BLASTX nr result

ID: Bupleurum21_contig00029256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029256
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002446100.1| hypothetical protein SORBIDRAFT_06g001780 [S...    65   5e-09
ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [S...    64   1e-08
ref|XP_002447492.1| hypothetical protein SORBIDRAFT_06g001900 [S...    63   3e-08
gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]         62   5e-08
ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea ma...    62   5e-08

>ref|XP_002446100.1| hypothetical protein SORBIDRAFT_06g001780 [Sorghum bicolor]
           gi|241937283|gb|EES10428.1| hypothetical protein
           SORBIDRAFT_06g001780 [Sorghum bicolor]
          Length = 560

 Score = 65.5 bits (158), Expect = 5e-09
 Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 7/107 (6%)
 Frame = -2

Query: 309 NLSELEASEQSSTITLQSEI----DRINTNLELGHPFRAILASPADRPCNWIP---NRLC 151
           +LS   A+E SS +T Q  +    D+     EL  P RA+    A   C   P   N LC
Sbjct: 36  DLSWPAAAEISSALTKQKSLVALCDKYGVPGEL-KPVRAVSLRCA--ACETPPKGSNALC 92

Query: 150 VFREQLEGGFRVPVHDFIPRLLAEARVSPCQLAPNAWKIIHCFLVRC 10
           ++ + LE G R P+HDF  +LL   R++P QL PNAWK +  F++RC
Sbjct: 93  IYSDALEAGLRFPLHDFYLKLLRHYRLAPSQLVPNAWKYMAAFVLRC 139


>ref|XP_002437934.1| hypothetical protein SORBIDRAFT_10g005066 [Sorghum bicolor]
           gi|241916157|gb|EER89301.1| hypothetical protein
           SORBIDRAFT_10g005066 [Sorghum bicolor]
          Length = 553

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/146 (30%), Positives = 72/146 (49%), Gaps = 1/146 (0%)
 Frame = -2

Query: 441 SSNPSSQTLGATKRTRKGTNSPLLVHISSTSLKDILNEHAEEFSNLSELEASEQSSTITL 262
           S++ SS  LG         + P+++ +S T      ++       LS   A   +S++T 
Sbjct: 3   SASSSSSPLG---------DDPIIIEVSDT------DDDGGGGVALSTKVAERIASSLT- 46

Query: 261 QSEIDRINTNLELGHPFRAILASPADRPCNWIP-NRLCVFREQLEGGFRVPVHDFIPRLL 85
           Q E+D I +   +   + A+L +   R C+ +P   +CV    LE G RVP+H F   +L
Sbjct: 47  QEELDAICSKYGVPEQYSAVLPAGHQRACSPLPPGAICVNEHALEAGMRVPLHAFFCEVL 106

Query: 84  AEARVSPCQLAPNAWKIIHCFLVRCH 7
           A   V+P Q+APN W+ +  F+V  H
Sbjct: 107 AHFGVAPIQIAPNGWRAMAGFIVLSH 132


>ref|XP_002447492.1| hypothetical protein SORBIDRAFT_06g001900 [Sorghum bicolor]
           gi|241938675|gb|EES11820.1| hypothetical protein
           SORBIDRAFT_06g001900 [Sorghum bicolor]
          Length = 516

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 35/103 (33%), Positives = 54/103 (52%), Gaps = 4/103 (3%)
 Frame = -2

Query: 306 LSELEASEQSSTITLQSEIDRINTNLELGHPFRAILASPAD-RPCNWIP---NRLCVFRE 139
           LS   A+E  S +T Q  +  +  N  +   F+ + A       C   P   N LC++ +
Sbjct: 47  LSWPAAAEIESKLTKQESLVTLCDNYGIPREFKPVSADTLRCGVCETPPQGSNALCIYSD 106

Query: 138 QLEGGFRVPVHDFIPRLLAEARVSPCQLAPNAWKIIHCFLVRC 10
            ++ G R P+HDF  +LL   R++P QL PNAWK +  F++RC
Sbjct: 107 AVDAGLRFPLHDFYLKLLRHYRLAPTQLVPNAWKYMAAFVLRC 149


>gb|AFW85616.1| hypothetical protein ZEAMMB73_558830 [Zea mays]
          Length = 407

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/148 (29%), Positives = 70/148 (47%)
 Frame = -2

Query: 450 AEQSSNPSSQTLGATKRTRKGTNSPLLVHISSTSLKDILNEHAEEFSNLSELEASEQSST 271
           A  SS+ S   +G + R R   + P++       + D ++E       LS L A   +S+
Sbjct: 4   ASSSSSSSLYIIGDSSRLR---DDPII------EVGD-MDEDGSSGGALSGLVAERFASS 53

Query: 270 ITLQSEIDRINTNLELGHPFRAILASPADRPCNWIPNRLCVFREQLEGGFRVPVHDFIPR 91
              Q  ID +     +   + A+L +   R C+   + + V+   LE G RVP+H F   
Sbjct: 54  FETQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCE 113

Query: 90  LLAEARVSPCQLAPNAWKIIHCFLVRCH 7
           +LA   V+P Q+APN W+ +  F+V  H
Sbjct: 114 VLAHFGVAPSQIAPNGWRAMAGFVVLSH 141


>ref|NP_001132392.1| uncharacterized protein LOC100193838 [Zea mays]
           gi|194694258|gb|ACF81213.1| unknown [Zea mays]
           gi|413952966|gb|AFW85615.1| hypothetical protein
           ZEAMMB73_558830 [Zea mays]
          Length = 513

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 43/148 (29%), Positives = 70/148 (47%)
 Frame = -2

Query: 450 AEQSSNPSSQTLGATKRTRKGTNSPLLVHISSTSLKDILNEHAEEFSNLSELEASEQSST 271
           A  SS+ S   +G + R R   + P++       + D ++E       LS L A   +S+
Sbjct: 4   ASSSSSSSLYIIGDSSRLR---DDPII------EVGD-MDEDGSSGGALSGLVAERFASS 53

Query: 270 ITLQSEIDRINTNLELGHPFRAILASPADRPCNWIPNRLCVFREQLEGGFRVPVHDFIPR 91
              Q  ID +     +   + A+L +   R C+   + + V+   LE G RVP+H F   
Sbjct: 54  FETQGSIDALCRKYGVPEQYSAVLPAGHQRACSPPGSAVSVYAHALEAGMRVPLHGFFCE 113

Query: 90  LLAEARVSPCQLAPNAWKIIHCFLVRCH 7
           +LA   V+P Q+APN W+ +  F+V  H
Sbjct: 114 VLAHFGVAPSQIAPNGWRAMAGFVVLSH 141


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