BLASTX nr result

ID: Bupleurum21_contig00029337 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029337
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]    80   2e-13
emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]    76   5e-12
gb|AAT38747.2| Polyprotein, putative [Solanum demissum]                75   8e-12
gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]          74   1e-11
ref|XP_002272586.2| PREDICTED: uncharacterized protein LOC100248...    74   1e-11

>emb|CAN68148.1| hypothetical protein VITISV_035665 [Vitis vinifera]
          Length = 1813

 Score = 80.5 bits (197), Expect = 2e-13
 Identities = 41/63 (65%), Positives = 49/63 (77%)
 Frame = -1

Query: 190  LDKLPTVLWTILQAAVDIASNPVHHARTKHIELDCHFIREKVQAGVICPQKISTKFQLAD 11
            LDK P  L+   QAA+ IA+NPV H RTKHIE+DCH +REK+QAGVI P  +STK QLAD
Sbjct: 1644 LDK-PAPLFCDNQAALYIAANPVFHERTKHIEIDCHIVREKLQAGVIRPCYVSTKMQLAD 1702

Query: 10   IFT 2
            +FT
Sbjct: 1703 VFT 1705


>emb|CAN60648.1| hypothetical protein VITISV_033947 [Vitis vinifera]
          Length = 1257

 Score = 75.9 bits (185), Expect = 5e-12
 Identities = 33/60 (55%), Positives = 44/60 (73%)
 Frame = -1

Query: 181  LPTVLWTILQAAVDIASNPVHHARTKHIELDCHFIREKVQAGVICPQKISTKFQLADIFT 2
            +P  LW   QAA+ IA+NPV+H RTKHIE+DCHFIREK++  ++    + T+ QL DIFT
Sbjct: 1175 MPAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTSYVKTREQLGDIFT 1234


>gb|AAT38747.2| Polyprotein, putative [Solanum demissum]
          Length = 1402

 Score = 75.1 bits (183), Expect = 8e-12
 Identities = 35/56 (62%), Positives = 42/56 (75%)
 Frame = -1

Query: 169  LWTILQAAVDIASNPVHHARTKHIELDCHFIREKVQAGVICPQKISTKFQLADIFT 2
            LW   QAA+ IASNPV+H RTKHIE+DCHFIREK+Q  +I    + T  QLAD+FT
Sbjct: 1323 LWCDNQAALHIASNPVYHERTKHIEVDCHFIREKIQENLISTSYVKTGEQLADLFT 1378


>gb|AAO26690.1|AF478377_1 gag-pol polyprotein [Vitis vinifera]
          Length = 326

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 33/60 (55%), Positives = 43/60 (71%)
 Frame = -1

Query: 181 LPTVLWTILQAAVDIASNPVHHARTKHIELDCHFIREKVQAGVICPQKISTKFQLADIFT 2
           +P  LW   QAA+ IA+NPV+H RTKHIE+DCHFIREK++  ++    + T  QL DIFT
Sbjct: 243 MPAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLVSTDYVKTGEQLGDIFT 302


>ref|XP_002272586.2| PREDICTED: uncharacterized protein LOC100248980 [Vitis vinifera]
          Length = 1123

 Score = 74.3 bits (181), Expect = 1e-11
 Identities = 34/60 (56%), Positives = 43/60 (71%)
 Frame = -1

Query: 181 LPTVLWTILQAAVDIASNPVHHARTKHIELDCHFIREKVQAGVICPQKISTKFQLADIFT 2
           +P  LW   QAA+ IA+NPV+H RTKHIE+DCHFIREK++  +I    + T  QL DIFT
Sbjct: 567 MPAKLWCDNQAALHIAANPVYHERTKHIEVDCHFIREKIEENLISTSYVKTGEQLRDIFT 626


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