BLASTX nr result

ID: Bupleurum21_contig00029596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029596
         (628 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588355.1| Mitochondrial protein, putative [Medicago tr...   145   2e-56
ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas ...   157   3e-43
gb|ACD87749.1| glycerol kinase [Candidatus Liberibacter american...   159   9e-42
ref|ZP_05822976.1| cell wall-associated hydrolase [Brucella abor...   154   4e-41
ref|ZP_05839398.1| cell wall-associated hydrolase [Brucella suis...   152   2e-40

>ref|XP_003588355.1| Mitochondrial protein, putative [Medicago truncatula]
           gi|355477403|gb|AES58606.1| Mitochondrial protein,
           putative [Medicago truncatula]
          Length = 1106

 Score =  145 bits (366), Expect(2) = 2e-56
 Identities = 69/69 (100%), Positives = 69/69 (100%)
 Frame = +1

Query: 355 DIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFRLCSTSRSHSQAGLYH 534
           DIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFRLCSTSRSHSQAGLYH
Sbjct: 423 DIEVPNDSVDKSSWESSACYPRRTFDPLSESPSTRDSRITMADFRLCSTSRSHSQAGLYH 482

Query: 535 YAHEQNLSL 561
           YAHEQNLSL
Sbjct: 483 YAHEQNLSL 491



 Score =  100 bits (248), Expect(2) = 2e-56
 Identities = 56/95 (58%), Positives = 59/95 (62%)
 Frame = +3

Query: 3   LVRDRFTPRGAYTSRLSKFCSKTSSENLYREGFPAAQQFFHTNLAARRCYWHNNRYTIGW 182
           LVRDRFTPRGAYTSRLSKFCSKTS ENLYREGFP                          
Sbjct: 361 LVRDRFTPRGAYTSRLSKFCSKTSFENLYREGFP-------------------------- 394

Query: 183 PNPVLSY*GWLLAVLPLTPTVDMDRTVSRRSEPSS 287
                   GWLLAVLPLTPTVD +RTVSRRS+P+S
Sbjct: 395 --------GWLLAVLPLTPTVDRNRTVSRRSKPNS 421


>ref|ZP_01227369.1| conserved hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1] gi|90336396|gb|EAS50137.1| conserved
           hypothetical protein [Aurantimonas manganoxydans
           SI85-9A1]
          Length = 152

 Score =  157 bits (397), Expect(2) = 3e-43
 Identities = 81/105 (77%), Positives = 87/105 (82%)
 Frame = +3

Query: 237 PTVDMDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKRLRR*ELLGVISLLS 416
           PT D DRTVSRRSEPSSRTAL+GEQPNPW++LQPQ A SRHRGAK+ RR  LLGVISLLS
Sbjct: 44  PTADRDRTVSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLLS 103

Query: 417 PAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRSRAE 551
           PAYL SVER PFH G PDHY RLSSL D SVSQSG L+PL S  +
Sbjct: 104 PAYLLSVERWPFHAGPPDHYDRLSSLLDLSVSQSGGLMPLHSTTD 148



 Score = 43.9 bits (102), Expect(2) = 3e-43
 Identities = 25/46 (54%), Positives = 28/46 (60%)
 Frame = +2

Query: 110 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 247
           +AV+P   S PAL LA Q VH R  QP PLVLG  P +SP  T  R
Sbjct: 3   SAVIPTVHSYPALRLAPQQVHQRYVQPGPLVLGSDPVNSPAPTADR 48


>gb|ACD87749.1| glycerol kinase [Candidatus Liberibacter americanus str. Sao Paulo]
           gi|289546839|gb|ADD10129.1| glycerol kinase [Candidatus
           Liberibacter sp. Sao_Paulo-2]
          Length = 152

 Score =  159 bits (403), Expect(2) = 9e-42
 Identities = 82/106 (77%), Positives = 90/106 (84%)
 Frame = +3

Query: 234 TPTVDMDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKRLRR*ELLGVISLL 413
           TPT D DRTVSRRSEPSSRTAL+GEQPNPW++LQPQ A SRHRGAK+ RR  LLGVISLL
Sbjct: 43  TPTADRDRTVSRRSEPSSRTALIGEQPNPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLL 102

Query: 414 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRSRAE 551
           SPAYL SVER PFH+  PDHY RLSSL D SVSQSGRL+PL S ++
Sbjct: 103 SPAYLLSVERWPFHSEPPDHYDRLSSLLDLSVSQSGRLMPLHSTSD 148



 Score = 36.6 bits (83), Expect(2) = 9e-42
 Identities = 21/46 (45%), Positives = 25/46 (54%)
 Frame = +2

Query: 110 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 247
           +AV+    S PA+LL  Q VH R   P PLVLG  P + P  T  R
Sbjct: 3   SAVILSVFSYPAMLLEKQQVHQRYVHPGPLVLGKDPVNIPTPTADR 48


>ref|ZP_05822976.1| cell wall-associated hydrolase [Brucella abortus NCTC 8038]
           gi|260565853|ref|ZP_05836335.1| cell wall-associated
           hydrolase [Brucella melitensis bv. 1 str. 16M]
           gi|261219758|ref|ZP_05934039.1| cell wall-associated
           hydrolase [Brucella ceti M13/05/1]
           gi|261313976|ref|ZP_05953173.1| cell wall-associated
           hydrolase [Brucella pinnipedialis M163/99/10]
           gi|261316146|ref|ZP_05955343.1| cell wall-associated
           hydrolase [Brucella pinnipedialis B2/94]
           gi|261322647|ref|ZP_05961844.1| cell wall-associated
           hydrolase [Brucella ceti M644/93/1]
           gi|265984660|ref|ZP_06097395.1| cell wall-associated
           hydrolase [Brucella sp. 83/13]
           gi|265996870|ref|ZP_06109427.1| cell wall-associated
           hydrolase [Brucella ceti M490/95/1]
           gi|260095405|gb|EEW79284.1| cell wall-associated
           hydrolase [Brucella abortus NCTC 8038]
           gi|260151029|gb|EEW86125.1| cell wall-associated
           hydrolase [Brucella melitensis bv. 1 str. 16M]
           gi|260924847|gb|EEX91415.1| cell wall-associated
           hydrolase [Brucella ceti M13/05/1]
           gi|261295337|gb|EEX98833.1| cell wall-associated
           hydrolase [Brucella ceti M644/93/1]
           gi|261295369|gb|EEX98865.1| cell wall-associated
           hydrolase [Brucella pinnipedialis B2/94]
           gi|261303002|gb|EEY06499.1| cell wall-associated
           hydrolase [Brucella pinnipedialis M163/99/10]
           gi|262551237|gb|EEZ07328.1| cell wall-associated
           hydrolase [Brucella ceti M490/95/1]
           gi|264663252|gb|EEZ33513.1| cell wall-associated
           hydrolase [Brucella sp. 83/13]
          Length = 152

 Score =  154 bits (388), Expect(2) = 4e-41
 Identities = 80/103 (77%), Positives = 85/103 (82%)
 Frame = +3

Query: 234 TPTVDMDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKRLRR*ELLGVISLL 413
           TPT D DRTVSRRSEP+SRTAL GEQP PW++LQPQ A SRHRGAK+ RR  LLGVISLL
Sbjct: 43  TPTADRDRTVSRRSEPNSRTALNGEQPYPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLL 102

Query: 414 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRS 542
           SPAYL SVER PFH G PDHY RLSSL D SV QSGRL+PL S
Sbjct: 103 SPAYLLSVERWPFHAGPPDHYDRLSSLLDLSVLQSGRLMPLHS 145



 Score = 40.0 bits (92), Expect(2) = 4e-41
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +2

Query: 110 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 247
           +AV+P   S PA+ LA Q VH R   P PLVLG  P + P  T  R
Sbjct: 3   SAVIPSVYSYPAMRLAPQQVHQRYVHPGPLVLGTDPVNIPTPTADR 48


>ref|ZP_05839398.1| cell wall-associated hydrolase [Brucella suis bv. 4 str. 40]
           gi|260154117|gb|EEW89200.1| cell wall-associated
           hydrolase [Brucella suis bv. 4 str. 40]
          Length = 152

 Score =  152 bits (383), Expect(2) = 2e-40
 Identities = 79/103 (76%), Positives = 85/103 (82%)
 Frame = +3

Query: 234 TPTVDMDRTVSRRSEPSSRTALMGEQPNPWNILQPQVAKSRHRGAKRLRR*ELLGVISLL 413
           TPT D +RTVSRRSEP+SRTAL GEQP PW++LQPQ A SRHRGAK+ RR  LLGVISLL
Sbjct: 43  TPTADRNRTVSRRSEPNSRTALNGEQPYPWDLLQPQDAMSRHRGAKQPRRYGLLGVISLL 102

Query: 414 SPAYL*SVEREPFHTGLPDHYGRLSSLFDQSVSQSGRLIPLRS 542
           SPAYL SVER PFH G PDHY RLSSL D SV QSGRL+PL S
Sbjct: 103 SPAYLLSVERWPFHAGPPDHYDRLSSLLDLSVLQSGRLMPLHS 145



 Score = 40.0 bits (92), Expect(2) = 2e-40
 Identities = 22/46 (47%), Positives = 26/46 (56%)
 Frame = +2

Query: 110 AAVLPYQLSCPALLLA*QPVHHRLAQPSPLVLGLAPRSSPFNTNGR 247
           +AV+P   S PA+ LA Q VH R   P PLVLG  P + P  T  R
Sbjct: 3   SAVIPSVYSYPAMRLAPQQVHQRYVHPGPLVLGTDPVNIPTPTADR 48


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