BLASTX nr result

ID: Bupleurum21_contig00029438 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029438
         (413 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263...    60   2e-07
emb|CBI22944.3| unnamed protein product [Vitis vinifera]               60   2e-07
emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]    60   2e-07
ref|XP_002314351.1| predicted protein [Populus trichocarpa] gi|2...    59   5e-07
gb|ABK94656.1| unknown [Populus trichocarpa]                           59   5e-07

>ref|XP_002273693.2| PREDICTED: uncharacterized protein LOC100263762 [Vitis vinifera]
          Length = 292

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +2

Query: 8   PVPPQHIN--YNRPEPPQ-VLNYS-IPEPPKYMHYNXXXXXXXXXXXXXXXXXXXXXTYY 175
           P PP ++   YN  +PP  +  Y  I  PP++ HY                         
Sbjct: 223 PPPPVYVTHRYNTYKPPPYITEYEYIRSPPRHAHY------------------------- 257

Query: 176 SGLEQYNGDYRNDNHGNGNGNITSVFSDENPNACKIV 286
           S +++Y+ DYRN N  N NGNITS+FSDENPNAC+IV
Sbjct: 258 SRMDRYSEDYRNVN--NSNGNITSMFSDENPNACRIV 292


>emb|CBI22944.3| unnamed protein product [Vitis vinifera]
          Length = 276

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +2

Query: 8   PVPPQHIN--YNRPEPPQ-VLNYS-IPEPPKYMHYNXXXXXXXXXXXXXXXXXXXXXTYY 175
           P PP ++   YN  +PP  +  Y  I  PP++ HY                         
Sbjct: 207 PPPPVYVTHRYNTYKPPPYITEYEYIRSPPRHAHY------------------------- 241

Query: 176 SGLEQYNGDYRNDNHGNGNGNITSVFSDENPNACKIV 286
           S +++Y+ DYRN N  N NGNITS+FSDENPNAC+IV
Sbjct: 242 SRMDRYSEDYRNVN--NSNGNITSMFSDENPNACRIV 276


>emb|CAN79553.1| hypothetical protein VITISV_025727 [Vitis vinifera]
          Length = 288

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 38/97 (39%), Positives = 50/97 (51%), Gaps = 4/97 (4%)
 Frame = +2

Query: 8   PVPPQHIN--YNRPEPPQ-VLNYS-IPEPPKYMHYNXXXXXXXXXXXXXXXXXXXXXTYY 175
           P PP ++   YN  +PP  +  Y  I  PP++ HY                         
Sbjct: 219 PPPPVYVTHRYNTYKPPPYITEYEYIRSPPRHAHY------------------------- 253

Query: 176 SGLEQYNGDYRNDNHGNGNGNITSVFSDENPNACKIV 286
           S +++Y+ DYRN N  N NGNITS+FSDENPNAC+IV
Sbjct: 254 SRMDRYSEDYRNVN--NSNGNITSMFSDENPNACRIV 288


>ref|XP_002314351.1| predicted protein [Populus trichocarpa] gi|222863391|gb|EEF00522.1|
           predicted protein [Populus trichocarpa]
          Length = 259

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = +2

Query: 29  NYNRPEPPQVLNYSIPEPPKYMH-YNXXXXXXXXXXXXXXXXXXXXXTYYSGLEQYNGDY 205
           N+NR    Q +  + P+P    H YN                     T YS ++ YN DY
Sbjct: 174 NWNRHPISQGVPQAAPKPIYVTHSYNTYRPSPNVTEYEYLRPPPPHHTIYSRMDHYNEDY 233

Query: 206 RNDNHGNGNGNITSVFSDENPNACKIV 286
            +DN  + NGNITS+FSDENPNAC+I+
Sbjct: 234 -HDNSRSNNGNITSMFSDENPNACRIM 259


>gb|ABK94656.1| unknown [Populus trichocarpa]
          Length = 259

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 34/87 (39%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
 Frame = +2

Query: 29  NYNRPEPPQVLNYSIPEPPKYMH-YNXXXXXXXXXXXXXXXXXXXXXTYYSGLEQYNGDY 205
           N+NR    Q +  + P+P    H YN                     T YS ++ YN DY
Sbjct: 174 NWNRHPISQGVPQAAPKPIYVTHSYNTYRPSPNVTEYEYLRPPPPHHTIYSRMDHYNEDY 233

Query: 206 RNDNHGNGNGNITSVFSDENPNACKIV 286
            +DN  + NGNITS+FSDENPNAC+I+
Sbjct: 234 -HDNSRSNNGNITSMFSDENPNACRIM 259


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