVTVCGVS+LDACADACARTVCVNQHQVPNWND CL+RCQ+ECLRL
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACADACARTVCVNQHQVPNWNDICLRRCQSECLRL 120

Query: 157 XXXSGTT 137
              S T+
Sbjct: 121 SNSSATS 127


>ref|XP_002307342.1| predicted protein [Populus trichocarpa]
           gi|224148058|ref|XP_002336584.1| predicted protein
           [Populus trichocarpa] gi|222836242|gb|EEE74663.1|
           predicted protein [Populus trichocarpa]
           gi|222856791|gb|EEE94338.1| predicted protein [Populus
           trichocarpa]
          Length = 127

 Score =  223 bits (567), Expect = 3e-56
 Identities = 103/120 (85%), Positives = 111/120 (92%)
 Frame = -2

Query: 517 MVDWWWSVLGAAVPAIVGGQAWRMKNRRAEEQRLNSVRGREKSSDEIFVCERVCTSKRML 338
           MVD WWS+LGAA+PAI+ GQA RMK RRA+EQRL S RGREKSSDEIFVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAIIAGQALRMKKRRADEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 337 KKVGAFSKEPTPDTCVTVCGVSQLDACADACARTVCVNQHQVPNWNDTCLKRCQNECLRL 158
           KKVGA SK+PT DTCVTVCGVS+LDACADACARTVCVNQHQVPNWND CL+RCQ+ECLRL
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACADACARTVCVNQHQVPNWNDICLRRCQSECLRL 120


>ref|XP_002527373.1| conserved hypothetical protein [Ricinus communis]
           gi|223533292|gb|EEF35045.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 127

 Score =  221 bits (562), Expect = 1e-55
 Identities = 101/120 (84%), Positives = 110/120 (91%)
 Frame = -2

Query: 517 MVDWWWSVLGAAVPAIVGGQAWRMKNRRAEEQRLNSVRGREKSSDEIFVCERVCTSKRML 338
           MVD WWS+LGAA+PA++ GQA RMK +RAEEQRL S RGREKSSDEIFVCERVCTSKRML
Sbjct: 1   MVDPWWSLLGAAIPAVIAGQAIRMKKKRAEEQRLKSARGREKSSDEIFVCERVCTSKRML 60

Query: 337 KKVGAFSKEPTPDTCVTVCGVSQLDACADACARTVCVNQHQVPNWNDTCLKRCQNECLRL 158
           KKVGA SK+PT DTCVTVCGVS+LDAC DACARTVCVNQHQVPNWND CL+RCQ+ECLRL
Sbjct: 61  KKVGALSKDPTIDTCVTVCGVSELDACTDACARTVCVNQHQVPNWNDVCLRRCQSECLRL 120


>dbj|BAA97293.1| unnamed protein product [Arabidopsis thaliana]
          Length = 651

 Score =  220 bits (560), Expect = 2e-55
 Identities = 97/121 (80%), Positives = 111/121 (91%)
 Frame = -2

Query: 520 KMVDWWWSVLGAAVPAIVGGQAWRMKNRRAEEQRLNSVRGREKSSDEIFVCERVCTSKRM 341
           KMV+ WWS++GAAVPA++ GQAWR+K R  EE+R+ S RGREKSSDEIFVCERVCTSKRM
Sbjct: 521 KMVEVWWSLIGAAVPALIAGQAWRIKKRHGEEERIKSARGREKSSDEIFVCERVCTSKRM 580

Query: 340 LKKVGAFSKEPTPDTCVTVCGVSQLDACADACARTVCVNQHQVPNWNDTCLKRCQNECLR 161
           LKKVGAFSK+P PDTCVTVCGVS+LDAC+DACARTVCVNQHQV NWND CL+RCQ+ECL+
Sbjct: 581 LKKVGAFSKDPIPDTCVTVCGVSELDACSDACARTVCVNQHQVANWNDICLRRCQSECLK 640

Query: 160 L 158
           L
Sbjct: 641 L 641


>ref|XP_003558645.1| PREDICTED: uncharacterized protein At5g64816-like [Brachypodium
           distachyon]
          Length = 125

 Score =  219 bits (558), Expect = 3e-55
 Identities = 101/120 (84%), Positives = 109/120 (90%)
 Frame = -2

Query: 517 MVDWWWSVLGAAVPAIVGGQAWRMKNRRAEEQRLNSVRGREKSSDEIFVCERVCTSKRML 338
           MVD WW +L AAVPAIV GQA R+K RR EEQRL + RGREKSSDE+FVCERVCTSKRML
Sbjct: 1   MVDAWWPLLAAAVPAIVAGQAIRVKRRRDEEQRLKAARGREKSSDEVFVCERVCTSKRML 60

Query: 337 KKVGAFSKEPTPDTCVTVCGVSQLDACADACARTVCVNQHQVPNWNDTCLKRCQNECLRL 158
           KKVGAFSK+P PDTCVTVCGVS+LDACADACARTVCVNQHQVPNWND CLKRCQ+ECL+L
Sbjct: 61  KKVGAFSKDPIPDTCVTVCGVSELDACADACARTVCVNQHQVPNWNDVCLKRCQSECLKL 120


Top