BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029601
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]       70   1e-15
dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis t...    86   6e-15
gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arab...    84   2e-14
emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]    84   4e-14
emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]    82   9e-14

>gb|ABE88096.1| Integrase, catalytic region [Medicago truncatula]
          Length = 604

 Score = 69.7 bits (169), Expect(2) = 1e-15
 Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
 Frame = +3

Query: 474 HCLSAVDTTKLWHLRLGHLP---FSQLKLVLPDCAIKECLNSVVCQICHTAKQARKPFSI 644
           H +S      LWH RLGHL     SQ+  + PD  +    N  +C ICH AKQ + P++ 
Sbjct: 285 HIISEPSYAALWHFRLGHLSNQRLSQMHHLYPDIHVD---NKFICDICHFAKQRKLPYNS 341

Query: 645 SSIKTTKAFEMLHIDVWGPYKTKSLSGCTLFL 740
           S+   +  FE+L++D+WGP    S+ G   FL
Sbjct: 342 STSIASSNFELLYLDIWGPLAKVSIHGQRYFL 373



 Score = 39.3 bits (90), Expect(2) = 1e-15
 Identities = 22/90 (24%), Positives = 43/90 (47%), Gaps = 7/90 (7%)
 Frame = +2

Query: 107 FCNHCKVPGHSIERCFKIHGYPPGFQPRHDKRVATSAQHISADGSEVITTADNQGISQQQ 286
           +C+ C    H++E C++ HG+P   +         S     + GS  I+     G++Q+Q
Sbjct: 202 YCSFCHKTNHTLEFCYQKHGFPNANKGSGSTNAVNSEGVPESQGSSAISQI---GLTQEQ 258

Query: 287 YNYLLDIINKQH-------ATAADTSDFIS 355
           Y +L+ ++ +          T+A+T+  IS
Sbjct: 259 YVHLVSLLQQSSLIIPAPPITSANTNHIIS 288


>dbj|BAB10837.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 1462

 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 45/111 (40%), Positives = 60/111 (54%)
 Frame = +3

Query: 408 GRLQNGLYSLTNDDHCGASPVKHCLSAVDTTKLWHLRLGHLPFSQLKLVLPDCAIKECLN 587
           G+ QNGLY        G   V        +++LWH RLGH     LKL+    +     +
Sbjct: 443 GKQQNGLYFFR-----GTETVASMTRMDSSSQLWHCRLGHPSSKVLKLLSFSDSTGHAFD 497

Query: 588 SVVCQICHTAKQARKPFSISSIKTTKAFEMLHIDVWGPYKTKSLSGCTLFL 740
           S  C+IC  AKQ R PF +S+ KT+  FEM+H D+WGPY+T S+ G   FL
Sbjct: 498 SKTCEICIKAKQTRDPFPLSNNKTSSPFEMVHCDLWGPYRTTSICGSNYFL 548


>gb|AAG09097.1|AC009323_8 Putative retroelement polyprotein [Arabidopsis thaliana]
          Length = 1486

 Score = 84.3 bits (207), Expect = 2e-14
 Identities = 46/111 (41%), Positives = 61/111 (54%)
 Frame = +3

Query: 408 GRLQNGLYSLTNDDHCGASPVKHCLSAVDTTKLWHLRLGHLPFSQLKLVLPDCAIKECLN 587
           GR  NGLY     +   A   K    A+ +++LWH RLGH     L L+          +
Sbjct: 478 GRELNGLYFFRGVETAAAVTSK----ALPSSQLWHQRLGHPSSKALHLLPFSDVTSSTFD 533

Query: 588 SVVCQICHTAKQARKPFSISSIKTTKAFEMLHIDVWGPYKTKSLSGCTLFL 740
           S  C+IC  AKQ R PF +SS KT+ AFE++H D+WGPY+T S+ G   FL
Sbjct: 534 SKTCEICIQAKQTRDPFPLSSNKTSFAFELVHCDLWGPYRTTSICGSRYFL 584


>emb|CAN59949.1| hypothetical protein VITISV_043423 [Vitis vinifera]
          Length = 1059

 Score = 83.6 bits (205), Expect = 4e-14
 Identities = 50/127 (39%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
 Frame = +3

Query: 390 RPQILLGRLQNGLYSL---------TNDDHCGASPVKHCLSAV-DTTKLWHLRLGHLPFS 539
           R  I LG  ++GLY L         T      A+  +   S V  +T LWH RLGHL  S
Sbjct: 468 RTTIGLGEQRDGLYYLVALASEKPKTQTPSXXATSCRSPSSQVTSSTALWHXRLGHLSSS 527

Query: 540 QLKLVLPDCAIKECLNSVVCQICHTAKQARKPFSISSIKTTKAFEMLHIDVWGPYKTKSL 719
           +L  +          ++  C +C  AKQ R PFS+SSI + + FE++H D WGPYK  SL
Sbjct: 528 RLDFMAKHLLNFPFQSNNACDVCXLAKQRRLPFSVSSISSVRPFELIHCDXWGPYKIASL 587

Query: 720 SGCTLFL 740
           SG   FL
Sbjct: 588 SGAKXFL 594


>emb|CAN82526.1| hypothetical protein VITISV_028058 [Vitis vinifera]
          Length = 1125

 Score = 82.4 bits (202), Expect = 9e-14
 Identities = 48/127 (37%), Positives = 65/127 (51%), Gaps = 10/127 (7%)
 Frame = +3

Query: 390 RPQILLGRLQNGLYSL---------TNDDHCGASPVKHCLSAV-DTTKLWHLRLGHLPFS 539
           R  I LG  ++GLY L         T       +  +   S V  +T LWH RLGHL  S
Sbjct: 204 RTTIGLGEQRDGLYYLVALASEKPKTQTPSAATTSCRSPSSQVTSSTALWHRRLGHLSSS 263

Query: 540 QLKLVLPDCAIKECLNSVVCQICHTAKQARKPFSISSIKTTKAFEMLHIDVWGPYKTKSL 719
           +L  +          ++  C +C  AKQ + PFS+SSI + + FE++H D+WGPYK  SL
Sbjct: 264 RLDFMAKHLLNFHFQSNNACDVCALAKQRQLPFSVSSISSVRPFELIHCDIWGPYKIASL 323

Query: 720 SGCTLFL 740
           SG   FL
Sbjct: 324 SGAKYFL 330