BLASTX nr result

ID: Bupleurum21_contig00029528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029528
         (545 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossyp...   246   1e-63
ref|XP_003552347.1| PREDICTED: fasciclin-like arabinogalactan pr...   246   2e-63
ref|XP_002511740.1| conserved hypothetical protein [Ricinus comm...   244   8e-63
ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan pr...   243   1e-62
dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hy...   243   1e-62

>gb|ABV27484.1| fasciclin-like arabinogalactan protein 13 [Gossypium hirsutum]
          Length = 425

 Score =  246 bits (629), Expect = 1e-63
 Identities = 125/184 (67%), Positives = 150/184 (81%), Gaps = 3/184 (1%)
 Frame = -2

Query: 544 VVSNGALATLAGK-PLSVIKNALSLHVLLDYFDAKKLHGVPDGSTLSTTLYQTTGNAQNK 368
           V++NGA++ L  K PLSV+KN LSLHVLLDY+D +KLH + DG+TL+TTLYQTTGNA   
Sbjct: 62  VLNNGAMSALTSKHPLSVVKNILSLHVLLDYYDPQKLHKISDGTTLTTTLYQTTGNAPGN 121

Query: 367 IGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEIST--XXXXXXXXXXX 194
           +GFVNITDL+GG+VGFGS I GSKLDSSYTK +KQ+PYN S++EIS              
Sbjct: 122 LGFVNITDLQGGKVGFGSAIPGSKLDSSYTKSVKQIPYNISILEISAPIIAPGILTAPAP 181

Query: 193 PSSDLNITALLEKAGCKTFAGLLSSTGVLKTYQSAITKGLTVFAPNDEAFKAKGLPDLSK 14
            SS +NIT LLEKAGCKTFA LL+S+GVLKTY+SA+ KGLTVFAP+DEAFKA+G+PDLSK
Sbjct: 182 SSSGVNITGLLEKAGCKTFASLLTSSGVLKTYESALDKGLTVFAPSDEAFKAEGVPDLSK 241

Query: 13  LTNA 2
           LTNA
Sbjct: 242 LTNA 245


>ref|XP_003552347.1| PREDICTED: fasciclin-like arabinogalactan protein 8-like [Glycine
           max]
          Length = 416

 Score =  246 bits (627), Expect = 2e-63
 Identities = 125/183 (68%), Positives = 148/183 (80%), Gaps = 2/183 (1%)
 Frame = -2

Query: 544 VVSNGALATLAGK-PLSVIKNALSLHVLLDYFDAKKLHGVPDGSTLSTTLYQTTGNAQNK 368
           V++N AL+ +A K PLSV+KN LSLH+LLDYFD  KLH +P+G+TLSTTLYQTTGNA   
Sbjct: 58  VLNNAALSAVAAKHPLSVVKNLLSLHILLDYFDNTKLHQIPNGTTLSTTLYQTTGNANGN 117

Query: 367 IGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEIST-XXXXXXXXXXXP 191
           +G VNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS             P
Sbjct: 118 VGSVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVMEISAPIISPGILAAPPP 177

Query: 190 SSDLNITALLEKAGCKTFAGLLSSTGVLKTYQSAITKGLTVFAPNDEAFKAKGLPDLSKL 11
           S+D+NITAL+EKAGCKTFA L+SS G++KT+QS   KGLT+FAPNDEAFKAKG+PDLSKL
Sbjct: 178 SADVNITALIEKAGCKTFASLISSNGLIKTFQSTADKGLTIFAPNDEAFKAKGVPDLSKL 237

Query: 10  TNA 2
           TNA
Sbjct: 238 TNA 240


>ref|XP_002511740.1| conserved hypothetical protein [Ricinus communis]
           gi|223548920|gb|EEF50409.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 425

 Score =  244 bits (622), Expect = 8e-63
 Identities = 127/183 (69%), Positives = 145/183 (79%), Gaps = 3/183 (1%)
 Frame = -2

Query: 541 VSNGALATLAGK-PLSVIKNALSLHVLLDYFDAKKLHGVPDGSTLSTTLYQTTGNAQNKI 365
           +SNGA++ LA K PLSVIKNALSL VLLDY+D  KLH +  G+TLSTTLYQTTGNA   +
Sbjct: 63  LSNGAMSALASKHPLSVIKNALSLLVLLDYYDPSKLHQISKGTTLSTTLYQTTGNAPGNL 122

Query: 364 GFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEIST--XXXXXXXXXXXP 191
           GFVNITDL+GG+VGFGS   GSKLDSSYTK +KQ+PYN SV+E+S               
Sbjct: 123 GFVNITDLQGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVIEVSAPIVAPGIFTAPAPS 182

Query: 190 SSDLNITALLEKAGCKTFAGLLSSTGVLKTYQSAITKGLTVFAPNDEAFKAKGLPDLSKL 11
            SD+NIT LLEKAGCKTFAGLL S+GVLKTYQSA  KGLT+FAPNDEAFKA G+PDLSKL
Sbjct: 183 PSDVNITGLLEKAGCKTFAGLLLSSGVLKTYQSAADKGLTIFAPNDEAFKAAGVPDLSKL 242

Query: 10  TNA 2
           +NA
Sbjct: 243 SNA 245


>ref|XP_002270426.2| PREDICTED: fasciclin-like arabinogalactan protein 10-like [Vitis
           vinifera]
          Length = 416

 Score =  243 bits (620), Expect = 1e-62
 Identities = 126/184 (68%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
 Frame = -2

Query: 544 VVSNGALATLAGK-PLSVIKNALSLHVLLDYFDAKKLHGVPDGSTLSTTLYQTTGNAQNK 368
           V++N A++ LAGK PLSVIK AL L V+LDY+D KKLH + DG+TLSTTLYQTTGNA   
Sbjct: 59  VLNNAAMSALAGKHPLSVIKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGN 118

Query: 367 IGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEIST--XXXXXXXXXXX 194
           +GFVNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS              
Sbjct: 119 LGFVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGLLTAPAP 178

Query: 193 PSSDLNITALLEKAGCKTFAGLLSSTGVLKTYQSAITKGLTVFAPNDEAFKAKGLPDLSK 14
            +SD+NIT LLEKAGCKTFA LL STGV+K Y+SA+ KGLTVFAPNDEAFKA G+PDL+K
Sbjct: 179 SASDVNITGLLEKAGCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADGVPDLTK 238

Query: 13  LTNA 2
           LTNA
Sbjct: 239 LTNA 242


>dbj|BAJ34929.1| fasciclin-like arabinogalactan protein [Vitis hybrid cultivar]
          Length = 416

 Score =  243 bits (620), Expect = 1e-62
 Identities = 126/184 (68%), Positives = 146/184 (79%), Gaps = 3/184 (1%)
 Frame = -2

Query: 544 VVSNGALATLAGK-PLSVIKNALSLHVLLDYFDAKKLHGVPDGSTLSTTLYQTTGNAQNK 368
           V++N A++ LAGK PLSVIK AL L V+LDY+D KKLH + DG+TLSTTLYQTTGNA   
Sbjct: 59  VLNNAAMSALAGKHPLSVIKKALMLLVVLDYYDGKKLHEISDGTTLSTTLYQTTGNAPGN 118

Query: 367 IGFVNITDLKGGRVGFGSGIAGSKLDSSYTKEIKQVPYNFSVVEIST--XXXXXXXXXXX 194
           +GFVNITDLKGG+VGFGS   GSKLDSSYTK +KQ+PYN SV+EIS              
Sbjct: 119 LGFVNITDLKGGKVGFGSAAPGSKLDSSYTKSVKQIPYNISVLEISAPIIAPGLLTAPAP 178

Query: 193 PSSDLNITALLEKAGCKTFAGLLSSTGVLKTYQSAITKGLTVFAPNDEAFKAKGLPDLSK 14
            +SD+NIT LLEKAGCKTFA LL STGV+K Y+SA+ KGLTVFAPNDEAFKA G+PDL+K
Sbjct: 179 SASDVNITGLLEKAGCKTFASLLVSTGVIKIYESAVEKGLTVFAPNDEAFKADGVPDLTK 238

Query: 13  LTNA 2
           LTNA
Sbjct: 239 LTNA 242


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