BLASTX nr result
ID: Bupleurum21_contig00029529
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00029529 (541 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi... 226 2e-57 gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi... 226 2e-57 gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal... 226 2e-57 emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] 224 7e-57 gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] 223 2e-56 >gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1352 Score = 226 bits (575), Expect = 2e-57 Identities = 110/180 (61%), Positives = 133/180 (73%) Frame = +1 Query: 1 ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180 +L+KF+M + V TP E +KL E V+PT FKSLVGSLRYLT TRPDI+YAVG+ Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149 Query: 181 VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360 VSRYME P HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209 Query: 361 GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540 G+ F+IG F+W SKKQ V LSTCEAEY+AA C C A+WL +L EL+L +E+P I Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269 >gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana] gi|12321387|gb|AAG50765.1|AC079131_10 copia-type polyprotein, putative [Arabidopsis thaliana] Length = 1320 Score = 226 bits (575), Expect = 2e-57 Identities = 110/180 (61%), Positives = 133/180 (73%) Frame = +1 Query: 1 ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180 +L+KF+M + V TP E +KL E V+PT FKSLVGSLRYLT TRPDI+YAVG+ Sbjct: 1058 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1117 Query: 181 VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360 VSRYME P HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS Sbjct: 1118 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1177 Query: 361 GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540 G+ F+IG F+W SKKQ V LSTCEAEY+AA C C A+WL +L EL+L +E+P I Sbjct: 1178 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1237 >gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana] Length = 1352 Score = 226 bits (575), Expect = 2e-57 Identities = 110/180 (61%), Positives = 133/180 (73%) Frame = +1 Query: 1 ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180 +L+KF+M + V TP E +KL E V+PT FKSLVGSLRYLT TRPDI+YAVG+ Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149 Query: 181 VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360 VSRYME P HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209 Query: 361 GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540 G+ F+IG F+W SKKQ V LSTCEAEY+AA C C A+WL +L EL+L +E+P I Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269 >emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana] Length = 1352 Score = 224 bits (571), Expect = 7e-57 Identities = 109/180 (60%), Positives = 133/180 (73%) Frame = +1 Query: 1 ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180 +L+KF++ + V TP E +KL E V+PT FKSLVGSLRYLT TRPDI+YAVG+ Sbjct: 1090 VLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149 Query: 181 VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360 VSRYME P HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209 Query: 361 GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540 G+ F+IG F+W SKKQ V LSTCEAEY+AA C C A+WL +L EL+L +E+P I Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269 >gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana] Length = 1291 Score = 223 bits (567), Expect = 2e-56 Identities = 109/180 (60%), Positives = 132/180 (73%) Frame = +1 Query: 1 ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180 +L+KF+M + V TP E +KL E V+PT FKSLVGSLRYLT TRPDI+YAVG+ Sbjct: 1029 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1088 Query: 181 VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360 VSRYME P HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+G D+DD KSTS Sbjct: 1089 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTS 1148 Query: 361 GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540 G+ F+IG F+W SKKQ V LSTCEAEY+AA C C A+WL +L EL+L +E+P I Sbjct: 1149 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1208