BLASTX nr result

ID: Bupleurum21_contig00029391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029391
         (639 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27
gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]             100   4e-19
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]              98   1e-18
ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786...    97   2e-18
ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792...    96   6e-18

>ref|XP_002329042.1| predicted protein [Populus trichocarpa] gi|222839713|gb|EEE78036.1|
           predicted protein [Populus trichocarpa]
          Length = 442

 Score =  127 bits (320), Expect = 1e-27
 Identities = 81/229 (35%), Positives = 117/229 (51%), Gaps = 19/229 (8%)
 Frame = +2

Query: 2   GGLRLNIQEALDLHKFWSVSEAYQAALAVEKRLTRGDKSKFRTT*GQDMTGNQRLNTDNQ 181
           G LR+  Q+ L++    SVS+A+Q A+ +EK+L R      R T G +  G+    ++N 
Sbjct: 221 GRLRIQFQDVLNMFDVLSVSDAHQRAVQLEKQLVR------RNTGGLNFGGSGANTSNNS 274

Query: 182 AR-----------GSQNTTMPRKNTPESTTTQNK------GKGSGLKCFKCNEPGHTSAT 310
            R           GS +++  R   P S  T+           +G +CF C E GH  A 
Sbjct: 275 GRTGSMNFGGTGAGSASSSSTRTAIPPSPITKPTMPTHVTTPNTGFRCFNCGELGHRFAE 334

Query: 311 CRREWGKQLMIDGGEHSQSDEFD--EEPMYDSEQEEEILYGDVGESLVIRKAXXXXXXXX 484
           C++   + L  D  E ++  E D   EP+YD   EEE L GD G  L+IR++        
Sbjct: 335 CKKGQRRGLFSDVEEINREQEGDVEAEPVYD---EEERLEGDAGPMLMIRRSCLAPHVVE 391

Query: 485 XXDWLRNNIFHITCTVEGKVCKLIIDSGRCENVISSEAVDKLKLKQEKH 631
             DWLR N+F  TCT+ GK+C+ I+DSG CEN++S E V KL +  E H
Sbjct: 392 D-DWLRTNVFQSTCTISGKICRFIVDSGSCENIVSEEVVRKLHMATESH 439


>gb|ADP20181.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 572

 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 64/209 (30%), Positives = 105/209 (50%)
 Frame = +2

Query: 5   GLRLNIQEALDLHKFWSVSEAYQAALAVEKRLTRGDKSKFRTT*GQDMTGNQRLNTDNQA 184
           GL  +I + ++LH +  + E    A+ VE++L R  +++  +T     +   +   +  A
Sbjct: 207 GLNHDISDIVELHHYVEMDELVHQAIKVEQQLKRKSQARRNSTTFNSQSWKDKTKKEG-A 265

Query: 185 RGSQNTTMPRKNTPESTTTQNKGKGSGLKCFKCNEPGHTSATCRREWGKQLMIDGGEHSQ 364
             S+  T+  K    ++++ +      +KCFKC   GH ++ C     K+ M+   E ++
Sbjct: 266 SSSKEATVENKGKTITSSSSSVSTNKSVKCFKCQGQGHIASQCPT---KRTMLM--EENE 320

Query: 365 SDEFDEEPMYDSEQEEEILYGDVGESLVIRKAXXXXXXXXXXDWLRNNIFHITCTVEGKV 544
               +E+  YD E EEEI  GD+   L++R+              R N+FH  C V+GKV
Sbjct: 321 GIVEEEDGDYDEEFEEEIPSGDL---LMVRRMLGSQIKEEDTGQ-RENLFHTRCFVQGKV 376

Query: 545 CKLIIDSGRCENVISSEAVDKLKLKQEKH 631
           C LIID G C NV S+  V KLKL+ + H
Sbjct: 377 CSLIIDGGSCTNVASTRLVSKLKLETKPH 405


>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
          Length = 1004

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 61/209 (29%), Positives = 105/209 (50%)
 Frame = +2

Query: 5   GLRLNIQEALDLHKFWSVSEAYQAALAVEKRLTRGDKSKFRTT*GQDMTGNQRLNTDNQA 184
           GL  +I + ++LH +  + E    A+ VE++L R  +++  +T     +   +   +  A
Sbjct: 207 GLNHDISDIVELHHYVEMDELVHQAIKVEQQLKRKSQARRNSTTFNSQSWKDKTKKEG-A 265

Query: 185 RGSQNTTMPRKNTPESTTTQNKGKGSGLKCFKCNEPGHTSATCRREWGKQLMIDGGEHSQ 364
             S+  T+  K    ++++ +      +KCFKC   GH ++ C  +  + ++++  E   
Sbjct: 266 SSSKEATVENKGKTITSSSSSVSTNKSVKCFKCQGQGHIASQCPTK--RTMLMEENEEIV 323

Query: 365 SDEFDEEPMYDSEQEEEILYGDVGESLVIRKAXXXXXXXXXXDWLRNNIFHITCTVEGKV 544
            +E  +   YD E  EEI  GD+   L++R+              R N+FHI C V+GKV
Sbjct: 324 EEEDGD---YDKEFGEEIPSGDL---LMVRRMLGSQIKEEDTSQ-RENLFHIRCFVQGKV 376

Query: 545 CKLIIDSGRCENVISSEAVDKLKLKQEKH 631
           C LIID G C NV S+  V +LKL+ + H
Sbjct: 377 CSLIIDGGSCTNVASTRLVSRLKLETKPH 405


>ref|XP_003537359.1| PREDICTED: uncharacterized protein LOC100786304 [Glycine max]
          Length = 1317

 Score = 97.4 bits (241), Expect = 2e-18
 Identities = 64/209 (30%), Positives = 101/209 (48%)
 Frame = +2

Query: 5    GLRLNIQEALDLHKFWSVSEAYQAALAVEKRLTRGDKSKFRTT*GQDMTGNQRLNTDNQA 184
            GL  +I++ ++L +F  + +    A+ VE++L R   +K   T     +   +   D  A
Sbjct: 547  GLTNDIRDIVELQEFVEMDDLLHKAIQVEQQLKRKGVAKRSFTNFGSSSWKDKGKKDGAA 606

Query: 185  RGSQNTTMPRKNTPESTTTQNKGKGSGLKCFKCNEPGHTSATCRREWGKQLMIDGGEHSQ 364
              S +T +P K   +S    +K K   +KCFKC   GH +  C  +  + +++  GE+  
Sbjct: 607  TSSSSTPIPSKTRSKSQEEPSK-KSRDVKCFKCQGLGHYAYECPNK--RSMVLRDGEYIS 663

Query: 365  SDEFDEEPMYDSEQEEEILYGDVGESLVIRKAXXXXXXXXXXDWLRNNIFHITCTVEGKV 544
              + +EE   +  +EEE   GD+   L+IR+              R NIFH  C + GKV
Sbjct: 664  ESDVEEEEESEYVEEEETPEGDL---LMIRRLLGSQLKHEEESQ-RENIFHTRCLINGKV 719

Query: 545  CKLIIDSGRCENVISSEAVDKLKLKQEKH 631
            C +IID G C NV S+  V KL L  + H
Sbjct: 720  CMVIIDGGSCTNVASARLVSKLNLATKPH 748


>ref|XP_003556952.1| PREDICTED: uncharacterized protein LOC100792366, partial [Glycine
           max]
          Length = 871

 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 9/218 (4%)
 Frame = +2

Query: 5   GLRLNIQEALDLHKFWSVSEAYQAALAVEKRLTRGDKSKFRT--T*GQDMTGNQRLNTDN 178
           GL   I++ ++L ++  + +    AL VE+++ R   ++  +  T  Q+     +    N
Sbjct: 215 GLNPEIRDVVELQEYVVLDDLLHRALRVEQQIKRRSATRRNSPNTYNQNWANRSKKEGGN 274

Query: 179 QARGSQNTTMPRKNTPE------STTTQNKGKGS-GLKCFKCNEPGHTSATCRREWGKQL 337
             R +  +   +  TP       +T+T +   G+  +KCFKC   GH ++ C       +
Sbjct: 275 SFRPAATSPYGKSATPSGGGSKHNTSTSSSNTGTRNIKCFKCLGRGHIASECPTR-RTMI 333

Query: 338 MIDGGEHSQSDEFDEEPMYDSEQEEEILYGDVGESLVIRKAXXXXXXXXXXDWLRNNIFH 517
           M   GE +   E  EE + + E EEE + GD+   L++R+           D  R NIFH
Sbjct: 334 MKADGEITSESEISEEEVEEEEYEEEAMQGDM---LMVRRLLGNQMQPLD-DNQRENIFH 389

Query: 518 ITCTVEGKVCKLIIDSGRCENVISSEAVDKLKLKQEKH 631
             C + GK+C LI+D G C NV SS  V KL L+ + H
Sbjct: 390 TRCVINGKLCSLIVDGGSCTNVASSTLVTKLNLETKPH 427


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