BLASTX nr result
ID: Bupleurum21_contig00029625
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00029625 (877 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu... 68 3e-09 ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268... 60 7e-07 emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] 60 7e-07 ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2... 58 2e-06 ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2... 57 4e-06 >ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis] gi|223546091|gb|EEF47594.1| RNA binding protein, putative [Ricinus communis] Length = 644 Score = 67.8 bits (164), Expect = 3e-09 Identities = 32/55 (58%), Positives = 36/55 (65%) Frame = -3 Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651 EK+ Y DHR + D YEDDWDRG RA+PE+ RSRSRDADYGKRR Sbjct: 585 EKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRR 639 >ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED: uncharacterized protein LOC100268141 isoform 2 [Vitis vinifera] Length = 647 Score = 60.1 bits (144), Expect = 7e-07 Identities = 29/55 (52%), Positives = 33/55 (60%) Frame = -3 Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651 EKD Y DHR + D EDDWDRG RA+ ++ RSRSRD DYGKRR Sbjct: 588 EKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 642 >emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera] Length = 168 Score = 60.1 bits (144), Expect = 7e-07 Identities = 29/55 (52%), Positives = 33/55 (60%) Frame = -3 Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651 EKD Y DHR + D EDDWDRG RA+ ++ RSRSRD DYGKRR Sbjct: 109 EKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 163 >ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1| predicted protein [Populus trichocarpa] Length = 573 Score = 58.2 bits (139), Expect = 2e-06 Identities = 30/55 (54%), Positives = 32/55 (58%) Frame = -3 Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651 EKD Y HR + D YEDD DRG RA PE+ RSRSRD DYGKRR Sbjct: 514 EKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRR 568 >ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1| predicted protein [Populus trichocarpa] Length = 619 Score = 57.4 bits (137), Expect = 4e-06 Identities = 29/55 (52%), Positives = 32/55 (58%) Frame = -3 Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651 EKD Y HR + D YEDD DRG RA PE+ RSR+RD DYGKRR Sbjct: 560 EKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRR 614