BLASTX nr result

ID: Bupleurum21_contig00029625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029625
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...    68   3e-09
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...    60   7e-07
emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]    60   7e-07
ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|2...    58   2e-06
ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|2...    57   4e-06

>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
           gi|223546091|gb|EEF47594.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 644

 Score = 67.8 bits (164), Expect = 3e-09
 Identities = 32/55 (58%), Positives = 36/55 (65%)
 Frame = -3

Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651
           EK+ Y DHR +  D  YEDDWDRG          RA+PE+  RSRSRDADYGKRR
Sbjct: 585 EKESYRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRR 639


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
           vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
           uncharacterized protein LOC100268141 isoform 2 [Vitis
           vinifera]
          Length = 647

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 29/55 (52%), Positives = 33/55 (60%)
 Frame = -3

Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651
           EKD Y DHR +  D   EDDWDRG          RA+ ++  RSRSRD DYGKRR
Sbjct: 588 EKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 642


>emb|CAN66828.1| hypothetical protein VITISV_015886 [Vitis vinifera]
          Length = 168

 Score = 60.1 bits (144), Expect = 7e-07
 Identities = 29/55 (52%), Positives = 33/55 (60%)
 Frame = -3

Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651
           EKD Y DHR +  D   EDDWDRG          RA+ ++  RSRSRD DYGKRR
Sbjct: 109 EKDGYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRR 163


>ref|XP_002315647.1| predicted protein [Populus trichocarpa] gi|222864687|gb|EEF01818.1|
           predicted protein [Populus trichocarpa]
          Length = 573

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 30/55 (54%), Positives = 32/55 (58%)
 Frame = -3

Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651
           EKD Y  HR +  D  YEDD DRG          RA PE+  RSRSRD DYGKRR
Sbjct: 514 EKDTYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRSRDVDYGKRR 568


>ref|XP_002312652.1| predicted protein [Populus trichocarpa] gi|222852472|gb|EEE90019.1|
           predicted protein [Populus trichocarpa]
          Length = 619

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 29/55 (52%), Positives = 32/55 (58%)
 Frame = -3

Query: 815 EKDDYHDHRHKNHDLAYEDDWDRGLPXXXXXXXXRAMPEDYGRSRSRDADYGKRR 651
           EKD Y  HR +  D  YEDD DRG          RA PE+  RSR+RD DYGKRR
Sbjct: 560 EKDSYRGHRQRERDSGYEDDRDRGHSSSRARSRSRAAPEEDYRSRTRDVDYGKRR 614


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