BLASTX nr result

ID: Bupleurum21_contig00029615 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029615
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523850.1| conserved hypothetical protein [Ricinus comm...   109   2e-22
ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_002523851.1| conserved hypothetical protein [Ricinus comm...   104   7e-21
ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...   100   2e-19
ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...    99   4e-19

>ref|XP_002523850.1| conserved hypothetical protein [Ricinus communis]
           gi|223536938|gb|EEF38576.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 331

 Score =  109 bits (273), Expect = 2e-22
 Identities = 47/107 (43%), Positives = 76/107 (71%), Gaps = 2/107 (1%)
 Frame = -3

Query: 370 LHDICKGENLWKHICRSVWPSINNPLLNDIISNFPAGHRSFFSDSFPTLHH--NYFTDGH 197
           L+ +C  + LW++IC+S+WPSIN PL+  +IS FP+GHRSFFS+S+P LHH  + FT+  
Sbjct: 51  LYTLCTEDKLWQNICKSIWPSINTPLIRSVISTFPSGHRSFFSNSYPLLHHHRHSFTNLA 110

Query: 196 RKTSELVLAIDIQYQNKPIYAKVNTLNTEDESFLDAPFCIDLLNNDE 56
             T EL+ A+D+ Y++  ++++V T  T    F  +PF +D+L+++E
Sbjct: 111 PATEELISAVDVYYKSVAVFSEVETTETVTGCFSCSPFRVDILHSEE 157


>ref|XP_002313604.1| predicted protein [Populus trichocarpa] gi|222850012|gb|EEE87559.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/107 (47%), Positives = 68/107 (63%), Gaps = 2/107 (1%)
 Frame = -3

Query: 370 LHDICKGENLWKHICRSVWPSINNPLLNDIISNFPAGHRSFFSDSFPTLHHNYFTDGHRK 191
           LH +   + LW+ IC S WPSIN+P++  II  FP+GH SFFSDS+P LHHN+ +     
Sbjct: 55  LHALSTEDKLWQKICTSTWPSINDPIVRSIIPTFPSGHLSFFSDSYPLLHHNHHSSSFPT 114

Query: 190 TSE--LVLAIDIQYQNKPIYAKVNTLNTEDESFLDAPFCIDLLNNDE 56
           TS    V A+DI Y+N PI++KV T  T  + F  +PF +DLL   E
Sbjct: 115 TSTECFVSAVDIYYKNVPIFSKVETTETFSDWFKSSPFRLDLLEPKE 161


>ref|XP_002523851.1| conserved hypothetical protein [Ricinus communis]
           gi|223536939|gb|EEF38577.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 338

 Score =  104 bits (260), Expect = 7e-21
 Identities = 52/109 (47%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
 Frame = -3

Query: 367 HDICKGENLWKHICRSVWPSINNPLLNDIISNFPAGHRSFFSDSFPTLHHNYFT-----D 203
           H +   + LW++IC   WPS N+PLL+ +IS+FP+GHRSFFSDSFP L H+  T      
Sbjct: 48  HTLSSQDKLWQNICSFTWPSTNDPLLSSVISSFPSGHRSFFSDSFPLLRHHRPTCRTLPT 107

Query: 202 GHRKTSELVLAIDIQYQNKPIYAKVNTLNTEDESFLDAPFCIDLLNNDE 56
               T+EL+ A+DI Y+N PI++KV    T    FL +PF IDLL   E
Sbjct: 108 PFPSTTELISAVDIYYRNVPIFSKVEKTETVSRWFLCSPFRIDLLEPKE 156


>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/124 (38%), Positives = 75/124 (60%), Gaps = 3/124 (2%)
 Frame = -3

Query: 370 LHDICKGENLWKHICRSVWPSINNPLLNDIISNFPAGHRSFFSDSFPTLHHNYFTDGHR- 194
           +H +C  ++LW+ I  + WPS+ NP+   +IS  P G+RS FSD+FP+LH++ F   HR 
Sbjct: 54  MHRLCTQDDLWREISTATWPSLQNPIARHVISAIPGGYRSIFSDAFPSLHNSSFR-RHRP 112

Query: 193 --KTSELVLAIDIQYQNKPIYAKVNTLNTEDESFLDAPFCIDLLNNDETLKLPGKFDTED 20
              T EL+ A+D+ YQ KP++++V    T+   F  +P  ID L + E +    KF  +D
Sbjct: 113 PPPTPELISAVDMYYQGKPVFSRVIRTETQKNWFFASPLWIDALQHKELIPTTVKFARKD 172

Query: 19  ELFL 8
           E +L
Sbjct: 173 EEWL 176


>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score = 99.0 bits (245), Expect = 4e-19
 Identities = 52/127 (40%), Positives = 74/127 (58%), Gaps = 6/127 (4%)
 Frame = -3

Query: 370 LHDICKGENLWKHICRSVWPSINNPLLNDIISNFPAGHRSFFSDSFPTLHHN-----YFT 206
           L  +C   +LW++IC + WPS+N+PL    I+ FPA HRS FSDSFP+LHH+        
Sbjct: 76  LRGLCTEHHLWRNICAATWPSLNDPLAAATIATFPATHRSIFSDSFPSLHHSPPNPIPTQ 135

Query: 205 DGHRKTSELVLAIDIQYQNKPIYAKVNTLNTEDESFLDAPFCIDLLNNDETLKLPGKF-D 29
                  EL+ A+DI Y+ KP++++V    T    FL +P  +DLL+  E +  P KF  
Sbjct: 136 PPTPPPPELISAVDIYYKGKPVFSRVIRTETHKGWFLCSPLWVDLLDPTEVVPTPLKFAQ 195

Query: 28  TEDELFL 8
           T DE+ L
Sbjct: 196 TNDEIEL 202


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