BLASTX nr result

ID: Bupleurum21_contig00029603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029603
         (609 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|2...   111   9e-23
ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like...   109   4e-22
emb|CBI39502.3| unnamed protein product [Vitis vinifera]              109   4e-22
ref|XP_002512419.1| DNA helicase, putative [Ricinus communis] gi...   102   5e-20
ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like...    99   6e-19

>ref|XP_002330211.1| predicted protein [Populus trichocarpa] gi|222871667|gb|EEF08798.1|
           predicted protein [Populus trichocarpa]
          Length = 1048

 Score =  111 bits (278), Expect = 9e-23
 Identities = 51/83 (61%), Positives = 66/83 (79%), Gaps = 1/83 (1%)
 Frame = +3

Query: 6   RRAYQILSDCFRYGINNSCCRAKTLVQYFGEEFSQKQCLTCDVCINSPPEMQNLKNEAKL 185
           + A+++LSDCFRYG+N SCCRAKTLV+YFGE+FS ++CL CDVC+N PPEMQ+LK EA +
Sbjct: 654 KHAFKMLSDCFRYGMNTSCCRAKTLVEYFGEDFSYEKCLLCDVCVNGPPEMQDLKEEADI 713

Query: 186 FMKAIAAQY-TGQLRSLLTSYIG 251
            MK IAA + + Q  S  +SY G
Sbjct: 714 LMKVIAAYHLSEQNHSFDSSYDG 736


>ref|XP_002279606.2| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Vitis
           vinifera]
          Length = 893

 Score =  109 bits (272), Expect = 4e-22
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +3

Query: 6   RRAYQILSDCFRYGINNSCCRAKTLVQYFGEEFSQKQCLTCDVCINSPPEMQNLKNEAKL 185
           ++AY++LSDCFRYG+N +CCRAKTLV+YFGE+F  + C+ CDVC+N PPE QNLK+EA  
Sbjct: 654 KQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKDEADT 713

Query: 186 FMKAIAAQY 212
           FM  IAA Y
Sbjct: 714 FMHVIAAHY 722


>emb|CBI39502.3| unnamed protein product [Vitis vinifera]
          Length = 1537

 Score =  109 bits (272), Expect = 4e-22
 Identities = 45/69 (65%), Positives = 57/69 (82%)
 Frame = +3

Query: 6   RRAYQILSDCFRYGINNSCCRAKTLVQYFGEEFSQKQCLTCDVCINSPPEMQNLKNEAKL 185
           ++AY++LSDCFRYG+N +CCRAKTLV+YFGE+F  + C+ CDVC+N PPE QNLK+EA  
Sbjct: 613 KQAYKMLSDCFRYGMNTTCCRAKTLVEYFGEDFCHQSCILCDVCVNGPPEKQNLKDEADT 672

Query: 186 FMKAIAAQY 212
           FM  IAA Y
Sbjct: 673 FMHVIAAHY 681


>ref|XP_002512419.1| DNA helicase, putative [Ricinus communis]
           gi|223548380|gb|EEF49871.1| DNA helicase, putative
           [Ricinus communis]
          Length = 803

 Score =  102 bits (254), Expect = 5e-20
 Identities = 47/80 (58%), Positives = 62/80 (77%)
 Frame = +3

Query: 6   RRAYQILSDCFRYGINNSCCRAKTLVQYFGEEFSQKQCLTCDVCINSPPEMQNLKNEAKL 185
           ++AY++LSDCFRYG+N S CRAKTLVQYFGE+F+ ++CL CDVC+  PP+M N K EA +
Sbjct: 560 KQAYKMLSDCFRYGMNTSNCRAKTLVQYFGEDFTSEKCLLCDVCVRGPPKMHNWKEEADI 619

Query: 186 FMKAIAAQYTGQLRSLLTSY 245
            M+ IAA + GQ  SL  +Y
Sbjct: 620 LMQIIAAHH-GQSSSLDGAY 638


>ref|XP_003555610.1| PREDICTED: ATP-dependent DNA helicase Q-like SIM-like [Glycine max]
          Length = 854

 Score = 99.0 bits (245), Expect = 6e-19
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +3

Query: 6   RRAYQILSDCFRYGINNSCCRAKTLVQYFGEEFSQKQCLTCDVCINSPPEMQNLKNEAKL 185
           ++AY +LSDCFRYG+N SCCRAK LV+YFGE+FS ++CL CDVCI+ PP+ QN+K EA +
Sbjct: 607 KQAYIMLSDCFRYGMNTSCCRAKILVEYFGEDFSHQKCLLCDVCIDGPPQRQNVKEEACI 666

Query: 186 FMKAIAA 206
            ++ I A
Sbjct: 667 LLQTIGA 673


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