BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029409
         (263 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsi...   106   2e-21
dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]      106   2e-21
emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana] gi|...   105   5e-21
gb|AAR01944.1| ribosomal protein S19 [Cycas revoluta] gi|3080724...   103   1e-20
gb|ACD46916.1| ribosomal protein S19 [Ginkgo biloba]                  102   3e-20

>ref|NP_568681.1| small subunit ribosomal protein S19 [Arabidopsis thaliana]
           gi|21542438|sp|P39697.2|RT19_ARATH RecName: Full=40S
           ribosomal protein S19, mitochondrial; Flags: Precursor
           gi|15028321|gb|AAK76637.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|20259155|gb|AAM14293.1| putative 40S ribosomal
           protein S19 [Arabidopsis thaliana]
           gi|332008115|gb|AED95498.1| small subunit ribosomal
           protein S19 [Arabidopsis thaliana]
          Length = 212

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = +2

Query: 17  SSNDVMTEIKKKDSNIRGQRSVWKEPFIDAFLQKMNMKGEKLANRKIWSRRSTILPEFVD 196
           S ++ + E +KK++ +   RSVWK+PF+DAFL K   K     NRKIWSRRSTILPE+VD
Sbjct: 116 SLDESIEEAEKKENKMMS-RSVWKDPFVDAFLMK---KKNAALNRKIWSRRSTILPEYVD 171

Query: 197 SFVRIYNGKTHVRCKITEGKVG 262
           S VRIYNGKTHVRCKITEGKVG
Sbjct: 172 SAVRIYNGKTHVRCKITEGKVG 193


>dbj|BAA97166.1| 40S ribosomal protein S19 [Arabidopsis thaliana]
          Length = 244

 Score =  106 bits (264), Expect = 2e-21
 Identities = 54/82 (65%), Positives = 64/82 (78%)
 Frame = +2

Query: 17  SSNDVMTEIKKKDSNIRGQRSVWKEPFIDAFLQKMNMKGEKLANRKIWSRRSTILPEFVD 196
           S ++ + E +KK++ +   RSVWK+PF+DAFL K   K     NRKIWSRRSTILPE+VD
Sbjct: 148 SLDESIEEAEKKENKMMS-RSVWKDPFVDAFLMK---KKNAALNRKIWSRRSTILPEYVD 203

Query: 197 SFVRIYNGKTHVRCKITEGKVG 262
           S VRIYNGKTHVRCKITEGKVG
Sbjct: 204 SAVRIYNGKTHVRCKITEGKVG 225


>emb|CAA54951.1| ribosomal protein S19 [Arabidopsis thaliana]
           gi|459422|emb|CAA54965.1| mitochondrial ribosomal
           protein S19, nuclear encoded [Arabidopsis thaliana]
          Length = 212

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/75 (70%), Positives = 60/75 (80%)
 Frame = +2

Query: 38  EIKKKDSNIRGQRSVWKEPFIDAFLQKMNMKGEKLANRKIWSRRSTILPEFVDSFVRIYN 217
           E +KK++ +   RSVWK+PF+DAFL K   K     NRKIWSRRSTILPE+VDS VRIYN
Sbjct: 123 EAEKKENKMMS-RSVWKDPFVDAFLMK---KKNAALNRKIWSRRSTILPEYVDSAVRIYN 178

Query: 218 GKTHVRCKITEGKVG 262
           GKTHVRCKITEGKVG
Sbjct: 179 GKTHVRCKITEGKVG 193


>gb|AAR01944.1| ribosomal protein S19 [Cycas revoluta] gi|308072485|dbj|BAJ22104.1|
           ribosomal protein S19 [Cycas taitungensis]
          Length = 93

 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/64 (75%), Positives = 55/64 (85%)
 Frame = +2

Query: 71  QRSVWKEPFIDAFLQKMNMKGEKLANRKIWSRRSTILPEFVDSFVRIYNGKTHVRCKITE 250
           +RS+WK  F+DAFL KM  K E +++RKIWSRRS+ILPEFVD FVRIYNGKT VRCKITE
Sbjct: 3   RRSIWKGSFVDAFLLKMRSKRENISSRKIWSRRSSILPEFVDCFVRIYNGKTFVRCKITE 62

Query: 251 GKVG 262
           GKVG
Sbjct: 63  GKVG 66


>gb|ACD46916.1| ribosomal protein S19 [Ginkgo biloba]
          Length = 93

 Score =  102 bits (254), Expect = 3e-20
 Identities = 47/64 (73%), Positives = 55/64 (85%)
 Frame = +2

Query: 71  QRSVWKEPFIDAFLQKMNMKGEKLANRKIWSRRSTILPEFVDSFVRIYNGKTHVRCKITE 250
           +RS+WK  F+DAFL KM  K E L++RKIWSRRS++LPEFVD FV+IYNGKT VRCKITE
Sbjct: 3   RRSIWKGSFVDAFLLKMRNKRENLSSRKIWSRRSSVLPEFVDRFVQIYNGKTFVRCKITE 62

Query: 251 GKVG 262
           GKVG
Sbjct: 63  GKVG 66