BLASTX nr result

ID: Bupleurum21_contig00029532 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029532
         (459 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]   128   5e-28
ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|2...   125   3e-27
ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27
ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27

>emb|CAN71391.1| hypothetical protein VITISV_038145 [Vitis vinifera]
          Length = 579

 Score =  128 bits (321), Expect = 5e-28
 Identities = 65/122 (53%), Positives = 82/122 (67%), Gaps = 6/122 (4%)
 Frame = +3

Query: 6   MVKLTSTNYSIWRPMMEDLLYCKDLFDPIET------TTKDDGTISXXXXXXXXXXXDWG 167
           M+KL ++NYSIW+  M+D+LYCK+LF+PIE       TT +D               +W 
Sbjct: 8   MIKLIASNYSIWKTRMKDILYCKELFEPIECRGYKPITTIED---------------EWK 52

Query: 168 KLKRKTLGTIRQWVDISIFNHVSQESDPYDLWKKLEGLYERKTAHNKASLIKRLVNLKLK 347
           KL RKT+G IRQWVD S+F+HV++E D Y LW+KLE LYERKT   KA +IKRLVNLK K
Sbjct: 53  KLNRKTVGXIRQWVDQSVFHHVAKEVDAYSLWQKLESLYERKTTQXKAFIIKRLVNLKYK 112

Query: 348 GG 353
            G
Sbjct: 113 DG 114


>ref|XP_002314389.1| predicted protein [Populus trichocarpa] gi|222863429|gb|EEF00560.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  127 bits (318), Expect = 1e-27
 Identities = 68/153 (44%), Positives = 88/153 (57%), Gaps = 2/153 (1%)
 Frame = +3

Query: 6   MVKLTSTNYSIWRPMMEDLLYCKDLFDPIETT--TKDDGTISXXXXXXXXXXXDWGKLKR 179
           M+KLTS+NY +W+ MMED LYC DL  PIE      DD                W  L R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLDLPIECKGIKPDD-----------MDDAKWNGLNR 56

Query: 180 KTLGTIRQWVDISIFNHVSQESDPYDLWKKLEGLYERKTAHNKASLIKRLVNLKLKGGKS 359
           K    +R+WV     NH+SQE D Y +WK LE  + +K+A NK  +I+ LVNLK K G+ 
Sbjct: 57  KATANVRKWVSSKSINHISQEHDCYTIWKMLEETFAKKSAQNKVFVIRDLVNLKYKDGED 116

Query: 360 VSEHLSDFQDIINKLTTMKIVLDDELQALFLLS 458
            S H++ FQ   N+L+ M + L DE+QAL LLS
Sbjct: 117 ASVHINIFQGFFNQLSLMNLELADEMQALILLS 149


>ref|XP_002309902.1| predicted protein [Populus trichocarpa] gi|222852805|gb|EEE90352.1|
           predicted protein [Populus trichocarpa]
          Length = 291

 Score =  125 bits (315), Expect = 3e-27
 Identities = 67/153 (43%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
 Frame = +3

Query: 6   MVKLTSTNYSIWRPMMEDLLYCKDLFDPIETT--TKDDGTISXXXXXXXXXXXDWGKLKR 179
           M+KLTS+NY +W+ MMED LYC DL  PIE      DD                W  L R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDD-----------MDDAKWNGLNR 56

Query: 180 KTLGTIRQWVDISIFNHVSQESDPYDLWKKLEGLYERKTAHNKASLIKRLVNLKLKGGKS 359
           K    +R+WV     NH+SQE D Y +WK LE  + +++A NK  +IK LVNLK + G+ 
Sbjct: 57  KATANVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIKDLVNLKYRDGED 116

Query: 360 VSEHLSDFQDIINKLTTMKIVLDDELQALFLLS 458
            S H++ FQ  +N+L+ M + L DE+QAL LLS
Sbjct: 117 ASVHINVFQGFLNQLSLMNLELADEMQALILLS 149


>ref|XP_002312968.1| predicted protein [Populus trichocarpa] gi|222849376|gb|EEE86923.1|
           predicted protein [Populus trichocarpa]
          Length = 371

 Score =  124 bits (312), Expect = 6e-27
 Identities = 64/151 (42%), Positives = 88/151 (58%)
 Frame = +3

Query: 6   MVKLTSTNYSIWRPMMEDLLYCKDLFDPIETTTKDDGTISXXXXXXXXXXXDWGKLKRKT 185
           M+KLTS+NY +W+ MMED LYC DL  PIE        +             W  L RK 
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPNDMDDAK---------WNGLNRKA 58

Query: 186 LGTIRQWVDISIFNHVSQESDPYDLWKKLEGLYERKTAHNKASLIKRLVNLKLKGGKSVS 365
              +R+WV     NH+SQE D Y +WK LE  + +++A NK  +I+ LVNLK + G+  S
Sbjct: 59  TANVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGEDAS 118

Query: 366 EHLSDFQDIINKLTTMKIVLDDELQALFLLS 458
            H++ FQ  +N+L+ M + L DE+QAL LLS
Sbjct: 119 VHINVFQGFLNQLSLMNLELADEMQALILLS 149


>ref|XP_002298374.1| predicted protein [Populus trichocarpa] gi|222845632|gb|EEE83179.1|
           predicted protein [Populus trichocarpa]
          Length = 335

 Score =  124 bits (312), Expect = 6e-27
 Identities = 66/153 (43%), Positives = 89/153 (58%), Gaps = 2/153 (1%)
 Frame = +3

Query: 6   MVKLTSTNYSIWRPMMEDLLYCKDLFDPIETT--TKDDGTISXXXXXXXXXXXDWGKLKR 179
           M+KLTS+NY +W+ MMED LYC DL  PIE      DD                W  L R
Sbjct: 8   MIKLTSSNYFLWKTMMEDHLYCNDLALPIECKGIKPDD-----------MDDAKWNGLNR 56

Query: 180 KTLGTIRQWVDISIFNHVSQESDPYDLWKKLEGLYERKTAHNKASLIKRLVNLKLKGGKS 359
           K    +R+WV     NH+SQE D Y +WK LE  + +++A NK  +I+ LVNLK + G+ 
Sbjct: 57  KATANVRKWVSSKSINHISQEHDCYTVWKLLEETFAKESAQNKVFVIRDLVNLKYRDGED 116

Query: 360 VSEHLSDFQDIINKLTTMKIVLDDELQALFLLS 458
            S H++ FQ  +N+L+ M + L DE+QAL LLS
Sbjct: 117 ASVHINVFQGFLNQLSLMNLELADEMQALILLS 149


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