BLASTX nr result

ID: Bupleurum21_contig00029538 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029538
         (361 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]    74   1e-11
emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]    72   4e-11
ref|XP_002509827.1| conserved hypothetical protein [Ricinus comm...    70   2e-10
gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Grou...    68   9e-10
gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indi...    67   1e-09

>emb|CAN66607.1| hypothetical protein VITISV_017554 [Vitis vinifera]
          Length = 2822

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 33/89 (37%), Positives = 54/89 (60%)
 Frame = -1

Query: 268 NPGAAFKPPKVDFPRFDGKDPRSWVSKCDKYFQLNPTLDPRGKVICASIYMEGEADIWFR 89
           N G   +  ++DFP+F+G+DP  WV + D++F  + T +P  +V+ AS +MEG+A +WF+
Sbjct: 46  NGGIQTRAVRLDFPKFNGEDPSGWVYRADQFFNYHQT-NPHHRVLLASFHMEGKALVWFQ 104

Query: 88  ALEEEKPFLLWNEFVKQVCNRFSKTGYEN 2
            +E       W  FV+ +  RF  + YEN
Sbjct: 105 DIEAAGGISSWEGFVRALQTRFGSSPYEN 133


>emb|CAN76793.1| hypothetical protein VITISV_026680 [Vitis vinifera]
          Length = 1469

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 32/89 (35%), Positives = 54/89 (60%)
 Frame = -1

Query: 268 NPGAAFKPPKVDFPRFDGKDPRSWVSKCDKYFQLNPTLDPRGKVICASIYMEGEADIWFR 89
           N G   +  ++DFP+F+G+DP  WV + D++F  + T +P  +V+ AS +MEG+A +WF+
Sbjct: 81  NGGIQTRAVRLDFPKFNGEDPNGWVYRADQFFNYHQT-NPHHRVLLASFHMEGKALVWFQ 139

Query: 88  ALEEEKPFLLWNEFVKQVCNRFSKTGYEN 2
            +E       W  FV+ +  RF  + YE+
Sbjct: 140 DIEAAGGISSWEGFVRALQTRFGSSPYED 168


>ref|XP_002509827.1| conserved hypothetical protein [Ricinus communis]
           gi|223549726|gb|EEF51214.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 208

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/124 (31%), Positives = 66/124 (53%), Gaps = 5/124 (4%)
 Frame = -1

Query: 358 VPNPSM-SSNTQLYTHNQVWNPC----DTNRNRNFNPGAAFKPPKVDFPRFDGKDPRSWV 194
           +P+PS+ + N    T  Q+         TN N +F      + PKV+   F+G +PR W+
Sbjct: 67  LPSPSIINRNINGQTRPQIGQSAAEFGQTNWNSSFGSMGG-RIPKVELSHFEGNNPRLWI 125

Query: 193 SKCDKYFQLNPTLDPRGKVICASIYMEGEADIWFRALEEEKPFLLWNEFVKQVCNRFSKT 14
            KC+KYFQL  ++    K+  AS+Y+   ADIW++  + +     W +F +++C RF + 
Sbjct: 126 KKCEKYFQLY-SIPNEQKIDIASLYLGDRADIWYQGWQAQTRSSDWGKFSEELCRRFGEL 184

Query: 13  GYEN 2
             E+
Sbjct: 185 TIED 188


>gb|AAN59764.1| Putative retroelement [Oryza sativa Japonica Group]
           gi|108706657|gb|ABF94452.1| retrotransposon protein,
           putative, unclassified [Oryza sativa Japonica Group]
          Length = 1021

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 31/80 (38%), Positives = 44/80 (55%)
 Frame = -1

Query: 244 PKVDFPRFDGKDPRSWVSKCDKYFQLNPTLDPRGKVICASIYMEGEADIWFRALEEEKPF 65
           PK+DFP+FDG DP  W  +C+ YF +N T  P   V  A+IY  G A  W R+ +    F
Sbjct: 231 PKLDFPKFDGTDPEDWRMRCEHYFDVNNTF-PGLWVRIATIYFSGRAASWLRSTKAHVRF 289

Query: 64  LLWNEFVKQVCNRFSKTGYE 5
            +W  F   + N+F +  +E
Sbjct: 290 PIWENFCVAMSNKFDRDQHE 309


>gb|EAZ01809.1| hypothetical protein OsI_23834 [Oryza sativa Indica Group]
           gi|125597977|gb|EAZ37757.1| hypothetical protein
           OsJ_22094 [Oryza sativa Japonica Group]
          Length = 310

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 30/76 (39%), Positives = 44/76 (57%)
 Frame = -1

Query: 247 PPKVDFPRFDGKDPRSWVSKCDKYFQLNPTLDPRGKVICASIYMEGEADIWFRALEEEKP 68
           P K +FP F+G+ P +W+ K +KYF L  T +   KV+ A +Y+ G+AD W  + +    
Sbjct: 114 PKKFNFPEFNGEHPEAWIRKANKYFSLTKTPEEE-KVLVAEVYITGKADQWIDSYDIPTE 172

Query: 67  FLLWNEFVKQVCNRFS 20
            L W EF   VC RF+
Sbjct: 173 TLTWPEFCTMVCKRFA 188