BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029501
         (901 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524459.1| conserved hypothetical protein [Ricinus comm...   236   5e-60
ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containin...   233   6e-59
ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|2...   227   3e-57
ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containin...   226   7e-57
ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|2...   214   2e-53

>ref|XP_002524459.1| conserved hypothetical protein [Ricinus communis]
           gi|223536247|gb|EEF37899.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 341

 Score =  236 bits (602), Expect = 5e-60
 Identities = 122/275 (44%), Positives = 174/275 (63%), Gaps = 28/275 (10%)
 Frame = +3

Query: 75  SQSLNPRTGQPNQIGL-KGASRVFYKTRMCAKFRSGTCRDGESCTYAHGVEDIHKPPPNW 251
           +QS+N R   PN + + KG + +F+KTRMCAKF++G+CR+GE+C +AHG++D+ +PPPNW
Sbjct: 59  NQSMNYRMPPPNNLPINKGTTNIFFKTRMCAKFKTGSCRNGENCNFAHGMQDMRQPPPNW 118

Query: 252 QEIF-----REKNRKVRNWDDDQRMIYRMKICRIFYNGGECPFGDTCRFRHQSPSRFETD 416
           QE+       E++R   NWDDDQR+I++MK+C+ FYNG +CP+GD C F H+ PS+F  D
Sbjct: 119 QELVGVVVRGEEDRPAGNWDDDQRIIHKMKLCKKFYNGEQCPYGDRCNFLHEDPSKFRDD 178

Query: 417 ITRPSFGDNTAISIDNVC-PVMEQISNTRQAEHDRPV-----DAIRVNMKP--WRTKICA 572
             R  F +++AISI     P+M         E ++PV     DA R NMKP  W+TK+C 
Sbjct: 179 AGR--FRESSAISIGTTAPPMMHGSGGLSVVEVNKPVNNAGADAYRGNMKPVYWKTKLCT 236

Query: 573 KWE-TGQCPFGERCQYAHGESELQVHGAHIKAKIESGVRSISTK---AFTQPGNDALHTQ 740
           KWE TGQCPFGE+C +AHG++ELQ+     + ++     SI TK        G+ ++   
Sbjct: 237 KWETTGQCPFGEKCHFAHGQAELQIPNGRAEGEV-GNAGSILTKPPPILVTNGSPSMTAS 295

Query: 741 A----------EANIPWKPPYKKINRIYGDWLEDL 815
                      +  + WK  +KKINRIYGDWL+DL
Sbjct: 296 VPSLVEERQGKKCFLKWK-GFKKINRIYGDWLDDL 329


>ref|XP_002281877.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Vitis vinifera]
          Length = 349

 Score =  233 bits (593), Expect = 6e-59
 Identities = 124/299 (41%), Positives = 173/299 (57%), Gaps = 32/299 (10%)
 Frame = +3

Query: 15  KTSQSQGNYPLDLSPTESAPSQSLNPRTGQPNQIGLKGASRVFYKTRMCAKFRSGTCRDG 194
           +T  S+G  P       S+P  S+NPR   PN    +G S +F+KTR+CAKF+ G CR+G
Sbjct: 50  RTRNSEGQMP------NSSPHPSMNPRIHPPNAPTSRGTSNIFFKTRICAKFKLGQCRNG 103

Query: 195 ESCTYAHGVEDIHKPPPNWQEIF----REKNRKVRNWDDDQRMIYRMKICRIFYNGGECP 362
           E+C +AHG+ED+ +PPPNWQE+     RE+ R  + WD+DQR+I++MK+C+ FYNG ECP
Sbjct: 104 ENCNFAHGMEDMRQPPPNWQELVNVGGREEERGTKIWDEDQRIIHKMKLCKKFYNGEECP 163

Query: 363 FGDTCRFRHQSPSRFETDITRPSFGDNTAISIDNVCPVMEQISNTRQAEH--------DR 518
           +GD C F H+ P +F  D  RP   ++ AISI    P ME  S +    +        + 
Sbjct: 164 YGDRCNFLHEDPKKFRDDSARPR--ESFAISIGTTGPPMEHGSGSNLGSNLSSNLSSMNS 221

Query: 519 PVDAIRVNMKP--WRTKICAKWE-TGQCPFGERCQYAHGESELQVHGAHIK----AKIES 677
            +D  R N+KP  W+TK+C KWE TG CPFGE+C +AHG++ELQ+ G        A+ E 
Sbjct: 222 GLDPFRGNVKPTYWKTKLCCKWETTGHCPFGEKCHFAHGQAELQMTGGGGGGGGWAEAEV 281

Query: 678 G-VRSISTKAFTQPGNDALHTQAEANIPWKPP------------YKKINRIYGDWLEDL 815
           G   S+  K  + P N +   +     P  P             +KKINRIY DW++DL
Sbjct: 282 GNTCSLPAKLPSVPANVSTPPELGTGAPINPERQNKKLLLQSKGFKKINRIYADWIDDL 340


>ref|XP_002313732.1| predicted protein [Populus trichocarpa] gi|222850140|gb|EEE87687.1|
           predicted protein [Populus trichocarpa]
          Length = 341

 Score =  227 bits (578), Expect = 3e-57
 Identities = 125/284 (44%), Positives = 174/284 (61%), Gaps = 32/284 (11%)
 Frame = +3

Query: 60  TESAPSQSLNPRTGQPNQIGL-KGASRVFYKTRMCAKFRSGTCRDGESCTYAHGVEDIHK 236
           +E  P+QS+N RT   N + + KGA+ +F+KTR+CAKF++GTCR+GE+C +AHG++D+ +
Sbjct: 51  SEDNPNQSVNSRTPPTNNLPVHKGATNIFFKTRVCAKFKTGTCRNGENCNFAHGMQDLRQ 110

Query: 237 PPPNWQEIF------REKNRKVRNWDDDQRMIYRMKICRIFYNGGECPFGDTCRFRHQSP 398
           PPPNW+E+        E      NW+DDQR+I++MK+C+ FYNG ECP+GD C F H+ P
Sbjct: 111 PPPNWKELVGVSVSSEEDRSTATNWEDDQRIIHKMKLCKKFYNGEECPYGDRCNFLHEDP 170

Query: 399 SRFETDITRPSFGDNTAISIDNVCPVMEQISNT-RQAEHDRPV-----DAIRVN-MKP-- 551
           S+F  D  R  F +++AISI      +   S     AE +RP      DA R N +KP  
Sbjct: 171 SKFREDTGR--FRESSAISIGTTGQALGHGSGVFNAAEVNRPANNAVSDASRSNIIKPVY 228

Query: 552 WRTKICAKWE-TGQCPFGERCQYAHGESELQVHGAHIKAKIESG-VRSISTKAFTQPGND 725
           W+TK+C KWE TGQCPFGE+C +AHG +ELQ  G   + ++E+G   S+ TKA      +
Sbjct: 229 WKTKLCTKWEITGQCPFGEKCHFAHGLAELQAPGG--RTEVEAGNAGSVLTKAPPPLLPN 286

Query: 726 ALHTQAEANIP--------------WKPPYKKINRIYGDWLEDL 815
            +      N+P              WK   KKINRIY DWL+DL
Sbjct: 287 NVSPSMTVNVPSLIEEEQGKKCLLKWK-GQKKINRIYADWLDDL 329


>ref|XP_004139420.1| PREDICTED: zinc finger CCCH domain-containing protein 39-like
           [Cucumis sativus] gi|449520655|ref|XP_004167349.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           39-like [Cucumis sativus]
          Length = 347

 Score =  226 bits (575), Expect = 7e-57
 Identities = 123/274 (44%), Positives = 168/274 (61%), Gaps = 24/274 (8%)
 Frame = +3

Query: 66  SAPSQSLNPRTGQPNQIGLKGASRVFYKTRMCAKFRSGTCRDGESCTYAHGVEDIHKPPP 245
           S  + SLN R   PN    KG S +F+KTRMCAKF+ G CR+G SC +AHGVED+ +PPP
Sbjct: 65  SYSNPSLNSRGQPPNAPVNKGISNIFFKTRMCAKFKLGLCRNGASCNFAHGVEDMRQPPP 124

Query: 246 NWQEI--FREKNRKVRNWDDDQRMIYRMKICRIFYNGGECPFGDTCRFRHQSPSRFETDI 419
           NWQEI   +E ++ V NW+DDQ++I +MK+CR FYNG ECP+GD C F H+ P++F  D 
Sbjct: 125 NWQEIVGIKEDDQSVNNWNDDQKIIQKMKLCRKFYNGEECPYGDRCNFLHEDPAKFRDDS 184

Query: 420 TRPSFGDNTAISIDNV-CPVMEQISNTRQAEHDRPV-----DAIRV--NMKP--WRTKIC 569
            R  F +++AISI     P+M    ++   E  R       DA+R   N++P  W+TK+C
Sbjct: 185 GR--FRESSAISIGTTGTPLMNGNDSSSYIEPSRVTSCSVSDALRANGNVRPSFWKTKLC 242

Query: 570 AKWE-TGQCPFGERCQYAHGESELQVH----------GAHIKAKIESGVRSISTKAFTQP 716
            KWE TG CPFG++C +AHG+SELQ++            ++K  I +   S S      P
Sbjct: 243 TKWEITGHCPFGDKCHFAHGQSELQLYIGREGEVSTAALNVKPLIVAMEASSSLTTNVVP 302

Query: 717 GNDALHTQAEAN-IPWKPPYKKINRIYGDWLEDL 815
            +     Q + + + WK P KKINRIY DWL+DL
Sbjct: 303 SSALPEGQEKPSLLKWKGP-KKINRIYADWLDDL 335


>ref|XP_002305494.1| predicted protein [Populus trichocarpa] gi|222848458|gb|EEE86005.1|
           predicted protein [Populus trichocarpa]
          Length = 313

 Score =  214 bits (546), Expect = 2e-53
 Identities = 125/302 (41%), Positives = 179/302 (59%), Gaps = 33/302 (10%)
 Frame = +3

Query: 9   NTKTSQSQGNYPLDLSP--TESAPSQSLNPRTGQPNQIGL-KGASRVFYKTRMCAKFRSG 179
           N +  Q Q + P    P  +E   +QS++ R    N + + KG + +F+KTR+CAKF++G
Sbjct: 5   NEQFEQQQQHQPPYKRPRNSEDNSNQSMSSRVPPTNSLPVHKGTTNIFFKTRVCAKFKTG 64

Query: 180 TCRDGESCTYAHGVEDIHKPPPNWQEIF------REKNRKVRNWDDDQRMIYRMKICRIF 341
           TCR+GE+C +AHG++D+ +PPPNW+E+        +      N +DD R+I++MK+C+ F
Sbjct: 65  TCRNGENCNFAHGMQDLRQPPPNWKELVSVGVSSEDDRSTATNREDDLRIIHKMKLCKKF 124

Query: 342 YNGGECPFGDTCRFRHQSPSRFETDITRPSFGDNTAISIDNVCPVMEQISNT-RQAEHDR 518
           YNG ECP+GD C F H+ P+ F  D  R  F +++AISI     +M Q S     AE +R
Sbjct: 125 YNGEECPYGDRCNFLHEDPANFREDTGR--FRESSAISIGTTDHLMGQGSGIFNAAEVNR 182

Query: 519 PV-----DAIRVNM-KP--WRTKICAKWE-TGQCPFGERCQYAHGESELQVHGAHIKAKI 671
           P      DA R N+ KP  W+TK+C KWE TGQCPFGE+C +AHG +ELQV G  ++ ++
Sbjct: 183 PANNAVSDAPRSNLIKPVYWKTKLCTKWEMTGQCPFGEKCHFAHGLAELQVPG--VRTEV 240

Query: 672 ESG-VRSISTKAFTQPGNDALHTQAEANIP-------------WKPPYKKINRIYGDWLE 809
           ++G   S  TKA T    + +      N+P             WK   KKINRIY DWL+
Sbjct: 241 DAGNAGSNVTKAPTPVLPNNMSPSMTVNVPSLVEEKGTKCLLKWK-GQKKINRIYADWLD 299

Query: 810 DL 815
           DL
Sbjct: 300 DL 301