BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029672
         (396 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518871.1| conserved hypothetical protein [Ricinus comm...   100   9e-20
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...    89   3e-16
gb|ABA98898.1| retrotransposon protein, putative, unclassified [...    82   3e-14
ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding sub...    79   3e-13
gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japo...    78   8e-13

>ref|XP_002518871.1| conserved hypothetical protein [Ricinus communis]
           gi|223541858|gb|EEF43404.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 668

 Score =  100 bits (250), Expect = 9e-20
 Identities = 41/130 (31%), Positives = 69/130 (53%)
 Frame = -3

Query: 391 FWKNFWQLRVPPNVKDFNWRALSNCIPTKVQLQMKQVPLTSTACGFCDVYSETTTHCLLT 212
           FW  FW+L++P  V++  W+  SNCI T + L+M+ V L    C +C+   ET  H L  
Sbjct: 427 FWNKFWKLKIPTKVRNLMWKICSNCIRTAMNLRMRYVDL-DPLCKWCNREPETLFHVLFG 485

Query: 211 CEYAKACWAIAGINLEGITTSSFQGWMEGIFSSSNDADSKKVLMICWAIWKSRNELLWNQ 32
           C  A+ CW + G      T S    W++  F  +++    K+ ++C ++W  RN  +WN+
Sbjct: 486 CSMARECWDLLGFRFSFPTESPICSWIQNFFIDNHEDTCAKMALVCGSLWNQRNHWVWNK 545

Query: 31  KKRSVYNTIA 2
           +  + Y  I+
Sbjct: 546 QSNTTYGVIS 555


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 39/118 (33%), Positives = 61/118 (51%)
 Frame = -3

Query: 388 WKNFWQLRVPPNVKDFNWRALSNCIPTKVQLQMKQVPLTSTACGFCDVYSETTTHCLLTC 209
           W   W++  PP + +F WRA  NC+PT+  L ++ V  T   C  C    ETT H L+ C
Sbjct: 508 WAQLWKVTAPPKILNFAWRAARNCLPTRFALTIRHVD-TPMCCPICRSELETTLHALVEC 566

Query: 208 EYAKACWAIAGINLEGITTSSFQGWMEGIFSSSNDADSKKVLMICWAIWKSRNELLWN 35
             A+  W  +G+ +      SF  W+  +F+  +     K L +CW +W  RN+++WN
Sbjct: 567 VAARDVWDESGLAMLQGNFGSFVDWLATMFAYCDFVVFAKYLAVCWGLWWRRNDVVWN 624


>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1188

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 41/119 (34%), Positives = 63/119 (52%), Gaps = 4/119 (3%)
 Frame = -3

Query: 388  WKNFWQLRVPPNVKDFNWRALSNCIPTKVQLQMKQVPLTSTACGFCDVYSETTTHCLLTC 209
            W + W+  +P  VK F+WRA+SNC+PT V  + K+ P  S  C FC +  E   H L  C
Sbjct: 855  WNHVWKCNIPQKVKVFSWRAISNCLPTMVN-KKKRNPELSDVCSFCGLEPEDVAHALWRC 913

Query: 208  EYAKACWAI--AGINLEGITTSSFQG--WMEGIFSSSNDADSKKVLMICWAIWKSRNEL 44
             +A+  W +  + + ++ I   S +G  W+     S ++ D    LM  W IW +RNE+
Sbjct: 914  PHARRYWDLMSSEMQVQRILYGSGEGSDWILDFLESISEDDRPVFLMSLWRIWYTRNEI 972


>ref|XP_003612608.1| Replication protein A 70 kDa DNA-binding subunit [Medicago
            truncatula] gi|355513943|gb|AES95566.1| Replication
            protein A 70 kDa DNA-binding subunit [Medicago
            truncatula]
          Length = 1723

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 43/128 (33%), Positives = 63/128 (49%), Gaps = 6/128 (4%)
 Frame = -3

Query: 394  GFWKNFWQLRVPPNVKDFNWRALSNCIPTKVQLQMKQVPLTSTACGFCDVYSETTTHCLL 215
            G W   W L+VPP VK F WR+  N +PT+V+LQ + V  T T C  C+   E + H   
Sbjct: 1415 GNWVLLWNLKVPPKVKTFLWRSCRNALPTRVRLQDRGVNCTKT-CALCENEDEDSMHLFF 1473

Query: 214  TCEYAKACWAIAG----INLEGITTSSFQGWMEGIFSSSNDADSKKVLMIC--WAIWKSR 53
             C  ++ CW   G    +  +     SF   M  I    +   S++V+  C  W+IWK R
Sbjct: 1474 YCTKSRQCWQQLGLWSKVQQKAQLNLSFGVTMFEILQELD--SSQRVIWACVMWSIWKQR 1531

Query: 52   NELLWNQK 29
            N+ +W  +
Sbjct: 1532 NDCIWRNE 1539


>gb|EEE57524.1| hypothetical protein OsJ_07834 [Oryza sativa Japonica Group]
          Length = 408

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 40/124 (32%), Positives = 63/124 (50%), Gaps = 4/124 (3%)
 Frame = -3

Query: 388 WKNFWQLRVPPNVKDFNWRALSNCIPTKVQLQMKQVPLTSTACGFCDVYSETTTHCLLTC 209
           W   W   VPP V+ F WR  S+C+ T+V  + +++    T C  C   SET  H L  C
Sbjct: 63  WNTIWSCPVPPKVRIFAWRVASDCLATRVNKKGRRLEALDT-CTLCGTESETAFHALCRC 121

Query: 208 EYAKACWAIAG--INLEGITTSSFQG--WMEGIFSSSNDADSKKVLMICWAIWKSRNELL 41
            YA+A WA       +   TT ++QG  W+       ++ +   +LM+ W IW  RNE++
Sbjct: 122 TYARALWAALREVWQIPDQTTWTYQGTKWLLLTLVKLSEMERMFILMLLWRIWHVRNEVV 181

Query: 40  WNQK 29
            +++
Sbjct: 182 HDKR 185