BLASTX nr result

ID: Bupleurum21_contig00029346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029346
         (349 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002532375.1| basic helix-loop-helix-containing protein, p...    68   9e-10
ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-...    66   3e-09
emb|CBI37092.3| unnamed protein product [Vitis vinifera]               66   3e-09
ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|2...    61   8e-08
ref|XP_004161538.1| PREDICTED: transcription factor EMB1444-like...    59   4e-07

>ref|XP_002532375.1| basic helix-loop-helix-containing protein, putative [Ricinus
           communis] gi|223527931|gb|EEF30018.1| basic
           helix-loop-helix-containing protein, putative [Ricinus
           communis]
          Length = 749

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 32/47 (68%), Positives = 39/47 (82%)
 Frame = -3

Query: 347 YSDWLLPQFSSGIRTIAVVPVIPHGVVQLGSLDIIAEDLMLINHIKD 207
           +SD    QFS+GIRTI VV V+PHGVVQLGSL+ +AED+ L+NHIKD
Sbjct: 118 FSDGWQSQFSAGIRTIIVVAVVPHGVVQLGSLNKVAEDMKLVNHIKD 164


>ref|XP_003632423.1| PREDICTED: uncharacterized basic helix-loop-helix protein
           At1g06150-like [Vitis vinifera]
          Length = 749

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = -3

Query: 347 YSDWLLPQFSSGIRTIAVVPVIPHGVVQLGSLDIIAEDLMLINHIKDNLFDFGAPSAGY- 171
           Y D    QFS+GI+TI VV V+PHGVVQLGSL  + EDL L++ IKD  F     S  Y 
Sbjct: 118 YCDGWQAQFSAGIKTIVVVAVVPHGVVQLGSLQQVVEDLKLVSRIKDVFFALQDSSVAYI 177

Query: 170 -HCIESSPCLLSPSLRQKHSHTRTKA 96
            H I+   C +  SL      TR  A
Sbjct: 178 PHPIQ---CSMKSSLAMSDISTRGSA 200


>emb|CBI37092.3| unnamed protein product [Vitis vinifera]
          Length = 774

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 40/86 (46%), Positives = 48/86 (55%), Gaps = 2/86 (2%)
 Frame = -3

Query: 347 YSDWLLPQFSSGIRTIAVVPVIPHGVVQLGSLDIIAEDLMLINHIKDNLFDFGAPSAGY- 171
           Y D    QFS+GI+TI VV V+PHGVVQLGSL  + EDL L++ IKD  F     S  Y 
Sbjct: 143 YCDGWQAQFSAGIKTIVVVAVVPHGVVQLGSLQQVVEDLKLVSRIKDVFFALQDSSVAYI 202

Query: 170 -HCIESSPCLLSPSLRQKHSHTRTKA 96
            H I+   C +  SL      TR  A
Sbjct: 203 PHPIQ---CSMKSSLAMSDISTRGSA 225


>ref|XP_002309084.1| predicted protein [Populus trichocarpa] gi|222855060|gb|EEE92607.1|
           predicted protein [Populus trichocarpa]
          Length = 708

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 28/49 (57%), Positives = 39/49 (79%)
 Frame = -3

Query: 341 DWLLPQFSSGIRTIAVVPVIPHGVVQLGSLDIIAEDLMLINHIKDNLFD 195
           +WLL QF+SGI+TI +VPV+PHGV+QLGS D +AED+ ++ +IK    D
Sbjct: 137 EWLL-QFASGIKTILLVPVLPHGVLQLGSFDEVAEDIQIVAYIKGRFND 184


>ref|XP_004161538.1| PREDICTED: transcription factor EMB1444-like [Cucumis sativus]
          Length = 691

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 29/58 (50%), Positives = 38/58 (65%)
 Frame = -3

Query: 347 YSDWLLPQFSSGIRTIAVVPVIPHGVVQLGSLDIIAEDLMLINHIKDNLFDFGAPSAG 174
           Y D    QFS+GI+TI VV V+PHGV+QLGSLD + ED+ L+  I++        SAG
Sbjct: 119 YCDGWQTQFSAGIKTIVVVAVVPHGVLQLGSLDKVTEDVNLVTRIRNVFLTLQESSAG 176


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