BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029574
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Viti...   256   6e-66
ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding ...   255   1e-65
emb|CBI36672.3| unnamed protein product [Vitis vinifera]              249   5e-64
ref|XP_002319145.1| predicted protein [Populus trichocarpa] gi|2...   241   2e-61
ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucu...   236   8e-60

>ref|XP_002270244.2| PREDICTED: RNA-binding protein 40-like [Vitis vinifera]
           gi|298205172|emb|CBI17231.3| unnamed protein product
           [Vitis vinifera]
          Length = 463

 Score =  256 bits (654), Expect = 6e-66
 Identities = 147/275 (53%), Positives = 167/275 (60%), Gaps = 1/275 (0%)
 Frame = -1

Query: 964 LMNKMNIPAPFRMAXXXXXXXXXXXXXXXXXXXXXXXXXXPENSKVXXXXXXXXXXXXXX 785
           LMNKMNIPAPFRMA                           E+                 
Sbjct: 189 LMNKMNIPAPFRMALPTPPLPPPVPAPPPPPPPPEAARPNLEDLSSGESEMESSDEEV-- 246

Query: 784 XEVGDTERYKAVSASKIARPKRKRNKREDIVGPAVDKDVDHEAVGLKLATLTPKEIPMIK 605
               D   Y +    +  +P RKR KRE IVGP VDKDV HEAVG+K ATL PKEIPMIK
Sbjct: 247 ----DGNAY-STGPPRETKPGRKRVKREAIVGPGVDKDVAHEAVGVKPATLVPKEIPMIK 301

Query: 604 KNNPVLQIKIAPRQ-TQNXXXXXXXXXXXXXXXTNYNPKLYATXXXXXXXXXXXXXXLSL 428
           K NPVLQIKI P+  T++                +++ K YAT              LSL
Sbjct: 302 KKNPVLQIKIVPKVITEHKDECSIMKESEDSEKEDFDLKPYATLEELKSGKLPPEEILSL 361

Query: 427 PMFKNYTAGNPTNVLYIKNLSKDVVTDDFYFIFGAFFESIDVAKSNLSIKLMQEGRMRGQ 248
           PMFKNYTAGNP  VLYIKNL+KDVV DDFYFIFG+ F S+D AKS LS+KLMQEGRMRGQ
Sbjct: 362 PMFKNYTAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQ 421

Query: 247 AFLTFPSIELAHHALNVVNGYVYKGKPMIVQFGRN 143
           AF+TFPS+ELAHHALN+VNGYV+KGKPMI+QFGRN
Sbjct: 422 AFVTFPSVELAHHALNLVNGYVFKGKPMIIQFGRN 456


>ref|XP_003632078.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 40-like [Vitis
           vinifera]
          Length = 463

 Score =  255 bits (651), Expect = 1e-65
 Identities = 147/275 (53%), Positives = 166/275 (60%), Gaps = 1/275 (0%)
 Frame = -1

Query: 964 LMNKMNIPAPFRMAXXXXXXXXXXXXXXXXXXXXXXXXXXPENSKVXXXXXXXXXXXXXX 785
           LMNKMNIPAPFRMA                           E+                 
Sbjct: 189 LMNKMNIPAPFRMALPTPPIPPPVPAPPTPPPPPEAARPNLEDLSSGESEMESSDEEV-- 246

Query: 784 XEVGDTERYKAVSASKIARPKRKRNKREDIVGPAVDKDVDHEAVGLKLATLTPKEIPMIK 605
               D + Y      +  +P RKR KRE I GP VDKDV HEAVG+K ATL PKEIPMIK
Sbjct: 247 ----DGKAYSP-GPPRETKPGRKRVKREAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIK 301

Query: 604 KNNPVLQIKIAPRQ-TQNXXXXXXXXXXXXXXXTNYNPKLYATXXXXXXXXXXXXXXLSL 428
           K NPVLQIKIAP+  T++                +++ K YAT              LSL
Sbjct: 302 KKNPVLQIKIAPKVITEHKDECSIMKESEDSEKEDFDLKHYATLEELKSGKLPPEEILSL 361

Query: 427 PMFKNYTAGNPTNVLYIKNLSKDVVTDDFYFIFGAFFESIDVAKSNLSIKLMQEGRMRGQ 248
           PMFKNY AGNP  VLYIKNL+KDVV DDFYFIFG+ F S+D AKS LS+KLMQEGRMRGQ
Sbjct: 362 PMFKNYAAGNPAPVLYIKNLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQ 421

Query: 247 AFLTFPSIELAHHALNVVNGYVYKGKPMIVQFGRN 143
           AF+TFPS+ELAHHALNVVNGYV+KGKPMI+QFGRN
Sbjct: 422 AFVTFPSVELAHHALNVVNGYVFKGKPMIIQFGRN 456


>emb|CBI36672.3| unnamed protein product [Vitis vinifera]
          Length = 263

 Score =  249 bits (637), Expect = 5e-64
 Identities = 130/197 (65%), Positives = 146/197 (74%), Gaps = 1/197 (0%)
 Frame = -1

Query: 730 RPKRKRNKREDIVGPAVDKDVDHEAVGLKLATLTPKEIPMIKKNNPVLQIKIAPRQ-TQN 554
           +P RKR KRE I GP VDKDV HEAVG+K ATL PKEIPMIKK NPVLQIKIAP+  T++
Sbjct: 60  KPGRKRVKREAIAGPGVDKDVAHEAVGVKPATLVPKEIPMIKKKNPVLQIKIAPKVITEH 119

Query: 553 XXXXXXXXXXXXXXXTNYNPKLYATXXXXXXXXXXXXXXLSLPMFKNYTAGNPTNVLYIK 374
                           +++ K YAT              LSLPMFKNY AGNP  VLYIK
Sbjct: 120 KDECSIMKESEDSEKEDFDLKHYATLEELKSGKLPPEEILSLPMFKNYAAGNPAPVLYIK 179

Query: 373 NLSKDVVTDDFYFIFGAFFESIDVAKSNLSIKLMQEGRMRGQAFLTFPSIELAHHALNVV 194
           NL+KDVV DDFYFIFG+ F S+D AKS LS+KLMQEGRMRGQAF+TFPS+ELAHHALNVV
Sbjct: 180 NLAKDVVVDDFYFIFGSLFGSVDAAKSGLSVKLMQEGRMRGQAFVTFPSVELAHHALNVV 239

Query: 193 NGYVYKGKPMIVQFGRN 143
           NGYV+KGKPMI+QFGRN
Sbjct: 240 NGYVFKGKPMIIQFGRN 256


>ref|XP_002319145.1| predicted protein [Populus trichocarpa] gi|222857521|gb|EEE95068.1|
           predicted protein [Populus trichocarpa]
          Length = 346

 Score =  241 bits (614), Expect = 2e-61
 Identities = 143/275 (52%), Positives = 163/275 (59%), Gaps = 1/275 (0%)
 Frame = -1

Query: 964 LMNKMNIPAPFRMAXXXXXXXXXXXXXXXXXXXXXXXXXXPENSKVXXXXXXXXXXXXXX 785
           LMNKMNIPAPFRMA                           ENS +              
Sbjct: 72  LMNKMNIPAPFRMA----LPTPPLPLPPPSPPPPPPPPCLTENSSLAEQSSSESEMESSD 127

Query: 784 XEVGDTERYKAVSASKIARPKRKRNKREDIVGPAVDKDVDHEAVGLKLATLTPKEIPMIK 605
            EV D   Y    AS   + +RKR KR+ IVGPA DKDV HE+VGLK A+L PKEIP+IK
Sbjct: 128 EEVDDKAPY---GASGAVKQRRKRIKRKAIVGPAADKDVVHESVGLKPASLVPKEIPIIK 184

Query: 604 KNNPVLQIKIAPRQTQN-XXXXXXXXXXXXXXXTNYNPKLYATXXXXXXXXXXXXXXLSL 428
           K N VLQIKIAP+ T N                   + K YAT              LSL
Sbjct: 185 KKNTVLQIKIAPKVTHNEYKDDSIMTESEDPGTEGSDQKHYATAEEIESKRLVPEEILSL 244

Query: 427 PMFKNYTAGNPTNVLYIKNLSKDVVTDDFYFIFGAFFESIDVAKSNLSIKLMQEGRMRGQ 248
           P FKNYT GNP +VLYIKNL K+VV DDF++IFG+ F SID AKS LS+KLMQEGRMRGQ
Sbjct: 245 PKFKNYTVGNPASVLYIKNLDKEVVADDFFYIFGSLFGSIDAAKSGLSVKLMQEGRMRGQ 304

Query: 247 AFLTFPSIELAHHALNVVNGYVYKGKPMIVQFGRN 143
           AF+TF S+ELAH ALN+VNGYV+K KPMI+QFGRN
Sbjct: 305 AFVTFSSVELAHQALNLVNGYVFKDKPMIIQFGRN 339


>ref|XP_004139973.1| PREDICTED: RNA-binding protein 40-like [Cucumis sativus]
          Length = 359

 Score =  236 bits (601), Expect = 8e-60
 Identities = 137/275 (49%), Positives = 162/275 (58%), Gaps = 1/275 (0%)
 Frame = -1

Query: 964 LMNKMNIPAPFRMAXXXXXXXXXXXXXXXXXXXXXXXXXXPEN-SKVXXXXXXXXXXXXX 788
           LMNKMNIPAPFR+                               S+V             
Sbjct: 80  LMNKMNIPAPFRLPLPTPPLPPSIPAPPSPSLTLPPLPPPVTTRSQVTNMPSDESEMESS 139

Query: 787 XXEVGDTERYKAVSASKIARPKRKRNKREDIVGPAVDKDVDHEAVGLKLATLTPKEIPMI 608
             +V    +Y     SK A+   KR + E IVGP +DKDV HEAVG+K +TL PKEIPMI
Sbjct: 140 EEDVEG--KYNPSGVSKTAKSGYKRPRCETIVGPGIDKDVAHEAVGVKPSTLVPKEIPMI 197

Query: 607 KKNNPVLQIKIAPRQTQNXXXXXXXXXXXXXXXTNYNPKLYATXXXXXXXXXXXXXXLSL 428
           KK NPV+QI+IAP+   +                  + K YAT              LSL
Sbjct: 198 KKKNPVIQIRIAPKVIHDGKVGNINNDGEEAEKEADDLKPYATLEDLERGKLPPEEILSL 257

Query: 427 PMFKNYTAGNPTNVLYIKNLSKDVVTDDFYFIFGAFFESIDVAKSNLSIKLMQEGRMRGQ 248
           PMFKNYTAG PT+VLYIKNL+KDV+ DD Y+IFG+ FE ID AKS L++KLMQEGRMRGQ
Sbjct: 258 PMFKNYTAGTPTSVLYIKNLAKDVLNDDLYYIFGSLFEGIDEAKSALTVKLMQEGRMRGQ 317

Query: 247 AFLTFPSIELAHHALNVVNGYVYKGKPMIVQFGRN 143
           AF+TFPSIELA  ALN+VNGYV+KGKPMI+QFGRN
Sbjct: 318 AFVTFPSIELAQRALNLVNGYVFKGKPMIIQFGRN 352