BLASTX nr result

ID: Bupleurum21_contig00029609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029609
         (552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270650.1| PREDICTED: LOB domain-containing protein 4 [...   197   7e-49
ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycin...   196   3e-48
ref|XP_002513395.1| LOB domain-containing protein, putative [Ric...   196   3e-48
ref|XP_004150042.1| PREDICTED: LOB domain-containing protein 4-l...   195   5e-48
ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   194   6e-48

>ref|XP_002270650.1| PREDICTED: LOB domain-containing protein 4 [Vitis vinifera]
           gi|302143255|emb|CBI20550.3| unnamed protein product
           [Vitis vinifera]
          Length = 175

 Score =  197 bits (502), Expect = 7e-49
 Identities = 101/125 (80%), Positives = 109/125 (87%)
 Frame = +1

Query: 64  MKGSGRKQSGAAVGGLLSPCAACKLLRRRCASGDCVFAPHFPPDDPSKFANVHKVFGASN 243
           MK S RKQ  A      SPCAACKLLRRRCA  DCVFAP+FP D+P KFANVHKVFGASN
Sbjct: 1   MKESSRKQGAA------SPCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASN 53

Query: 244 VNKMLQELPEQQRGDAVSSLVYEANARIRDPVYGCVGAIASLQQQIDMLQTQPALAQAQV 423
           VNKMLQELP +QRGDAVSS+VYEANAR+RDPVYGCVGAI+SLQQQID+LQTQ ALAQA+V
Sbjct: 54  VNKMLQELPVEQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLALAQAEV 113

Query: 424 VHLRV 438
           VHLRV
Sbjct: 114 VHLRV 118


>ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycine max]
           gi|255628883|gb|ACU14786.1| unknown [Glycine max]
          Length = 159

 Score =  196 bits (497), Expect = 3e-48
 Identities = 99/125 (79%), Positives = 108/125 (86%)
 Frame = +1

Query: 64  MKGSGRKQSGAAVGGLLSPCAACKLLRRRCASGDCVFAPHFPPDDPSKFANVHKVFGASN 243
           MK  GRKQ      G  SPCAACKLLRRRCA  DCVFAP+FP D+P KFANVHKVFGASN
Sbjct: 1   MKDGGRKQ------GAPSPCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASN 53

Query: 244 VNKMLQELPEQQRGDAVSSLVYEANARIRDPVYGCVGAIASLQQQIDMLQTQPALAQAQV 423
           VNKMLQ+LPE QRGDAVSS+VYEANAR+RDPVYGCVGAI+SLQQQID+LQTQ A+AQA+ 
Sbjct: 54  VNKMLQDLPEHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEA 113

Query: 424 VHLRV 438
           VHLRV
Sbjct: 114 VHLRV 118


>ref|XP_002513395.1| LOB domain-containing protein, putative [Ricinus communis]
           gi|223547303|gb|EEF48798.1| LOB domain-containing
           protein, putative [Ricinus communis]
          Length = 147

 Score =  196 bits (497), Expect = 3e-48
 Identities = 99/125 (79%), Positives = 109/125 (87%)
 Frame = +1

Query: 64  MKGSGRKQSGAAVGGLLSPCAACKLLRRRCASGDCVFAPHFPPDDPSKFANVHKVFGASN 243
           MK SGRKQ      G LSPCAACKLLRRRCA  DCVFAP+FP D+P KFA+VHKVFGASN
Sbjct: 1   MKESGRKQ------GALSPCAACKLLRRRCAQ-DCVFAPYFPADEPQKFASVHKVFGASN 53

Query: 244 VNKMLQELPEQQRGDAVSSLVYEANARIRDPVYGCVGAIASLQQQIDMLQTQPALAQAQV 423
           VNKMLQELPE QR DAVSS+VYEANAR+RDPVYGCVGAI+SLQQQID LQTQ A+AQA+V
Sbjct: 54  VNKMLQELPEHQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDSLQTQLAIAQAEV 113

Query: 424 VHLRV 438
           VH+R+
Sbjct: 114 VHMRM 118


>ref|XP_004150042.1| PREDICTED: LOB domain-containing protein 4-like [Cucumis sativus]
           gi|449502504|ref|XP_004161659.1| PREDICTED: LOB
           domain-containing protein 4-like [Cucumis sativus]
          Length = 173

 Score =  195 bits (495), Expect = 5e-48
 Identities = 108/158 (68%), Positives = 123/158 (77%), Gaps = 1/158 (0%)
 Frame = +1

Query: 73  SGRKQSGAAVGGLLSPCAACKLLRRRCASGDCVFAPHFPPDDPSKFANVHKVFGASNVNK 252
           SGRKQ     G  LSPCAACKLLRRRCA  DCVFAP+FP D+P KFA+VHKVFGASNVNK
Sbjct: 5   SGRKQ-----GTSLSPCAACKLLRRRCAQ-DCVFAPYFPADEPHKFASVHKVFGASNVNK 58

Query: 253 MLQELPEQQRGDAVSSLVYEANARIRDPVYGCVGAIASLQQQIDMLQTQPALAQAQVVHL 432
           MLQELPEQQR DAVSS+VYEANAR+RDPVYGCVGAI+SLQQQID+LQTQ A+AQA+VVH+
Sbjct: 59  MLQELPEQQRSDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDLLQTQLAIAQAEVVHM 118

Query: 433 RV-HXXXXXXXXTMGQVLKPCGSSPLTSKLISLSPQTS 543
           R+ H        T G    P  +SP +SK+   +P  S
Sbjct: 119 RMRHFPSSSYNPTAGH--SPETASP-SSKMNIPAPNKS 153


>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  194 bits (494), Expect = 6e-48
 Identities = 100/125 (80%), Positives = 106/125 (84%)
 Frame = +1

Query: 64  MKGSGRKQSGAAVGGLLSPCAACKLLRRRCASGDCVFAPHFPPDDPSKFANVHKVFGASN 243
           MK  GRKQ   A      PCAACKLLRRRCA  DCVFAP+FP D+P KFANVHKVFGASN
Sbjct: 1   MKEGGRKQGAPA------PCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASN 53

Query: 244 VNKMLQELPEQQRGDAVSSLVYEANARIRDPVYGCVGAIASLQQQIDMLQTQPALAQAQV 423
           VNKMLQELP  QRGDAVSS+VYEANAR+RDPVYGCVGAI+SLQQQID LQTQ ALAQA+V
Sbjct: 54  VNKMLQELPVHQRGDAVSSMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEV 113

Query: 424 VHLRV 438
           VHLRV
Sbjct: 114 VHLRV 118


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