BLASTX nr result

ID: Bupleurum21_contig00029430 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029430
         (541 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 h...   324   5e-87
emb|CBI34238.3| unnamed protein product [Vitis vinifera]              324   5e-87
ref|XP_002271491.1| PREDICTED: WD repeat-containing protein 48 h...   324   5e-87
ref|XP_002512270.1| nucleotide binding protein, putative [Ricinu...   319   2e-85
ref|XP_004156446.1| PREDICTED: WD repeat-containing protein 48-l...   312   2e-83

>ref|XP_003633666.1| PREDICTED: WD repeat-containing protein 48 homolog isoform 2 [Vitis
           vinifera]
          Length = 733

 Score =  324 bits (831), Expect = 5e-87
 Identities = 154/180 (85%), Positives = 168/180 (93%)
 Frame = +1

Query: 1   SCTRTLRQHSDYVTCLAAAERNENIVASGGLGGEVFIWDIEAALSPVTKSSDTTEDDCSN 180
           +CTRTLRQHSDYVTCLAAAE+N N+VASGGLGGEVF+WD+EAAL+PV+KSSD  E+DCSN
Sbjct: 117 TCTRTLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSN 176

Query: 181 GINGTGNSQPITSLRTIGSSNSISLHTTQSQGYVPITAKGHKESVYALAMNDTGSLLVSG 360
           GING+GNS PITSLRTI SSNSISLH T   GYVP+ AKGHKESVYALAMND+G+LLVSG
Sbjct: 177 GINGSGNSLPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKESVYALAMNDSGTLLVSG 236

Query: 361 GTEKVVRVWDPRDGSKTMKLKGHTDNIRALLLDSTGRLCLSGSSDSMIRLWDLGQQRCVH 540
           GTEKVVR+WDPR GSKTMKL+GHTDNIRALLLDSTGR CLSGSSDSMIRLWDLGQQRCVH
Sbjct: 237 GTEKVVRIWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVH 296


>emb|CBI34238.3| unnamed protein product [Vitis vinifera]
          Length = 781

 Score =  324 bits (831), Expect = 5e-87
 Identities = 154/180 (85%), Positives = 168/180 (93%)
 Frame = +1

Query: 1   SCTRTLRQHSDYVTCLAAAERNENIVASGGLGGEVFIWDIEAALSPVTKSSDTTEDDCSN 180
           +CTRTLRQHSDYVTCLAAAE+N N+VASGGLGGEVF+WD+EAAL+PV+KSSD  E+DCSN
Sbjct: 117 TCTRTLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSN 176

Query: 181 GINGTGNSQPITSLRTIGSSNSISLHTTQSQGYVPITAKGHKESVYALAMNDTGSLLVSG 360
           GING+GNS PITSLRTI SSNSISLH T   GYVP+ AKGHKESVYALAMND+G+LLVSG
Sbjct: 177 GINGSGNSLPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKESVYALAMNDSGTLLVSG 236

Query: 361 GTEKVVRVWDPRDGSKTMKLKGHTDNIRALLLDSTGRLCLSGSSDSMIRLWDLGQQRCVH 540
           GTEKVVR+WDPR GSKTMKL+GHTDNIRALLLDSTGR CLSGSSDSMIRLWDLGQQRCVH
Sbjct: 237 GTEKVVRIWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVH 296


>ref|XP_002271491.1| PREDICTED: WD repeat-containing protein 48 homolog isoform 1 [Vitis
           vinifera]
          Length = 765

 Score =  324 bits (831), Expect = 5e-87
 Identities = 154/180 (85%), Positives = 168/180 (93%)
 Frame = +1

Query: 1   SCTRTLRQHSDYVTCLAAAERNENIVASGGLGGEVFIWDIEAALSPVTKSSDTTEDDCSN 180
           +CTRTLRQHSDYVTCLAAAE+N N+VASGGLGGEVF+WD+EAAL+PV+KSSD  E+DCSN
Sbjct: 117 TCTRTLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFVWDLEAALTPVSKSSDAMEEDCSN 176

Query: 181 GINGTGNSQPITSLRTIGSSNSISLHTTQSQGYVPITAKGHKESVYALAMNDTGSLLVSG 360
           GING+GNS PITSLRTI SSNSISLH T   GYVP+ AKGHKESVYALAMND+G+LLVSG
Sbjct: 177 GINGSGNSLPITSLRTISSSNSISLHPTPPHGYVPVAAKGHKESVYALAMNDSGTLLVSG 236

Query: 361 GTEKVVRVWDPRDGSKTMKLKGHTDNIRALLLDSTGRLCLSGSSDSMIRLWDLGQQRCVH 540
           GTEKVVR+WDPR GSKTMKL+GHTDNIRALLLDSTGR CLSGSSDSMIRLWDLGQQRCVH
Sbjct: 237 GTEKVVRIWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVH 296


>ref|XP_002512270.1| nucleotide binding protein, putative [Ricinus communis]
           gi|223548231|gb|EEF49722.1| nucleotide binding protein,
           putative [Ricinus communis]
          Length = 764

 Score =  319 bits (817), Expect = 2e-85
 Identities = 151/180 (83%), Positives = 168/180 (93%)
 Frame = +1

Query: 1   SCTRTLRQHSDYVTCLAAAERNENIVASGGLGGEVFIWDIEAALSPVTKSSDTTEDDCSN 180
           +CT+TLRQHSDYVTCLAAAE+N NIVASGGLGGEVFIWD+EAAL+PV+KS+D  EDDCSN
Sbjct: 117 TCTKTLRQHSDYVTCLAAAEKNSNIVASGGLGGEVFIWDLEAALAPVSKSNDPMEDDCSN 176

Query: 181 GINGTGNSQPITSLRTIGSSNSISLHTTQSQGYVPITAKGHKESVYALAMNDTGSLLVSG 360
           G+NG+ NS P+TSLRTI SSNSIS+H +QS G+VPI AKGHKESVYALAMND+GS+LVSG
Sbjct: 177 GVNGSSNSLPMTSLRTISSSNSISMHNSQSHGFVPIAAKGHKESVYALAMNDSGSILVSG 236

Query: 361 GTEKVVRVWDPRDGSKTMKLKGHTDNIRALLLDSTGRLCLSGSSDSMIRLWDLGQQRCVH 540
           GTEKVVRVWDPR GSK MKL+GHTDNIRALLLDSTGR CLSGSSDSMIRLWDLGQQRC+H
Sbjct: 237 GTEKVVRVWDPRTGSKAMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCMH 296


>ref|XP_004156446.1| PREDICTED: WD repeat-containing protein 48-like [Cucumis sativus]
          Length = 757

 Score =  312 bits (800), Expect = 2e-83
 Identities = 149/179 (83%), Positives = 163/179 (91%)
 Frame = +1

Query: 4   CTRTLRQHSDYVTCLAAAERNENIVASGGLGGEVFIWDIEAALSPVTKSSDTTEDDCSNG 183
           CT+TLRQHSDYVTCLAAAE+N N+VASGGLGGEVFIWD+EAA +P  KS+D T+D+CSNG
Sbjct: 117 CTKTLRQHSDYVTCLAAAEKNSNVVASGGLGGEVFIWDLEAAYAPSAKSNDATDDECSNG 176

Query: 184 INGTGNSQPITSLRTIGSSNSISLHTTQSQGYVPITAKGHKESVYALAMNDTGSLLVSGG 363
           I  +GNS P+TSLRTI SSN+IS H  QS GYVPI AKGHKESVYALAMND+G+LLVSGG
Sbjct: 177 IIASGNSLPVTSLRTISSSNNISTHPNQSHGYVPIAAKGHKESVYALAMNDSGTLLVSGG 236

Query: 364 TEKVVRVWDPRDGSKTMKLKGHTDNIRALLLDSTGRLCLSGSSDSMIRLWDLGQQRCVH 540
           TEKVVRVWDPR GSKTMKL+GHTDNIRALLLDSTGR CLSGSSDSMIRLWDLGQQRCVH
Sbjct: 237 TEKVVRVWDPRTGSKTMKLRGHTDNIRALLLDSTGRFCLSGSSDSMIRLWDLGQQRCVH 295


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