BLASTX nr result

ID: Bupleurum21_contig00029122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029122
         (544 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK13073.1| conserved hypothetical protein 16 [Hevea brasilie...   117   2e-24
gb|ADK13072.1| conserved hypothetical protein 15 [Hevea brasilie...   117   2e-24
ref|XP_004149739.1| PREDICTED: UPF0496 protein 4-like [Cucumis s...   110   2e-22
ref|XP_002313325.1| predicted protein [Populus trichocarpa] gi|2...   106   2e-21
ref|XP_004136131.1| PREDICTED: protein BPS1, chloroplastic-like ...    92   7e-17

>gb|ADK13073.1| conserved hypothetical protein 16 [Hevea brasiliensis]
          Length = 239

 Score =  117 bits (292), Expect = 2e-24
 Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
 Frame = -1

Query: 541 LNSISFALSRLSQARISLSHASSLTESFAADKLRPLNEIEYKIFSNDEK-VDGIGERKEK 365
           LN  S ALS L  AR+SLSHA SL +S  +  +  L  IE+K    + K  +   + K++
Sbjct: 39  LNYFSSALSHLGLARLSLSHALSLVKSSPSSAMERLKMIEFKSLRKEFKDQENKEDEKKR 98

Query: 364 SLCGKELALHEALSVLKSIGSWTCSVVISGICSDVEPYLKMRRSAELHILPPLVALDSIV 185
           S   KE  + +AL  L+S G W CS+V++G+C D   YLKMRR+      P L+ LDSI+
Sbjct: 99  SSSDKEWVILQALLELRSTGFWVCSIVLAGLCGDDRAYLKMRRAVGALSNPALINLDSII 158

Query: 184 YKKVLKNRELVKEIKDVNDALQCHVSADNSET-DDRAKELQRRLEAIEKAQTAIEGVVNL 8
              V++   ++KE++++ DA  C  +A  S+   D A+E+QR+L+  EK    I   VN 
Sbjct: 159 CGVVMEKGCVLKEVRELKDAADCLAAAIASKNGSDAAEEMQRKLQEFEKLLDGISKEVNC 218

Query: 7   MF 2
           +F
Sbjct: 219 LF 220


>gb|ADK13072.1| conserved hypothetical protein 15 [Hevea brasiliensis]
          Length = 239

 Score =  117 bits (292), Expect = 2e-24
 Identities = 70/182 (38%), Positives = 105/182 (57%), Gaps = 2/182 (1%)
 Frame = -1

Query: 541 LNSISFALSRLSQARISLSHASSLTESFAADKLRPLNEIEYKIFSNDEK-VDGIGERKEK 365
           LN  S ALS L  AR+SLSHA SL +S  +  +  L  IE+K    + K  +   + K++
Sbjct: 39  LNYFSSALSHLGLARLSLSHALSLVKSSPSSAMERLKMIEFKSLRKEFKDQENKEDEKKR 98

Query: 364 SLCGKELALHEALSVLKSIGSWTCSVVISGICSDVEPYLKMRRSAELHILPPLVALDSIV 185
           S   KE  + +AL  L+S G W CS+V++G+C D   YLKMRR+      P L+ LDSI+
Sbjct: 99  SSSDKEWVILQALLELRSTGFWVCSIVLAGLCGDDRAYLKMRRAVGALSNPALINLDSII 158

Query: 184 YKKVLKNRELVKEIKDVNDALQCHVSADNSET-DDRAKELQRRLEAIEKAQTAIEGVVNL 8
              V++   ++KE++++ DA  C  +A  S+   D A+E+QR+L+  EK    I   VN 
Sbjct: 159 CGVVMEKGCVLKEVRELKDAADCLAAAIASKNGSDAAEEMQRKLQEFEKLLDGISKEVNC 218

Query: 7   MF 2
           +F
Sbjct: 219 LF 220


>ref|XP_004149739.1| PREDICTED: UPF0496 protein 4-like [Cucumis sativus]
          Length = 280

 Score =  110 bits (274), Expect = 2e-22
 Identities = 72/186 (38%), Positives = 109/186 (58%), Gaps = 6/186 (3%)
 Frame = -1

Query: 541 LNSISFALSRLSQARISLSHASSLTE---SFAADKLRPLNEIEY--KIFSNDEKVDGIGE 377
           LNSI+  ++ L QAR+ LSHA SL E   S A D+L+P+    +  +     E V+ I  
Sbjct: 81  LNSITSCIAHLGQARLKLSHALSLVEDSPSSAIDRLKPIGTSSFSKEPIKEGENVE-ICV 139

Query: 376 RKEKSLCGKELALHEALSVLKSIGSWTCSVVISGICSDVEPYLKMRRSAELHILPPLVAL 197
             EKS   K+L +H AL ++K IG W C +VISG+  D E +L+MR+S +   +  L  L
Sbjct: 140 EVEKS--EKKLVVHRALMIMKQIGLWVCGIVISGLSGDAEAFLEMRKSYDEFGVSGLDRL 197

Query: 196 DSIVYKKVLKNRELVKEIKDVNDALQCHV-SADNSETDDRAKELQRRLEAIEKAQTAIEG 20
           D IV+K + ++   +KEIK+VNDA++  V S    ++ D A+ L +RLE +EK    +  
Sbjct: 198 DFIVHKAICESGVRLKEIKEVNDAVELLVASVAAGKSSDAAQNLHKRLEVLEKEVDDLRK 257

Query: 19  VVNLMF 2
            V+ +F
Sbjct: 258 EVDSLF 263


>ref|XP_002313325.1| predicted protein [Populus trichocarpa] gi|222849733|gb|EEE87280.1|
           predicted protein [Populus trichocarpa]
          Length = 295

 Score =  106 bits (265), Expect = 2e-21
 Identities = 60/183 (32%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
 Frame = -1

Query: 541 LNSISFALSRLSQARISLSHASSLTESFAADKLRPLNEIEYKI-FSNDEKVDGIGERKEK 365
           LNSIS +LS L + R+SL+H+ SL +S  +  +  +  I++     N +  D I + K++
Sbjct: 94  LNSISSSLSHLERGRLSLAHSLSLVKSSPSSAIEHIKAIKFNSSIKNFKGQDNIDDEKDR 153

Query: 364 SLCGKELALHEALSVLKSIGSWTCSVVISGICSDVEPYLKMRRSAE-LHILPPLVALDSI 188
              G+E  + +AL  LKS+G W C V+++G+  D + YL+MR+S   +     ++ LD  
Sbjct: 154 PCSGEEWIIDQALIELKSVGFWVCYVLLAGLSGDAKAYLEMRKSTTGIFSNSSVIKLDMS 213

Query: 187 VYKKVLKNRELVKEIKDVNDALQCHVSADNSETDD-RAKELQRRLEAIEKAQTAIEGVVN 11
           + + V+    ++KE+K++ +A  C  +A  +E +  RA+E+QRRL+A E+    ++  VN
Sbjct: 214 ISEAVMDRGVVLKEVKELKEAADCIAAATANEKESYRAEEMQRRLKAFEQLLDGLDKEVN 273

Query: 10  LMF 2
            +F
Sbjct: 274 SLF 276


>ref|XP_004136131.1| PREDICTED: protein BPS1, chloroplastic-like [Cucumis sativus]
           gi|449489148|ref|XP_004158229.1| PREDICTED: protein
           BPS1, chloroplastic-like [Cucumis sativus]
          Length = 306

 Score = 91.7 bits (226), Expect = 7e-17
 Identities = 55/174 (31%), Positives = 92/174 (52%)
 Frame = -1

Query: 541 LNSISFALSRLSQARISLSHASSLTESFAADKLRPLNEIEYKIFSNDEKVDGIGERKEKS 362
           LNSISF+L++L  +R+ LS+A SL ES  A  +  L  I  K +S   ++    +  +K 
Sbjct: 112 LNSISFSLTQLGNSRVLLSYALSLIESSPAMAVSRLKPIVLKRYSEGLEIKANVKDLKKG 171

Query: 361 LCGKELALHEALSVLKSIGSWTCSVVISGICSDVEPYLKMRRSAELHILPPLVALDSIVY 182
             G+E A+ +AL+ ++ IG W C +V+SG   D   YL+MR+ A    +P   ALDS++ 
Sbjct: 172 CSGEERAIQKALATMEGIGYWVCGIVLSGCEGDSTAYLEMRKLASGVTVPAFKALDSMIL 231

Query: 181 KKVLKNRELVKEIKDVNDALQCHVSADNSETDDRAKELQRRLEAIEKAQTAIEG 20
             V     +  E+++VN A+   V       ++  K + R  + +E     ++G
Sbjct: 232 AVVSGKGSVPDEVEEVNVAVAMVVDGGGEAVEEMRKRMGRLEKTVEGLGKEVDG 285


Top