BLASTX nr result

ID: Bupleurum21_contig00029334 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029334
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529187.1| hypothetical protein RCOM_0684740 [Ricinus c...    65   1e-21
ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containin...    63   8e-21
ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containin...    62   1e-20
ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containin...    64   2e-20
ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|2...    61   1e-19

>ref|XP_002529187.1| hypothetical protein RCOM_0684740 [Ricinus communis]
           gi|223531365|gb|EEF33201.1| hypothetical protein
           RCOM_0684740 [Ricinus communis]
          Length = 504

 Score = 64.7 bits (156), Expect(2) = 1e-21
 Identities = 29/34 (85%), Positives = 31/34 (91%)
 Frame = -3

Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1
           GDACMGDVVMFEQ VYEM+NIASRS+ GPP GTR
Sbjct: 67  GDACMGDVVMFEQNVYEMYNIASRSASGPPCGTR 100



 Score = 63.2 bits (152), Expect(2) = 1e-21
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = -1

Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198
           LRL+G KDTLI+RIKEH +ILN GGEK YP SS  +NCKG
Sbjct: 28  LRLTGNKDTLIQRIKEHQEILNGGGEKKYPLSSFVLNCKG 67


>ref|XP_004141817.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Cucumis sativus] gi|449480674|ref|XP_004155964.1|
           PREDICTED: zinc finger CCCH domain-containing protein
           62-like [Cucumis sativus]
          Length = 498

 Score = 62.8 bits (151), Expect(2) = 8e-21
 Identities = 30/40 (75%), Positives = 32/40 (80%)
 Frame = -1

Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198
           LRLSG KD LI+RIKEHL+ILN GGEK YP  S  VNCKG
Sbjct: 124 LRLSGTKDVLIQRIKEHLEILNGGGEKKYPEYSFIVNCKG 163



 Score = 62.4 bits (150), Expect(2) = 8e-21
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1
           GDACMGD+VMFEQ VYEM+NIASRSS GP  GTR
Sbjct: 163 GDACMGDIVMFEQKVYEMYNIASRSSTGPSCGTR 196


>ref|XP_002272277.1| PREDICTED: zinc finger CCCH domain-containing protein 62 [Vitis
           vinifera] gi|297742965|emb|CBI35832.3| unnamed protein
           product [Vitis vinifera]
          Length = 438

 Score = 62.4 bits (150), Expect(2) = 1e-20
 Identities = 28/40 (70%), Positives = 33/40 (82%)
 Frame = -1

Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198
           LRL+G K+TLI+RIKEHL I+N GGEK YP SS  +NCKG
Sbjct: 119 LRLTGNKETLIQRIKEHLGIINGGGEKKYPVSSFVLNCKG 158



 Score = 62.0 bits (149), Expect(2) = 1e-20
 Identities = 28/34 (82%), Positives = 30/34 (88%)
 Frame = -3

Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1
           GDAC GDVVMFEQ VYEMFNIASRS+ GPP G+R
Sbjct: 158 GDACTGDVVMFEQNVYEMFNIASRSASGPPCGSR 191


>ref|XP_003548373.1| PREDICTED: zinc finger CCCH domain-containing protein 62-like
           [Glycine max]
          Length = 463

 Score = 63.9 bits (154), Expect(2) = 2e-20
 Identities = 31/40 (77%), Positives = 34/40 (85%)
 Frame = -1

Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198
           LRL+G KDTLI+RIKEHLDILN GGEK YP SS  +NCKG
Sbjct: 107 LRLTGNKDTLIQRIKEHLDILN-GGEKKYPPSSFVLNCKG 145



 Score = 60.1 bits (144), Expect(2) = 2e-20
 Identities = 27/34 (79%), Positives = 29/34 (85%)
 Frame = -3

Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1
           GDAC GDVV+FEQ VYEMFNIASRS+ GPP G R
Sbjct: 145 GDACTGDVVLFEQNVYEMFNIASRSASGPPCGKR 178


>ref|XP_002304233.1| predicted protein [Populus trichocarpa] gi|222841665|gb|EEE79212.1|
           predicted protein [Populus trichocarpa]
          Length = 515

 Score = 61.2 bits (147), Expect(2) = 1e-19
 Identities = 28/40 (70%), Positives = 34/40 (85%)
 Frame = -1

Query: 317 LRLSGKKDTLIERIKEHLDILNIGGEKMYPASSITVNCKG 198
           LRL+GKKDTLI+RIKEH +IL+ GGEK YP SS  ++CKG
Sbjct: 132 LRLTGKKDTLIQRIKEHQEILSGGGEKKYPISSFVLDCKG 171



 Score = 60.1 bits (144), Expect(2) = 1e-19
 Identities = 24/34 (70%), Positives = 31/34 (91%)
 Frame = -3

Query: 102 GDACMGDVVMFEQTVYEMFNIASRSSIGPPVGTR 1
           GDAC GD+VMF+Q VY+ +NIASRS++GPP+GTR
Sbjct: 171 GDACRGDIVMFDQNVYDKYNIASRSAMGPPIGTR 204


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