BLASTX nr result

ID: Bupleurum21_contig00029201 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029201
         (327 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002464793.1| hypothetical protein SORBIDRAFT_01g026820 [S...    56   1e-10
ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [S...    51   2e-10
ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227...    55   2e-09
ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [S...    50   2e-08
gb|ABA94783.1| hAT family dimerisation domain containing protein...    46   3e-08

>ref|XP_002464793.1| hypothetical protein SORBIDRAFT_01g026820 [Sorghum bicolor]
           gi|241918647|gb|EER91791.1| hypothetical protein
           SORBIDRAFT_01g026820 [Sorghum bicolor]
          Length = 650

 Score = 55.8 bits (133), Expect(3) = 1e-10
 Identities = 26/62 (41%), Positives = 41/62 (66%)
 Frame = -2

Query: 320 ITMFIMNYGKALTMYLKHSEHMLVKTAETHFASHVIMAQRLLLLKNGLEKIVLDPNWKTF 141
           I  +IMN+G  L+M+ ++S+   +  A+T FASHVIM +R L+LK  L  +V+   W T+
Sbjct: 325 IKNYIMNHGMRLSMFNEYSKLKFLAVADTRFASHVIMLKRFLVLKESLVLMVVGDKWSTY 384

Query: 140 RK 135
           R+
Sbjct: 385 RE 386



 Score = 33.9 bits (76), Expect(3) = 1e-10
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -3

Query: 76  DNLEYFVAFTSSIYNIIRLADTD 8
           DN++Y V FT  IY+++R+ADTD
Sbjct: 406 DNVKYIVEFTEPIYSMLRVADTD 428



 Score = 20.4 bits (41), Expect(3) = 1e-10
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -1

Query: 108 VKECVLSDRWW 76
           VKE +L D WW
Sbjct: 395 VKEKLLDDFWW 405


>ref|XP_002443069.1| hypothetical protein SORBIDRAFT_08g007560 [Sorghum bicolor]
           gi|241943762|gb|EES16907.1| hypothetical protein
           SORBIDRAFT_08g007560 [Sorghum bicolor]
          Length = 713

 Score = 50.8 bits (120), Expect(3) = 2e-10
 Identities = 23/64 (35%), Positives = 41/64 (64%)
 Frame = -2

Query: 320 ITMFIMNYGKALTMYLKHSEHMLVKTAETHFASHVIMAQRLLLLKNGLEKIVLDPNWKTF 141
           I  +IMN+   L+M+ + S+  L+  AET FAS V+M  R L++K  L+++V+   W+++
Sbjct: 343 IKNYIMNHSMRLSMFNEFSKLKLLAVAETRFASVVVMLTRFLMVKRALQRMVISDAWESY 402

Query: 140 RKKN 129
           +  N
Sbjct: 403 KDDN 406



 Score = 36.2 bits (82), Expect(3) = 2e-10
 Identities = 14/25 (56%), Positives = 19/25 (76%)
 Frame = -3

Query: 76  DNLEYFVAFTSSIYNIIRLADTDTP 2
           DN++Y V FT  IY ++R+ADTD P
Sbjct: 424 DNVQYIVDFTDPIYEMLRMADTDRP 448



 Score = 22.3 bits (46), Expect(3) = 2e-10
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = -1

Query: 111 HVKECVLSDRWW 76
           HV+E +L  +WW
Sbjct: 412 HVREKILCSKWW 423


>ref|XP_004157048.1| PREDICTED: uncharacterized protein LOC101227643 [Cucumis sativus]
          Length = 411

 Score = 55.1 bits (131), Expect(2) = 2e-09
 Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
 Frame = -2

Query: 320 ITMFIMNYGKALTMYLKHSEHMLVKTAETHFASHVIMAQRLLLLKNGLEKIVLDPNWKTF 141
           +  FIMN+   L M+ +     L+  AETHF S +IM +R  L+K+GL+ +V+   WK++
Sbjct: 113 VKFFIMNHSMRLAMFNEFVPLKLLSIAETHFPSAIIMLKRFKLIKSGLQAMVISDKWKSY 172

Query: 140 RK----KNERLKLIMLRSVFF 90
           R+    K   +K ++L  +++
Sbjct: 173 REDDVVKARHVKELVLEEIWW 193



 Score = 31.6 bits (70), Expect(2) = 2e-09
 Identities = 12/25 (48%), Positives = 18/25 (72%)
 Frame = -3

Query: 76  DNLEYFVAFTSSIYNIIRLADTDTP 2
           D + Y ++FTS IY+++R  DTD P
Sbjct: 194 DKINYILSFTSPIYDMLRDCDTDKP 218


>ref|XP_002458511.1| hypothetical protein SORBIDRAFT_03g034920 [Sorghum bicolor]
           gi|241930486|gb|EES03631.1| hypothetical protein
           SORBIDRAFT_03g034920 [Sorghum bicolor]
          Length = 687

 Score = 50.1 bits (118), Expect(2) = 2e-08
 Identities = 24/62 (38%), Positives = 39/62 (62%)
 Frame = -2

Query: 320 ITMFIMNYGKALTMYLKHSEHMLVKTAETHFASHVIMAQRLLLLKNGLEKIVLDPNWKTF 141
           I  FIMN+G  L+M+ + S   L+  AET FAS V M +R + +K+ L+++V+   W  +
Sbjct: 309 IKNFIMNHGMRLSMFNEFSRLKLLSIAETRFASVVCMLKRFVEVKSALQQMVISDKWSVY 368

Query: 140 RK 135
           R+
Sbjct: 369 RE 370



 Score = 33.5 bits (75), Expect(2) = 2e-08
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -3

Query: 76  DNLEYFVAFTSSIYNIIRLADTDTP 2
           D ++Y +  T+ IY +IRL DTDTP
Sbjct: 394 DKVDYILKITTPIYEMIRLTDTDTP 418


>gb|ABA94783.1| hAT family dimerisation domain containing protein [Oryza sativa
           Japonica Group]
          Length = 749

 Score = 45.8 bits (107), Expect(3) = 3e-08
 Identities = 22/65 (33%), Positives = 36/65 (55%)
 Frame = -2

Query: 320 ITMFIMNYGKALTMYLKHSEHMLVKTAETHFASHVIMAQRLLLLKNGLEKIVLDPNWKTF 141
           I  FIMN+   L+M+   S+   +  A+T FAS ++M +R   +K  L  +V    W T+
Sbjct: 374 IKNFIMNHSMRLSMFNDFSKLKFLAIADTRFASTIVMLKRFRAIKENLILMVASEKWNTY 433

Query: 140 RKKNE 126
           R+ N+
Sbjct: 434 REDNQ 438



 Score = 30.8 bits (68), Expect(3) = 3e-08
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -3

Query: 76  DNLEYFVAFTSSIYNIIRLADTDTP 2
           D ++Y + F   IY++IR ADTD P
Sbjct: 455 DKVKYIIDFCEPIYSMIRAADTDKP 479



 Score = 25.0 bits (53), Expect(3) = 3e-08
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = -1

Query: 111 HVKECVLSDRWW 76
           HVKE +L+D WW
Sbjct: 443 HVKEKILNDLWW 454


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