BLASTX nr result

ID: Bupleurum21_contig00029529 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029529
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabi...   226   2e-57
gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabi...   226   2e-57
gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thal...   226   2e-57
emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]         224   7e-57
gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]             223   2e-56

>gb|AAG60117.1|AC073555_1 copia-type polyprotein, putative [Arabidopsis thaliana]
          Length = 1352

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/180 (61%), Positives = 133/180 (73%)
 Frame = +1

Query: 1    ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180
            +L+KF+M +   V TP E  +KL      E V+PT FKSLVGSLRYLT TRPDI+YAVG+
Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 181  VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360
            VSRYME P   HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 361  GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540
            G+ F+IG   F+W SKKQ  V LSTCEAEY+AA  C C A+WL  +L EL+L +E+P  I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVVLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269


>gb|AAG50698.1|AC079604_5 copia-type polyprotein, putative [Arabidopsis thaliana]
            gi|12321387|gb|AAG50765.1|AC079131_10 copia-type
            polyprotein, putative [Arabidopsis thaliana]
          Length = 1320

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/180 (61%), Positives = 133/180 (73%)
 Frame = +1

Query: 1    ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180
            +L+KF+M +   V TP E  +KL      E V+PT FKSLVGSLRYLT TRPDI+YAVG+
Sbjct: 1058 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1117

Query: 181  VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360
            VSRYME P   HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS
Sbjct: 1118 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1177

Query: 361  GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540
            G+ F+IG   F+W SKKQ  V LSTCEAEY+AA  C C A+WL  +L EL+L +E+P  I
Sbjct: 1178 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1237


>gb|AAD50001.1|AC007259_14 Hypothetical protein [Arabidopsis thaliana]
          Length = 1352

 Score =  226 bits (575), Expect = 2e-57
 Identities = 110/180 (61%), Positives = 133/180 (73%)
 Frame = +1

Query: 1    ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180
            +L+KF+M +   V TP E  +KL      E V+PT FKSLVGSLRYLT TRPDI+YAVG+
Sbjct: 1090 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 181  VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360
            VSRYME P   HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 361  GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540
            G+ F+IG   F+W SKKQ  V LSTCEAEY+AA  C C A+WL  +L EL+L +E+P  I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269


>emb|CAB71063.1| copia-type polyprotein [Arabidopsis thaliana]
          Length = 1352

 Score =  224 bits (571), Expect = 7e-57
 Identities = 109/180 (60%), Positives = 133/180 (73%)
 Frame = +1

Query: 1    ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180
            +L+KF++ +   V TP E  +KL      E V+PT FKSLVGSLRYLT TRPDI+YAVG+
Sbjct: 1090 VLKKFKIDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1149

Query: 181  VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360
            VSRYME P   HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+GGD+DD KSTS
Sbjct: 1150 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGGDVDDRKSTS 1209

Query: 361  GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540
            G+ F+IG   F+W SKKQ  V LSTCEAEY+AA  C C A+WL  +L EL+L +E+P  I
Sbjct: 1210 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1269


>gb|AAF16534.1|AC013482_8 T26F17.17 [Arabidopsis thaliana]
          Length = 1291

 Score =  223 bits (567), Expect = 2e-56
 Identities = 109/180 (60%), Positives = 132/180 (73%)
 Frame = +1

Query: 1    ILRKFRMQECKIVSTPAEASMKLRINSTRESVNPTLFKSLVGSLRYLTFTRPDIMYAVGL 180
            +L+KF+M +   V TP E  +KL      E V+PT FKSLVGSLRYLT TRPDI+YAVG+
Sbjct: 1029 VLKKFKMDDSNPVCTPMECGIKLSKKEEGEGVDPTTFKSLVGSLRYLTCTRPDILYAVGV 1088

Query: 181  VSRYMEKPKQDHFMAAKRILRYIKGTLDHGLFYTHSQDSKLVGYPDSDYGGDLDDGKSTS 360
            VSRYME P   HF AAKRILRYIKGT++ GL Y+ + D KLVGY DSD+G D+DD KSTS
Sbjct: 1089 VSRYMEHPTTTHFKAAKRILRYIKGTVNFGLHYSTTSDYKLVGYSDSDWGRDVDDRKSTS 1148

Query: 361  GYAFHIGSAIFSWSSKKQQTVALSTCEAEYMAAAGCACQAMWLGYILGELNLAKEDPVTI 540
            G+ F+IG   F+W SKKQ  V LSTCEAEY+AA  C C A+WL  +L EL+L +E+P  I
Sbjct: 1149 GFVFYIGDTAFTWMSKKQPIVTLSTCEAEYVAATSCVCHAIWLRNLLKELSLPQEEPTKI 1208