BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029575
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18428.3| unnamed protein product [Vitis vinifera]              250   3e-64
ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244...   250   3e-64
ref|XP_002513303.1| conserved hypothetical protein [Ricinus comm...   219   7e-55
gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A....   213   5e-53
ref|NP_178014.2| Mitochondrial transcription termination factor ...   213   5e-53

>emb|CBI18428.3| unnamed protein product [Vitis vinifera]
          Length = 808

 Score =  250 bits (639), Expect = 3e-64
 Identities = 144/271 (53%), Positives = 191/271 (70%), Gaps = 10/271 (3%)
 Frame = +3

Query: 102 VSKIIMECCGGRLTLEECYEMAVKSPKYVQMLVDGVHEFETPN-------NISTLKERVY 260
           VS+I+ E     ++ EE  E+A+ SPKYV+MLVDGV + E  N          + KE+VY
Sbjct: 81  VSEILRE---SGVSEEESVEIALNSPKYVKMLVDGVRDLEEWNAWKKGAEEAESFKEKVY 137

Query: 261 EMGQQKGDKGIAPFLESSFGMSLPSAMHFSRLCLASKRTLPHLIVKVSYLKEMLFSDDCD 440
            + ++KGD G   FLES  G+SL SA+  +R    S  +LP LI KV ++K+M FS+  D
Sbjct: 138 RLAREKGDYGRLAFLES-IGLSLSSALSVARYL--SSESLPGLIEKVRFVKQMFFSEGND 194

Query: 441 EYCNDIGKIARRMMMRLSISVDDDALQQTLAFFEKTQARRGGLNLLGFGDASFRQLIQSF 620
           E    +GK ARRMMM LSI +D+D LQQTL+FFEK +ARRGGL++L   DASF  L++SF
Sbjct: 195 E--GFLGKNARRMMMYLSIPIDED-LQQTLSFFEKIEARRGGLDILCSKDASFGYLVESF 251

Query: 621 PRILLLPLETRIKPMIEFLEDTGVPKRCMRKVVLLYPPILFYDIEKDIQP---AYIKVKA 791
           PR+LLL +E+ +KPM++FLED GV +  MR V+LLYPPI+FYDIEKDI+P   A+ K+ A
Sbjct: 252 PRLLLLSVESHLKPMMKFLEDIGVQRGSMRNVLLLYPPIIFYDIEKDIKPRLLAFEKIGA 311

Query: 792 EKNEFGRILLKYPWILSSSIQRNYEEIHSFF 884
              + GR+L+KYPWI+S+SIQ NYEEI SFF
Sbjct: 312 ADKDLGRMLVKYPWIISTSIQENYEEILSFF 342


>ref|XP_002267835.1| PREDICTED: uncharacterized protein LOC100244378 [Vitis vinifera]
          Length = 601

 Score =  250 bits (639), Expect = 3e-64
 Identities = 144/271 (53%), Positives = 191/271 (70%), Gaps = 10/271 (3%)
 Frame = +3

Query: 102 VSKIIMECCGGRLTLEECYEMAVKSPKYVQMLVDGVHEFETPN-------NISTLKERVY 260
           VS+I+ E     ++ EE  E+A+ SPKYV+MLVDGV + E  N          + KE+VY
Sbjct: 81  VSEILRE---SGVSEEESVEIALNSPKYVKMLVDGVRDLEEWNAWKKGAEEAESFKEKVY 137

Query: 261 EMGQQKGDKGIAPFLESSFGMSLPSAMHFSRLCLASKRTLPHLIVKVSYLKEMLFSDDCD 440
            + ++KGD G   FLES  G+SL SA+  +R    S  +LP LI KV ++K+M FS+  D
Sbjct: 138 RLAREKGDYGRLAFLES-IGLSLSSALSVARYL--SSESLPGLIEKVRFVKQMFFSEGND 194

Query: 441 EYCNDIGKIARRMMMRLSISVDDDALQQTLAFFEKTQARRGGLNLLGFGDASFRQLIQSF 620
           E    +GK ARRMMM LSI +D+D LQQTL+FFEK +ARRGGL++L   DASF  L++SF
Sbjct: 195 E--GFLGKNARRMMMYLSIPIDED-LQQTLSFFEKIEARRGGLDILCSKDASFGYLVESF 251

Query: 621 PRILLLPLETRIKPMIEFLEDTGVPKRCMRKVVLLYPPILFYDIEKDIQP---AYIKVKA 791
           PR+LLL +E+ +KPM++FLED GV +  MR V+LLYPPI+FYDIEKDI+P   A+ K+ A
Sbjct: 252 PRLLLLSVESHLKPMMKFLEDIGVQRGSMRNVLLLYPPIIFYDIEKDIKPRLLAFEKIGA 311

Query: 792 EKNEFGRILLKYPWILSSSIQRNYEEIHSFF 884
              + GR+L+KYPWI+S+SIQ NYEEI SFF
Sbjct: 312 ADKDLGRMLVKYPWIISTSIQENYEEILSFF 342


>ref|XP_002513303.1| conserved hypothetical protein [Ricinus communis]
           gi|223547211|gb|EEF48706.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 574

 Score =  219 bits (558), Expect = 7e-55
 Identities = 129/265 (48%), Positives = 169/265 (63%), Gaps = 11/265 (4%)
 Frame = +3

Query: 138 LTLEECYEMAVKSPKYVQMLVDGVHEFETPNNIST---------LKERVYEMGQQKGDKG 290
           +T+E+   +A   P+Y +ML+D V + E  N   +          KE+V  M ++KGD G
Sbjct: 84  ITIEDSTSIASNCPQYAKMLIDSVKDLEEWNAWKSDEMEFDALGFKEKVLYMAKEKGDNG 143

Query: 291 IAPFLESSFGMSLPSAMHFSRLCLASKRTLPHLIVKVSYLKEMLFSDDCDEYCNDIGKIA 470
              FLES  G +L SAM+ +R    S  +LP LI+KV Y+KEM FS   D+    IG+ A
Sbjct: 144 KVAFLES-LGFTLSSAMNVARYL--STESLPALILKVKYIKEMFFSGSDDK--GHIGRNA 198

Query: 471 RRMMMRLSISVDDDALQQTLAFFEKTQARRGGLNLLGFGDASFRQLIQSFPRILLLPLET 650
           RRMMM LSI +DDD LQQTL+ FEK QARRGGL+ LG  DA+FR  I+SFPR LLL  + 
Sbjct: 199 RRMMMHLSIPIDDD-LQQTLSLFEKIQARRGGLDRLGSSDATFRYFIESFPRTLLLQPDA 257

Query: 651 RIKPMIEFLEDTGVPKRCMRKVVLLYPPILFYDIE--KDIQPAYIKVKAEKNEFGRILLK 824
            +KPM+EF E  GVPK  M  + LL+PP++ YDI+  K    A  KV A   +FG+++ K
Sbjct: 258 HLKPMVEFFESLGVPKERMDSIFLLFPPVILYDIKVIKRKVLALEKVGAVDEDFGKMIFK 317

Query: 825 YPWILSSSIQRNYEEIHSFFDTKMV 899
           YPWILS+SIQ NY+EI SF D + V
Sbjct: 318 YPWILSTSIQDNYKEILSFCDAEKV 342


>gb|AAC17072.1| Similar to hypothetical protein gb|Z97336 from A. thaliana. This
           gene is probably cut off [Arabidopsis thaliana]
          Length = 600

 Score =  213 bits (542), Expect = 5e-53
 Identities = 125/256 (48%), Positives = 167/256 (65%), Gaps = 15/256 (5%)
 Frame = +3

Query: 177 PKYVQMLVDGVHEFETPNNIST------------LKERVYEMGQQKGDKGIAPFLESSFG 320
           PKY +M+V+GV + E  N+                KE+V  M +QKGD G   FLES  G
Sbjct: 99  PKYTRMIVEGVRDLEEWNSWKGSGESERVEEGLGFKEKVIYMVKQKGDGGKVAFLES-LG 157

Query: 321 MSLPSAMHFSRLCLASKRTLPHLIVKVSYLKEMLFSDDCDEYCNDIGKIARRMMMRLSIS 500
           +SL SAM+ +     S  +LP L+ KV YLKE+ FS   ++    +GK ARRMM+ LSI 
Sbjct: 158 LSLSSAMYLAHY--VSSESLPILLDKVKYLKEIFFSGSDEKGL--VGKYARRMMLYLSIP 213

Query: 501 VDDDALQQTLAFFEKTQARRGGLNLLGFGDASFRQLIQSFPRILLLPLETRIKPMIEFLE 680
           +D+D +QQTL+FFEK +ARRGGL++LG  DASFR L++SFPR+LLL  E  +KPM+EFLE
Sbjct: 214 IDED-VQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLE 272

Query: 681 DTGVPKRCMRKVVLLYPPILF---YDIEKDIQPAYIKVKAEKNEFGRILLKYPWILSSSI 851
             G+PK C+ KV+LLYPPI+     +I++ +  A  KV     + G++LLKYPWILS SI
Sbjct: 273 SIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSI 332

Query: 852 QRNYEEIHSFFDTKMV 899
           Q NY  I SFF ++ V
Sbjct: 333 QENYSHIGSFFYSESV 348


>ref|NP_178014.2| Mitochondrial transcription termination factor family protein
           [Arabidopsis thaliana] gi|110736356|dbj|BAF00147.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332198059|gb|AEE36180.1| Mitochondrial transcription
           termination factor family protein [Arabidopsis thaliana]
          Length = 591

 Score =  213 bits (542), Expect = 5e-53
 Identities = 125/256 (48%), Positives = 167/256 (65%), Gaps = 15/256 (5%)
 Frame = +3

Query: 177 PKYVQMLVDGVHEFETPNNIST------------LKERVYEMGQQKGDKGIAPFLESSFG 320
           PKY +M+V+GV + E  N+                KE+V  M +QKGD G   FLES  G
Sbjct: 99  PKYTRMIVEGVRDLEEWNSWKGSGESERVEEGLGFKEKVIYMVKQKGDGGKVAFLES-LG 157

Query: 321 MSLPSAMHFSRLCLASKRTLPHLIVKVSYLKEMLFSDDCDEYCNDIGKIARRMMMRLSIS 500
           +SL SAM+ +     S  +LP L+ KV YLKE+ FS   ++    +GK ARRMM+ LSI 
Sbjct: 158 LSLSSAMYLAHY--VSSESLPILLDKVKYLKEIFFSGSDEKGL--VGKYARRMMLYLSIP 213

Query: 501 VDDDALQQTLAFFEKTQARRGGLNLLGFGDASFRQLIQSFPRILLLPLETRIKPMIEFLE 680
           +D+D +QQTL+FFEK +ARRGGL++LG  DASFR L++SFPR+LLL  E  +KPM+EFLE
Sbjct: 214 IDED-VQQTLSFFEKIEARRGGLDMLGSVDASFRFLLESFPRLLLLSEENDMKPMVEFLE 272

Query: 681 DTGVPKRCMRKVVLLYPPILF---YDIEKDIQPAYIKVKAEKNEFGRILLKYPWILSSSI 851
             G+PK C+ KV+LLYPPI+     +I++ +  A  KV     + G++LLKYPWILS SI
Sbjct: 273 SIGIPKYCLGKVLLLYPPIMLGKTEEIKRRVATAMEKVSVVNKDSGKLLLKYPWILSPSI 332

Query: 852 QRNYEEIHSFFDTKMV 899
           Q NY  I SFF ++ V
Sbjct: 333 QENYSHIGSFFYSESV 348