BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029524
         (379 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39646.3| unnamed protein product [Vitis vinifera]              112   4e-23
ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|2...    93   3e-17
sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-con...    84   9e-15
ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [S...    83   2e-14
ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containin...    83   3e-14

>emb|CBI39646.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score =  112 bits (279), Expect = 4e-23
 Identities = 51/88 (57%), Positives = 63/88 (71%)
 Frame = -1

Query: 379 GSCPYGDACKYLHPKQNPQSISTFGIAVTNSMENTQSVNMIGSQVSEQSPLQGNVLRDGS 200
           G C YGD+CKY HPKQ+ Q+ +T  I VT   +N QS++  G+Q+    PL GNV++D  
Sbjct: 65  GFCQYGDSCKYFHPKQSLQNTNTQSIPVTGFPDNIQSLSNPGNQLVGGGPLPGNVVKDSM 124

Query: 199 GIWLGNLPPSLKPPPEGGYPSLPFVDWG 116
           G   GNLPPSLKPPPEGGYP LPF+DWG
Sbjct: 125 GNSWGNLPPSLKPPPEGGYPPLPFLDWG 152


>ref|XP_002318931.1| predicted protein [Populus trichocarpa] gi|222857307|gb|EEE94854.1|
           predicted protein [Populus trichocarpa]
          Length = 150

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 45/88 (51%), Positives = 54/88 (61%)
 Frame = -1

Query: 379 GSCPYGDACKYLHPKQNPQSISTFGIAVTNSMENTQSVNMIGSQVSEQSPLQGNVLRDGS 200
           G CPYGD+CKYLH        + F        +N QS  M G+Q++  S   G  +R+  
Sbjct: 70  GFCPYGDSCKYLHTNFATSQGTAF-------KDNVQSPTMPGNQLAGGSSFPGVAVRESM 122

Query: 199 GIWLGNLPPSLKPPPEGGYPSLPFVDWG 116
           G+  GNLPPSLKPPPEGGYP LPFVDWG
Sbjct: 123 GMSWGNLPPSLKPPPEGGYPPLPFVDWG 150


>sp|Q0JP11.2|C3H3_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 3;
           Short=OsC3H3 gi|215701065|dbj|BAG92489.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|218187901|gb|EEC70328.1| hypothetical protein
           OsI_01197 [Oryza sativa Indica Group]
           gi|222618113|gb|EEE54245.1| hypothetical protein
           OsJ_01120 [Oryza sativa Japonica Group]
          Length = 167

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 7/95 (7%)
 Frame = -1

Query: 379 GSCPYGDACKYLHPKQNPQSIS-------TFGIAVTNSMENTQSVNMIGSQVSEQSPLQG 221
           G+C +GD+C+Y HPK  P +         +  +A  ++++ +Q  N +G Q ++ S   G
Sbjct: 76  GTCKFGDSCRYFHPKPPPANPGPAPSGPVSGPMAQQSNIQGSQP-NFVGYQAADGSSFSG 134

Query: 220 NVLRDGSGIWLGNLPPSLKPPPEGGYPSLPFVDWG 116
           N+L  G   W GNLPPSL+PPPEGGYP  PFVDWG
Sbjct: 135 NIL-GGHTSW-GNLPPSLRPPPEGGYPPFPFVDWG 167


>ref|XP_002455379.1| hypothetical protein SORBIDRAFT_03g009590 [Sorghum bicolor]
           gi|241927354|gb|EES00499.1| hypothetical protein
           SORBIDRAFT_03g009590 [Sorghum bicolor]
          Length = 164

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 45/94 (47%), Positives = 55/94 (58%), Gaps = 6/94 (6%)
 Frame = -1

Query: 379 GSCPYGDACKYLHPKQ---NPQSI---STFGIAVTNSMENTQSVNMIGSQVSEQSPLQGN 218
           G+C YGD+C+Y HPK    NP      S  G  V  S       N +G Q  +++   GN
Sbjct: 73  GTCKYGDSCRYFHPKPDGVNPALAAPGSGPGPMVQQSDFIGNQPNFVGYQGPDRNSFSGN 132

Query: 217 VLRDGSGIWLGNLPPSLKPPPEGGYPSLPFVDWG 116
           +L  G   W GNLPPSL+PPPEGGYP LPF+DWG
Sbjct: 133 IL-GGHTAW-GNLPPSLQPPPEGGYPPLPFIDWG 164


>ref|XP_004135569.1| PREDICTED: zinc finger CCCH domain-containing protein 3-like
           [Cucumis sativus] gi|449508616|ref|XP_004163363.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           3-like [Cucumis sativus]
          Length = 156

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/90 (45%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
 Frame = -1

Query: 379 GSCPYGDACKYLHPKQN-PQSISTFGIAVTNSMENTQSVNM-IGSQVSEQSPLQGNVLRD 206
           G C YGD+CKY HP  N   + ++    +    EN Q  N+ +   V   S   G+++ D
Sbjct: 67  GFCQYGDSCKYFHPNNNNDNTYNSSSYPMAGFPENYQPPNVPVNRFVDGNSSSTGSLISD 126

Query: 205 GSGIWLGNLPPSLKPPPEGGYPSLPFVDWG 116
             G   GNLPPSL PPP+GGYP LPFVDWG
Sbjct: 127 RLGTSWGNLPPSLMPPPDGGYPPLPFVDWG 156