BLASTX nr result

ID: Bupleurum21_contig00029517 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029517
         (625 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249...   222   5e-56
ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207...   216   2e-54
ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|2...   216   4e-54
ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana] ...   210   2e-52
ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arab...   209   3e-52

>ref|XP_002265767.1| PREDICTED: uncharacterized protein LOC100249204 [Vitis vinifera]
           gi|296084165|emb|CBI24553.3| unnamed protein product
           [Vitis vinifera]
          Length = 172

 Score =  222 bits (565), Expect = 5e-56
 Identities = 110/162 (67%), Positives = 137/162 (84%), Gaps = 1/162 (0%)
 Frame = +2

Query: 65  LFCRHLNTRSVNGPSDILKRKISQIEKQRKKRSPA-NKLFVEVPESKSYLDTATLPIVLT 241
           +F R LNT S +GP+D LKRKI+ +EK RK+R P  ++ +VEVPES+ +LDTAT P+ + 
Sbjct: 10  VFQRQLNTLSHDGPTDTLKRKIAGMEKIRKRRDPKKDQFYVEVPESQKFLDTATWPMTIA 69

Query: 242 AVGGALFAKLLMMRDDSKSQEIIERKIKNAPAGQGTVRMLSREEWEDIKDVRPRTPFESK 421
           AVG A+ AKL MM DDSKS+E++ERKIKNAPAGQGTVRML+REEW+ I++VRPRTPFESK
Sbjct: 70  AVGVAVIAKLFMMYDDSKSEEMVERKIKNAPAGQGTVRMLTREEWDAIQEVRPRTPFESK 129

Query: 422 LARPKARIRTGEPLHMEDLKDWTIDVLTDAFTRVEENVRQRS 547
            +R  ARIRTGEPLHMED+KDWT+DVLTDA TRVEE+V++ S
Sbjct: 130 FSRHNARIRTGEPLHMEDVKDWTLDVLTDALTRVEESVKRGS 171


>ref|XP_004138022.1| PREDICTED: uncharacterized protein LOC101207324 [Cucumis sativus]
           gi|449519980|ref|XP_004167012.1| PREDICTED:
           uncharacterized protein LOC101228588 [Cucumis sativus]
          Length = 176

 Score =  216 bits (551), Expect = 2e-54
 Identities = 109/151 (72%), Positives = 132/151 (87%), Gaps = 2/151 (1%)
 Frame = +2

Query: 101 GPSDILKRKISQIEKQRK-KRSPANKLF-VEVPESKSYLDTATLPIVLTAVGGALFAKLL 274
           GPS++LK KI+++EK RK KRS     F V+VPES S+LDT ++P++LTAVG ALFAKLL
Sbjct: 23  GPSEVLKGKIAELEKFRKMKRSTKKDQFTVDVPESNSFLDTPSMPMILTAVGIALFAKLL 82

Query: 275 MMRDDSKSQEIIERKIKNAPAGQGTVRMLSREEWEDIKDVRPRTPFESKLARPKARIRTG 454
           MM D+S+S+E+IERKIKNAP GQGTVRMLSR+EWE+I++VRPRTPFESKLARP ARIRTG
Sbjct: 83  MMYDESRSEELIERKIKNAPPGQGTVRMLSRQEWEEIREVRPRTPFESKLARPNARIRTG 142

Query: 455 EPLHMEDLKDWTIDVLTDAFTRVEENVRQRS 547
           EPLHMEDLKDWT+DVL++A TR EE+VR  S
Sbjct: 143 EPLHMEDLKDWTVDVLSNALTRAEESVRHGS 173


>ref|XP_002333862.1| predicted protein [Populus trichocarpa] gi|222838735|gb|EEE77100.1|
           predicted protein [Populus trichocarpa]
          Length = 179

 Score =  216 bits (549), Expect = 4e-54
 Identities = 108/162 (66%), Positives = 136/162 (83%), Gaps = 4/162 (2%)
 Frame = +2

Query: 74  RHLNTR-SVNGPSDILKRKISQIEKQRKKRSPANK---LFVEVPESKSYLDTATLPIVLT 241
           RHL+T  S +G ++ LKR+++++EK R+ +  + K   +FV+VPES S+LDTAT+P++LT
Sbjct: 18  RHLHTTVSRDGATETLKRRVTELEKIRRSKKKSKKKDDIFVQVPESLSFLDTATMPMILT 77

Query: 242 AVGGALFAKLLMMRDDSKSQEIIERKIKNAPAGQGTVRMLSREEWEDIKDVRPRTPFESK 421
            VG ALFAKLLMM DDS SQE+IERKIKNAP GQGTVRML+REEWE+ ++VRPRTPFESK
Sbjct: 78  VVGTALFAKLLMMYDDSHSQEMIERKIKNAPVGQGTVRMLTREEWEEFREVRPRTPFESK 137

Query: 422 LARPKARIRTGEPLHMEDLKDWTIDVLTDAFTRVEENVRQRS 547
           LARP ARIRT EP+  +DLKDWTIDVLTDA TRVEE+V++ S
Sbjct: 138 LARPNARIRTEEPVRTDDLKDWTIDVLTDALTRVEESVKRNS 179


>ref|NP_565311.1| uncharacterized protein [Arabidopsis thaliana]
           gi|20197972|gb|AAD25844.2| expressed protein
           [Arabidopsis thaliana] gi|20198213|gb|AAM15465.1|
           expressed protein [Arabidopsis thaliana]
           gi|51971539|dbj|BAD44434.1| unknown protein [Arabidopsis
           thaliana] gi|51971797|dbj|BAD44563.1| unknown protein
           [Arabidopsis thaliana] gi|107738176|gb|ABF83655.1|
           At2g04340 [Arabidopsis thaliana]
           gi|330250727|gb|AEC05821.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 173

 Score =  210 bits (534), Expect = 2e-52
 Identities = 103/172 (59%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
 Frame = +2

Query: 35  MNTSRRNVIQLFCRHLNTRSVNGPSDILKRKISQIEKQRKKRSPA-NKLFVEVPESKSYL 211
           M + +  +  L  R  ++ S + P++ L++KI+ ++K +K+R+P  N+  VEVPES+SYL
Sbjct: 1   MMSRQSQLFTLLRRRFHSPSNDAPTETLRKKIADLQKSKKRRNPIKNQFLVEVPESRSYL 60

Query: 212 DTATLPIVLTAVGGALFAKLLMMRDDSKSQEIIERKIKNAPAGQGTVRMLSREEWEDIKD 391
           DTAT+P+ L  VG ALFAK+LMM DDSKSQE+IERKIKNAP GQGTVRM+ REEW++ ++
Sbjct: 61  DTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPQGQGTVRMIDREEWDEFRE 120

Query: 392 VRPRTPFESKLARPKARIRTGEPLHMEDLKDWTIDVLTDAFTRVEENVRQRS 547
           VRPRTPFESKLARP A+IRTGEP+  +DLK+WTIDVLT+A  R EE+VR+ S
Sbjct: 121 VRPRTPFESKLARPNAQIRTGEPVRKDDLKNWTIDVLTNALERTEESVRRGS 172


>ref|XP_002883635.1| hypothetical protein ARALYDRAFT_899238 [Arabidopsis lyrata subsp.
           lyrata] gi|297329475|gb|EFH59894.1| hypothetical protein
           ARALYDRAFT_899238 [Arabidopsis lyrata subsp. lyrata]
          Length = 173

 Score =  209 bits (532), Expect = 3e-52
 Identities = 102/172 (59%), Positives = 137/172 (79%), Gaps = 1/172 (0%)
 Frame = +2

Query: 35  MNTSRRNVIQLFCRHLNTRSVNGPSDILKRKISQIEKQRKKRSPA-NKLFVEVPESKSYL 211
           M + +  +  L  R  ++ S + P++ L++KI+ ++K +K+R+P  N+  VEVPES+SYL
Sbjct: 1   MMSRQSQLFTLLKRRFHSPSSDAPTETLRKKIADLQKSKKRRNPIKNQFLVEVPESRSYL 60

Query: 212 DTATLPIVLTAVGGALFAKLLMMRDDSKSQEIIERKIKNAPAGQGTVRMLSREEWEDIKD 391
           DTAT+P+ L  VG ALFAK+LMM DDSKSQE+IERKIKNAP GQGTVR++ REEW++ ++
Sbjct: 61  DTATMPMFLAVVGIALFAKVLMMIDDSKSQEMIERKIKNAPPGQGTVRIIEREEWDEFRE 120

Query: 392 VRPRTPFESKLARPKARIRTGEPLHMEDLKDWTIDVLTDAFTRVEENVRQRS 547
           VRPRTPFESKLARP A+IRTGEP+  +DL +WTIDVLT+A  R EE+VR+RS
Sbjct: 121 VRPRTPFESKLARPNAQIRTGEPVRKDDLTNWTIDVLTNALERTEESVRRRS 172


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