BLASTX nr result

ID: Bupleurum21_contig00029392 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029392
         (699 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]   133   3e-54
emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera]   133   3e-54
emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]   126   1e-51
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  113   5e-49
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   113   5e-49

>emb|CAN71532.1| hypothetical protein VITISV_018180 [Vitis vinifera]
          Length = 1323

 Score =  133 bits (335), Expect(2) = 3e-54
 Identities = 58/85 (68%), Positives = 74/85 (87%)
 Frame = -3

Query: 694  HGVPQSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLVNLLRCLA 515
            HG+PQSI S+RD KFM +FW+TLW K+GT+L+FS+++HP+TDGQTEVVNRSL NLLRC+ 
Sbjct: 996  HGLPQSIVSNRDVKFMSYFWKTLWVKLGTQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIV 1055

Query: 514  RDKPKQWDLVLPFAEFAYNNSKNRT 440
            RD+ + WD VLP AEFA+N+S NRT
Sbjct: 1056 RDQLRNWDNVLPQAEFAFNSSTNRT 1080



 Score =  104 bits (260), Expect(2) = 3e-54
 Identities = 53/137 (38%), Positives = 77/137 (56%)
 Frame = -2

Query: 434  PFEVVCGQNPSTALDLAPIPNMKKADIKAEEMVEHIREIHQQVKEQTEANNIRYKAATDL 255
            PFEV  G  P   +DL P+P   +     +    HIR+IH++V+E+ + +N  YK A D 
Sbjct: 1085 PFEVAYGLKPKQPVDLIPLPTSVRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAXDA 1144

Query: 254  HCRKFFFKEGDYVWAVLTKDRFLPRENHKMHDRKVRPCIILKRINDNAYKLKLPLHIKSS 75
            H R   F+EG  V   L  +RF P    K+  +K  P  +LKR+ +NAY L+LP ++  S
Sbjct: 1145 HRRYIQFQEGGLVMVRLRPERFHPSTYQKLQAKKAGPFRVLKRLGENAYLLELPSNLXFS 1204

Query: 74   DVFNVKHLLPYKGNVSD 24
             +FNVK L  Y G+ +D
Sbjct: 1205 PIFNVKDLYIYHGHHND 1221


>emb|CAN79339.1| hypothetical protein VITISV_044312 [Vitis vinifera]
          Length = 354

 Score =  133 bits (335), Expect(2) = 3e-54
 Identities = 58/85 (68%), Positives = 73/85 (85%)
 Frame = -3

Query: 694 HGVPQSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLVNLLRCLA 515
           HG+PQSI SDRD KFM +FW+TLW K+GT+L+FS+++HP+TDGQ EVVNRSL NLLRC+ 
Sbjct: 28  HGLPQSIVSDRDVKFMSYFWKTLWAKLGTQLKFSSSFHPQTDGQIEVVNRSLGNLLRCIV 87

Query: 514 RDKPKQWDLVLPFAEFAYNNSKNRT 440
           RD+ + WD VLP AEFA+N+S NRT
Sbjct: 88  RDQLRNWDNVLPQAEFAFNSSTNRT 112



 Score =  104 bits (260), Expect(2) = 3e-54
 Identities = 53/138 (38%), Positives = 77/138 (55%)
 Frame = -2

Query: 437 SPFEVVCGQNPSTALDLAPIPNMKKADIKAEEMVEHIREIHQQVKEQTEANNIRYKAATD 258
           SPFEV  G  P   +DL P+P         +    HI++IH+ V+E+ + +N  YK A D
Sbjct: 116 SPFEVAYGLKPKQLVDLIPLPTSVHTSQDGDAFTRHIQDIHENVREKIKISNENYKEAAD 175

Query: 257 LHCRKFFFKEGDYVWAVLTKDRFLPRENHKMHDRKVRPCIILKRINDNAYKLKLPLHIKS 78
            H R   F+EGD V   L  +RF P    K+  +K  P  +LKR+ +NAY L+LP ++  
Sbjct: 176 AHRRYIQFQEGDLVMVRLRPERFHPSTYQKLQAKKAGPFQVLKRLGENAYLLELPSNLHF 235

Query: 77  SDVFNVKHLLPYKGNVSD 24
           S +FNV+ L  Y G+ +D
Sbjct: 236 SPIFNVEDLYIYHGHHND 253


>emb|CAN79389.1| hypothetical protein VITISV_004909 [Vitis vinifera]
          Length = 895

 Score =  126 bits (316), Expect(2) = 1e-51
 Identities = 55/85 (64%), Positives = 70/85 (82%)
 Frame = -3

Query: 694 HGVPQSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLVNLLRCLA 515
           HG+PQSI   RD  FM +FW+TLW K+G +L+FS+++HP+TDGQTEVVNRSL NLLRC+ 
Sbjct: 569 HGLPQSIVFYRDVNFMSYFWKTLWAKLGAQLKFSSSFHPQTDGQTEVVNRSLGNLLRCIV 628

Query: 514 RDKPKQWDLVLPFAEFAYNNSKNRT 440
           RD+ + WD VLP AEFA+N+S NRT
Sbjct: 629 RDQLRNWDNVLPQAEFAFNSSTNRT 653



 Score =  103 bits (257), Expect(2) = 1e-51
 Identities = 53/138 (38%), Positives = 78/138 (56%)
 Frame = -2

Query: 437  SPFEVVCGQNPSTALDLAPIPNMKKADIKAEEMVEHIREIHQQVKEQTEANNIRYKAATD 258
            SPFEV  G  P   +DL P+    +     +    HIR+IH++V+E+ + +N  YK A D
Sbjct: 657  SPFEVAYGLKPKQPIDLIPLSTSVRTSQDGDAFARHIRDIHEKVREKIKISNENYKEAAD 716

Query: 257  LHCRKFFFKEGDYVWAVLTKDRFLPRENHKMHDRKVRPCIILKRINDNAYKLKLPLHIKS 78
             H R   F+EGD V A L  +RF P    K+  +K  P  +LK + +NAY L+LP ++  
Sbjct: 717  AHRRYIQFQEGDLVMARLRPERFHPSTYQKLQAKKAGPFRVLKWLGENAYLLELPSNLHF 776

Query: 77   SDVFNVKHLLPYKGNVSD 24
            S +FNV+ L  Y G+ +D
Sbjct: 777  SPIFNVEDLYIYHGHHND 794


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  113 bits (282), Expect(2) = 5e-49
 Identities = 51/85 (60%), Positives = 62/85 (72%)
 Frame = -3

Query: 694  HGVPQSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLVNLLRCLA 515
            HGVP +I SDRD KF+ HFWR LW K+GT+L FST  HP+TDGQTEVVNRSL  +LR + 
Sbjct: 1381 HGVPNTIVSDRDAKFLSHFWRCLWAKLGTKLLFSTTCHPQTDGQTEVVNRSLSTMLRAVL 1440

Query: 514  RDKPKQWDLVLPFAEFAYNNSKNRT 440
            ++  K W+  LP  EFAYN S + T
Sbjct: 1441 KNNIKLWEECLPHIEFAYNRSLHST 1465



 Score =  107 bits (268), Expect(2) = 5e-49
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -2

Query: 440  LSPFEVVCGQNPSTALDLAPIPNMKKADIKAEEMVEHIREIHQQVKEQTEANNIRYKAAT 261
            + PFE+V G  P   +DL PIP+ +K +  A+E  E I ++H+  KE  E  N RYK A 
Sbjct: 1468 MCPFEIVYGFLPRAPIDLLPIPSSEKVNFDAKERAELILKMHELTKENIERMNARYKLAG 1527

Query: 260  DLHCRKFFFKEGDYVWAVLTKDRFLPRENHKMHDRKVRPCIILKRINDNAYKLKLPLHIK 81
            D   +   F  GD VW  L KDRF      K+  R   P  +L++INDNAY+L+LP    
Sbjct: 1528 DKGRKHVVFAPGDLVWLHLRKDRFPDLRKSKLMPRAGGPFKVLEKINDNAYRLELPADFG 1587

Query: 80   SSDVFNVKHLLPYKGNVSD*NSRTS 6
             S  FN+  L PY G   +  SRT+
Sbjct: 1588 VSPTFNIADLKPYLGEEDELPSRTT 1612


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  113 bits (283), Expect(2) = 5e-49
 Identities = 50/85 (58%), Positives = 62/85 (72%)
 Frame = -3

Query: 694  HGVPQSITSDRDTKFMGHFWRTLWKKIGTELRFSTAYHPETDGQTEVVNRSLVNLLRCLA 515
            HGVP +I SDRDTKF+ HFWR LW K+G +L FST  HP+TDGQTEVVNR+L  +LR + 
Sbjct: 1366 HGVPNTIVSDRDTKFLSHFWRCLWAKLGNKLLFSTTCHPQTDGQTEVVNRTLSTMLRAVL 1425

Query: 514  RDKPKQWDLVLPFAEFAYNNSKNRT 440
            ++  K W+  LP  EFAYN S + T
Sbjct: 1426 KNNKKMWEECLPHIEFAYNRSLHST 1450



 Score =  107 bits (267), Expect(2) = 5e-49
 Identities = 59/145 (40%), Positives = 79/145 (54%)
 Frame = -2

Query: 440  LSPFEVVCGQNPSTALDLAPIPNMKKADIKAEEMVEHIREIHQQVKEQTEANNIRYKAAT 261
            + PFE+V G  P   +DL P+P+ +K +  A+E  E I +IH+  KE  E  N +YK A 
Sbjct: 1453 MCPFEIVYGFLPRAPIDLLPLPSSEKVNFDAKERSELILKIHELTKENIERMNAKYKLAR 1512

Query: 260  DLHCRKFFFKEGDYVWAVLTKDRFLPRENHKMHDRKVRPCIILKRINDNAYKLKLPLHIK 81
            D   +   F  GD VW  L KDRF      K+  R   P  +L++INDNAYKL+LP    
Sbjct: 1513 DKGRKHVVFAPGDLVWLHLRKDRFPNLRKSKLMPRADGPFKVLEKINDNAYKLELPADFG 1572

Query: 80   SSDVFNVKHLLPYKGNVSD*NSRTS 6
             S  FN+  L PY G   +  SRT+
Sbjct: 1573 VSPTFNIADLKPYLGEEDELPSRTT 1597


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