BLASTX nr result

ID: Bupleurum21_contig00029559 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029559
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527793.1| expressed protein, putative [Ricinus communi...   332   1e-88
ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vini...   330   3e-88
emb|CBI37700.3| unnamed protein product [Vitis vinifera]              330   3e-88
ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|2...   328   2e-87
gb|AFK48477.1| unknown [Medicago truncatula]                          313   7e-83

>ref|XP_002527793.1| expressed protein, putative [Ricinus communis]
            gi|223532828|gb|EEF34603.1| expressed protein, putative
            [Ricinus communis]
          Length = 324

 Score =  332 bits (850), Expect = 1e-88
 Identities = 171/310 (55%), Positives = 221/310 (71%), Gaps = 1/310 (0%)
 Frame = +2

Query: 104  PITFSRFARRLA-LTSAYKVNRNVHKSQTKRYAPTGSSGGGVANFVMNNQNKETESSDGE 280
            P+T+S FAR +A L S+Y + R    ++    +P+ + G G+       +NK++ESS+ E
Sbjct: 16   PLTYSPFARSVAHLASSYLIKRQKLNNKLLGSSPS-ALGDGIIKHSSKEKNKQSESSEEE 74

Query: 281  EFDEDVQXXXXXXXXXXXXXHGVKVLLQNYLDDKQWDMSGLADLILGQTTVGTVVKIEED 460
            E +  +Q             HGVK+LLQ YLD+K+WD+SG  D+ILGQTTVGTVVKIE+D
Sbjct: 75   ELEGFIQADFVFFDPKPDDFHGVKILLQTYLDNKEWDLSGFVDIILGQTTVGTVVKIEDD 134

Query: 461  EDNGVYAVATVLNLGRYKDHKCITDIKEFMLGVCSERSAQQNLRDMLGEQAPEVGLLISQ 640
            ED G+++V TVLNL RYKDHKCI DIKEF++ VC ER+   +LR +LGEQA  VGLL+SQ
Sbjct: 135  ED-GLFSVTTVLNLRRYKDHKCIMDIKEFLIKVCLERNILDDLRLLLGEQAQYVGLLVSQ 193

Query: 641  RVVNXXXXXXXXXYDALFDEISWATEDEPTKELRSSFCFKYYLISTKIYQHKKLNNKHDR 820
            RVVN         YDALFDE+ WATEDEPT+ELR SFCFK YL+ TKIY+HK  + K  R
Sbjct: 194  RVVNLPPELLPPLYDALFDEVLWATEDEPTEELRKSFCFKSYLLITKIYKHKNADQK-KR 252

Query: 821  SSSSTEEAIIYTKPEEEIFHELCLWSFIYPLRTQQHTAHELKNYRIMGLVMAIEAIKVPT 1000
             SS  EEAIIY KPE+EIF++ C WSF +PL ++  T HEL+NYR+MGLVMA+EA ++  
Sbjct: 253  QSSDNEEAIIYIKPEDEIFYKHCSWSFCFPLHSEHVTTHELRNYRLMGLVMAVEADEISK 312

Query: 1001 FREKLRNLID 1030
            FRE+L +LID
Sbjct: 313  FREELHSLID 322


>ref|XP_002280163.2| PREDICTED: protein BCCIP homolog [Vitis vinifera]
          Length = 335

 Score =  330 bits (847), Expect = 3e-88
 Identities = 171/325 (52%), Positives = 223/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 68   MTRKITR---RLRNHPITFSRFARRLALTSAY-KVNRNVHKSQTKRYAPTGSSGGGVANF 235
            M RK TR     R  P TFS F R +A  ++Y K N  +H+S+  + +P  ++G G+ N 
Sbjct: 10   MPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNGIINH 69

Query: 236  VMNNQNKETESSDGEEFDEDVQXXXXXXXXXXXXXHGVKVLLQNYLDDKQWDMSGLADLI 415
             +  +++++E SD +  +   Q             HGVK+LLQ YLD+K WD+SG  DLI
Sbjct: 70   TLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGFVDLI 129

Query: 416  LGQTTVGTVVKIEEDEDNGVYAVATVLNLGRYKDHKCITDIKEFMLGVCSERSAQQNLRD 595
            LGQTTVGTVVKIE DED+GV+++ T LNLGRYK HKC+ ++KEF+L V  E+  +  LR 
Sbjct: 130  LGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKDALRL 189

Query: 596  MLGEQAPEVGLLISQRVVNXXXXXXXXXYDALFDEISWATEDEPTKELRSSFCFKYYLIS 775
            +LGE+A  VGLL+SQRVVN         YDALFDEISWATEDEPT+ELRSSFCFK++L+ 
Sbjct: 190  LLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKFFLLI 249

Query: 776  TKIYQHKKLNNKHDRSSSSTEEAIIYTKPEEEIFHELCLWSFIYPLRTQQHTAHELKNYR 955
            ++IY+HK    +   +    +EAIIY KPE+EIFH+L  WSF +PL TQ  T HEL+NYR
Sbjct: 250  SRIYKHKNAGQRKG-TRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHELRNYR 308

Query: 956  IMGLVMAIEAIKVPTFREKLRNLID 1030
            +MGLVMAIEA KV TFR++L  LID
Sbjct: 309  LMGLVMAIEADKVSTFRKELHTLID 333


>emb|CBI37700.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  330 bits (847), Expect = 3e-88
 Identities = 171/325 (52%), Positives = 223/325 (68%), Gaps = 4/325 (1%)
 Frame = +2

Query: 68   MTRKITR---RLRNHPITFSRFARRLALTSAY-KVNRNVHKSQTKRYAPTGSSGGGVANF 235
            M RK TR     R  P TFS F R +A  ++Y K N  +H+S+  + +P  ++G G+ N 
Sbjct: 63   MPRKPTRCRPSPRPLPFTFSPFFRTVAQVASYCKANHQIHESKFHKKSPPNAAGNGIINH 122

Query: 236  VMNNQNKETESSDGEEFDEDVQXXXXXXXXXXXXXHGVKVLLQNYLDDKQWDMSGLADLI 415
             +  +++++E SD +  +   Q             HGVK+LLQ YLD+K WD+SG  DLI
Sbjct: 123  TLEEKSEQSEYSDEDCSEVVAQANFAFFDPKPDDFHGVKILLQTYLDNKLWDLSGFVDLI 182

Query: 416  LGQTTVGTVVKIEEDEDNGVYAVATVLNLGRYKDHKCITDIKEFMLGVCSERSAQQNLRD 595
            LGQTTVGTVVKIE DED+GV+++ T LNLGRYK HKC+ ++KEF+L V  E+  +  LR 
Sbjct: 183  LGQTTVGTVVKIEGDEDDGVFSLITALNLGRYKGHKCVMELKEFLLDVGQEKDVKDALRL 242

Query: 596  MLGEQAPEVGLLISQRVVNXXXXXXXXXYDALFDEISWATEDEPTKELRSSFCFKYYLIS 775
            +LGE+A  VGLL+SQRVVN         YDALFDEISWATEDEPT+ELRSSFCFK++L+ 
Sbjct: 243  LLGEEAQNVGLLVSQRVVNLPPQLLPPLYDALFDEISWATEDEPTEELRSSFCFKFFLLI 302

Query: 776  TKIYQHKKLNNKHDRSSSSTEEAIIYTKPEEEIFHELCLWSFIYPLRTQQHTAHELKNYR 955
            ++IY+HK    +   +    +EAIIY KPE+EIFH+L  WSF +PL TQ  T HEL+NYR
Sbjct: 303  SRIYKHKNAGQRKG-TRVDIDEAIIYIKPEDEIFHKLSSWSFSFPLHTQHVTTHELRNYR 361

Query: 956  IMGLVMAIEAIKVPTFREKLRNLID 1030
            +MGLVMAIEA KV TFR++L  LID
Sbjct: 362  LMGLVMAIEADKVSTFRKELHTLID 386


>ref|XP_002300556.1| predicted protein [Populus trichocarpa] gi|222847814|gb|EEE85361.1|
            predicted protein [Populus trichocarpa]
          Length = 337

 Score =  328 bits (840), Expect = 2e-87
 Identities = 175/336 (52%), Positives = 229/336 (68%), Gaps = 15/336 (4%)
 Frame = +2

Query: 68   MTRKITRRLRN---HPITFSRFARRLA------------LTSAYKVNRNVHKSQTKRYAP 202
            M RK TRR R+    P+TF+ F+R LA            L S    + + ++      + 
Sbjct: 1    MPRKPTRRRRSLIARPLTFAPFSRSLAHLHSTFMPKHQMLGSKVPGSPSHNEGVPDSISL 60

Query: 203  TGSSGGGVANFVMNNQNKETESSDGEEFDEDVQXXXXXXXXXXXXXHGVKVLLQNYLDDK 382
            T   GG V       + +++ESS+ EEF  +VQ             HGVK+LLQ+YLD+ 
Sbjct: 61   TLYQGGAVVKKTSKEKIEQSESSEEEEFGGEVQADFAFFDPKPDDFHGVKILLQSYLDNT 120

Query: 383  QWDMSGLADLILGQTTVGTVVKIEEDEDNGVYAVATVLNLGRYKDHKCITDIKEFMLGVC 562
            +WD+SG  DLIL QTTVGTVVKIE+DEDNG+++V + LNLGRYKDHKCI D+KE++L +C
Sbjct: 121  EWDLSGFVDLILEQTTVGTVVKIEDDEDNGLFSVVSALNLGRYKDHKCIADLKEYLLKLC 180

Query: 563  SERSAQQNLRDMLGEQAPEVGLLISQRVVNXXXXXXXXXYDALFDEISWATEDEPTKELR 742
             E+S + +LR +LGEQA  VGLL+S+RVVN         YD+LFDEISWATEDEPT+ELR
Sbjct: 181  LEKSIKGDLRVLLGEQAHNVGLLVSRRVVNLPPQLLPPLYDSLFDEISWATEDEPTEELR 240

Query: 743  SSFCFKYYLISTKIYQHKKLNNKHDRSSSSTEEAIIYTKPEEEIFHELCLWSFIYPLRTQ 922
            +SFCF  Y++ +K+Y+HK  + K +R SS +EEAIIY  PE+EIFH+L LWSF +P   +
Sbjct: 241  NSFCFNSYVLVSKMYKHKNADKK-NRLSSDSEEAIIYVNPEDEIFHKLSLWSFNFPFHAE 299

Query: 923  QHTAHELKNYRIMGLVMAIEAIKVPTFREKLRNLID 1030
            Q TA ELKNYR MGLVMA+EA K+ TFRE+LR+LID
Sbjct: 300  QVTARELKNYRPMGLVMAVEADKISTFREQLRSLID 335


>gb|AFK48477.1| unknown [Medicago truncatula]
          Length = 333

 Score =  313 bits (801), Expect = 7e-83
 Identities = 167/325 (51%), Positives = 217/325 (66%), Gaps = 4/325 (1%)
 Frame = +2

Query: 68   MTRKITRRLR--NHPITFSRFARRLA-LTSAYKVNRNVHKSQTKRYAPTGSSGGGVANFV 238
            M RK  R+ R  + P+TFS FAR LA + S  K NR     ++       S+  G +   
Sbjct: 1    MPRKPRRKQRPKSWPVTFSPFARALARMASVSKPNRRSKSIESSEKPTRSSTSNGSSKHT 60

Query: 239  MNNQNKETESSDGEEFDEDVQXXXXXXXXXXXXXHGVKVLLQNYLDDKQWDMSGLADLIL 418
            +  + + +ESSDGE FD  VQ             HGVK LLQ YLD ++WD+SG ADLIL
Sbjct: 61   LEERPEGSESSDGE-FDGVVQADFAFFDPKPNDFHGVKTLLQTYLDVEEWDLSGFADLIL 119

Query: 419  GQTTVGTVVKIEEDEDNGVYAVATVLNLGRYKDHKCITDIKEFMLGVCS-ERSAQQNLRD 595
             QTTVGTVVK+E+DED GV+A+AT LNL RY++ +CI  +KEF+L   S E+     LR 
Sbjct: 120  EQTTVGTVVKVEDDEDEGVFALATALNLWRYREQRCIMKLKEFLLLKASQEKGVGDQLRL 179

Query: 596  MLGEQAPEVGLLISQRVVNXXXXXXXXXYDALFDEISWATEDEPTKELRSSFCFKYYLIS 775
            +LGE+A  VGLL+SQRVVN         YD+LF+E+SWATEDEPT++LR+SF FK+Y+I 
Sbjct: 180  LLGERAHNVGLLVSQRVVNLPPQLLPHLYDSLFNEVSWATEDEPTEDLRNSFQFKHYIIL 239

Query: 776  TKIYQHKKLNNKHDRSSSSTEEAIIYTKPEEEIFHELCLWSFIYPLRTQQHTAHELKNYR 955
            +KIY+HK    +  + S   EE I+Y KPE+EIFHEL  WSF +PLRTQQ   HELKNYR
Sbjct: 240  SKIYKHKNAEQQKRKRSDDREEEIVYVKPEDEIFHELSSWSFCFPLRTQQPAPHELKNYR 299

Query: 956  IMGLVMAIEAIKVPTFREKLRNLID 1030
             MGL+M +EA K+PTFR++L +LI+
Sbjct: 300  SMGLIMTVEADKIPTFRQQLASLIN 324


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