BLASTX nr result
ID: Bupleurum21_contig00029334
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Bupleurum21_contig00029334 (317 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002529187.1| hypothetical protein RCOM_0684740 [Ricinus c... 65 1e-21 ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containin... 63 8e-21 ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin... 62 1e-20 ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containin... 64 2e-20 ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|2... 61 1e-19 >ref|XP_002529187.1| hypothetical protein RCOM_0684740 [Ricinus communis] gi|223531365|gb|EEF33201.1| hypothetical protein RCOM_0684740 [Ricinus communis] Length = 504 Score = 64.7 bits (156), Expect(2) = 1e-21 Identities = 29/34 (85%), Positives = 31/34 (91%) Frame = -3 Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1 GDACMGDVVMFEQ VYEM+NIASRS+ GPP GTR Sbjct: 67 GDACMGDVVMFEQNVYEMYNIASRSASGPPCGTR 100 Score = 63.2 bits (152), Expect(2) = 1e-21 Identities = 29/40 (72%), Positives = 33/40 (82%) Frame = -1 Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198 LRL+G KDTLI+RIKEH +ILN GGEK YP SS +NCKG Sbjct: 28 LRLTGNKDTLIQRIKEHQEILNGGGEKKYPLSSFVLNCKG 67 >ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis sativus] gi|449480674|ref|XP_004155964.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Cucumis sativus] Length = 498 Score = 62.8 bits (151), Expect(2) = 8e-21 Identities = 30/40 (75%), Positives = 32/40 (80%) Frame = -1 Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198 LRLSG KD LI+RIKEHL+ILN GGEK YP S VNCKG Sbjct: 124 LRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKG 163 Score = 62.4 bits (150), Expect(2) = 8e-21 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -3 Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1 GDACMGD+VMFEQ VYEM+NIASRSS GP GTR Sbjct: 163 GDACMGDIVMFEQKVYEMYNIASRSSTGPSCGTR 196 >ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis vinifera] gi|297742965|emb|CBI35832.3| unnamed protein product [Vitis vinifera] Length = 438 Score = 62.4 bits (150), Expect(2) = 1e-20 Identities = 28/40 (70%), Positives = 33/40 (82%) Frame = -1 Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198 LRL+G K+TLI+RIKEHL I+N GGEK YP SS +NCKG Sbjct: 119 LRLTGNKETLIQRIKEHLGIINGGGEKKYPVSSFVLNCKG 158 Score = 62.0 bits (149), Expect(2) = 1e-20 Identities = 28/34 (82%), Positives = 30/34 (88%) Frame = -3 Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1 GDAC GDVVMFEQ VYEMFNIASRS+ GPP G+R Sbjct: 158 GDACTGDVVMFEQNVYEMFNIASRSASGPPCGSR 191 >ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like [Glycine max] Length = 463 Score = 63.9 bits (154), Expect(2) = 2e-20 Identities = 31/40 (77%), Positives = 34/40 (85%) Frame = -1 Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198 LRL+G KDTLI+RIKEHLDILN GGEK YP SS +NCKG Sbjct: 107 LRLTGNKDTLIQRIKEHLDILN-GGEKKYPPSSFVLNCKG 145 Score = 60.1 bits (144), Expect(2) = 2e-20 Identities = 27/34 (79%), Positives = 29/34 (85%) Frame = -3 Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1 GDAC GDVV+FEQ VYEMFNIASRS+ GPP G R Sbjct: 145 GDACTGDVVLFEQNVYEMFNIASRSASGPPCGKR 178 >ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|222841665|gb|EEE79212.1| predicted protein [Populus trichocarpa] Length = 515 Score = 61.2 bits (147), Expect(2) = 1e-19 Identities = 28/40 (70%), Positives = 34/40 (85%) Frame = -1 Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198 LRL+GKKDTLI+RIKEH +IL+ GGEK YP SS ++CKG Sbjct: 132 LRLTGKKDTLIQRIKEHQEILSGGGEKKYPISSFVLDCKG 171 Score = 60.1 bits (144), Expect(2) = 1e-19 Identities = 24/34 (70%), Positives = 31/34 (91%) Frame = -3 Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1 GDAC GD+VMF+Q VY+ +NIASRS++GPP+GTR Sbjct: 171 GDACRGDIVMFDQNVYDKYNIASRSAMGPPIGTR 204