BLASTX nr result

ID: Bupleurum21_contig00029094 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029094
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243...   166   2e-39
ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putat...   161   7e-38
gb|AFK35881.1| unknown [Lotus japonicus]                              156   2e-36
ref|XP_003636733.1| Poly [Medicago truncatula] gi|355502668|gb|A...   155   5e-36
ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP...   152   2e-35

>ref|XP_002285464.1| PREDICTED: uncharacterized protein LOC100243613 [Vitis vinifera]
           gi|302142893|emb|CBI20188.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  166 bits (420), Expect = 2e-39
 Identities = 88/184 (47%), Positives = 118/184 (64%), Gaps = 24/184 (13%)
 Frame = -2

Query: 480 STSKVIAEYAKSNRSSCKNCSAVIENKSLRLGIVSKHPRGFDSTKWYHLTCLPFDSTHIS 301
           S+SKV+ EYAKSNRSSCK CS  I   ++RLG+V++  RGFD TKW+H+ C    S  IS
Sbjct: 5   SSSKVVVEYAKSNRSSCKTCSKTISANAVRLGLVTRGARGFDMTKWHHVHCFSAGSESIS 64

Query: 300 SADAIGGFSSLKSSDQEEMKKLMETSEPAKEKVIDEDNDTFKGGKR-------------- 163
           SA+ I GF+SLKSSDQE +KKL++    + ++V+DE  D  +G K               
Sbjct: 65  SAEMIQGFASLKSSDQEALKKLVDGFAKSLDEVLDEGKDLTEGSKELICEELGVHKRDED 124

Query: 162 ----------KFSELSPPFELPKPDISFSQSDIQDKYKDATLSPKWKAFQTIIFLEGDDG 13
                     K +++S P    + +I+F+ S+I+DKYKDATL PKWKAFQT+IFLE DD 
Sbjct: 125 EKDKREERDSKKTKMSAPALKAEQEIAFAVSNIKDKYKDATLLPKWKAFQTVIFLERDDD 184

Query: 12  LHNS 1
           LH+S
Sbjct: 185 LHDS 188


>ref|XP_002524515.1| polynucleotide kinase- 3'-phosphatase, putative [Ricinus communis]
           gi|223536189|gb|EEF37842.1| polynucleotide kinase-
           3'-phosphatase, putative [Ricinus communis]
          Length = 332

 Score =  161 bits (407), Expect = 7e-38
 Identities = 91/175 (52%), Positives = 115/175 (65%), Gaps = 15/175 (8%)
 Frame = -2

Query: 480 STSKVIAEYAKSNRSSCKNCSAVIENKSLRLGIVSKHPRGFDSTKWYHLTCLPFDSTHIS 301
           S +K++AEYAKSNRS+CK CS VI  K+LRLG+V+K  RGFD TKW+HL C    S  IS
Sbjct: 4   SKAKIVAEYAKSNRSTCKKCSTVISAKALRLGLVTKDSRGFDMTKWHHLDCF---SITIS 60

Query: 300 SADAIGGFSSLKSSDQEEMKKLMETSEPAKEKVIDEDNDTFKGGKR-------------- 163
           S DAIGGF+SL+S DQ+ +KKL+  S+  +E V    N   +G KR              
Sbjct: 61  STDAIGGFASLQSRDQDALKKLI--SKGGREVVEGSPN---RGSKRTRANMEEIELEERN 115

Query: 162 -KFSELSPPFELPKPDISFSQSDIQDKYKDATLSPKWKAFQTIIFLEGDDGLHNS 1
              ++LS   E  + +I+ SQ DI+D YKD  L PKWKAFQT+IFLEGDDGLH+S
Sbjct: 116 SMITKLSTATEEAQLEIAVSQIDIKDTYKDVLLLPKWKAFQTVIFLEGDDGLHDS 170


>gb|AFK35881.1| unknown [Lotus japonicus]
          Length = 380

 Score =  156 bits (395), Expect = 2e-36
 Identities = 96/173 (55%), Positives = 116/173 (67%), Gaps = 12/173 (6%)
 Frame = -2

Query: 483 MSTSKVI-AEYAKSNRSSCKNCSAVIENKSLRLGIVSKHP-RGFDSTKWYHLTCLPF--- 319
           M+T + I AEYAKSNRSSCK CS  IENKSLRLGIVSK   RGF++ KW+ LTC P    
Sbjct: 45  MATPESIKAEYAKSNRSSCKGCSKTIENKSLRLGIVSKDKTRGFETVKWHRLTCFPPPYP 104

Query: 318 DSTHISSADAIGGFSSLKSSDQEEMKKLMETSEPAKEKVI-------DEDNDTFKGGKRK 160
           DS HI     I GFSSL+SSDQE +K+L E+ + ++EKV        +E  +T +   +K
Sbjct: 105 DSPHI-----ITGFSSLESSDQEAVKELFESHDCSEEKVSRATEDIQNEQKETEESDSKK 159

Query: 159 FSELSPPFELPKPDISFSQSDIQDKYKDATLSPKWKAFQTIIFLEGDDGLHNS 1
             +LS        DISFS SD+  KYKDATL PKWKAFQT+IFLE DDGL +S
Sbjct: 160 -RKLSTSDVKAVVDISFSVSDVMSKYKDATLLPKWKAFQTVIFLERDDGLRDS 211


>ref|XP_003636733.1| Poly [Medicago truncatula] gi|355502668|gb|AES83871.1| Poly
           [Medicago truncatula]
          Length = 415

 Score =  155 bits (391), Expect = 5e-36
 Identities = 87/167 (52%), Positives = 108/167 (64%), Gaps = 7/167 (4%)
 Frame = -2

Query: 480 STSKVIAEYAKSNRSSCKNCSAVIENKSLRLGIVSKHP-RGFDSTKWYHLTCLPFDSTHI 304
           S S V+AEYAKSNRS+CK CS  I++K+LRLG+++K   RGFD TKW+HLTC    S+H 
Sbjct: 4   SESSVVAEYAKSNRSTCKKCSEAIQSKTLRLGLITKDKSRGFDVTKWHHLTCFTVPSSH- 62

Query: 303 SSADAIGGFSSLKSSDQEEMKKLMETSEP------AKEKVIDEDNDTFKGGKRKFSELSP 142
           SS D I GFSSLKS DQE + KL    E        K K I  +    +    K ++LS 
Sbjct: 63  SSIDKITGFSSLKSGDQEALTKLFTEQEDNSAEASKKTKGIQNEEQDAEERDSKKTKLST 122

Query: 141 PFELPKPDISFSQSDIQDKYKDATLSPKWKAFQTIIFLEGDDGLHNS 1
                  +I+FS SD++  YKDATL PKWKAFQT+IFLE DDGL +S
Sbjct: 123 SDVKAAININFSVSDVKSTYKDATLLPKWKAFQTVIFLERDDGLEDS 169


>ref|XP_004165414.1| PREDICTED: polynucleotide 3'-phosphatase ZDP-like [Cucumis sativus]
          Length = 387

 Score =  152 bits (385), Expect = 2e-35
 Identities = 84/182 (46%), Positives = 111/182 (60%), Gaps = 22/182 (12%)
 Frame = -2

Query: 480 STSKVIAEYAKSNRSSCKNCSAVIENKSLRLGIVSKHPRGFDSTKWYHLTCLPFDSTHIS 301
           S+ K++AEYAKSNRS+CKNCS  I   +LRLG V++  RGFD T+W+H  C  F    +S
Sbjct: 39  SSLKIVAEYAKSNRSTCKNCSKTIPASTLRLGFVTRDGRGFDMTRWFHSDCASFGPRPVS 98

Query: 300 SADAIGGFSSLKSSDQEEMKKLMETSEPAKEKVIDEDND--TFKGGKRKFS--------- 154
           SA+ I GF+ LK SDQE ++K++  S  +K    DED +    +G ++K           
Sbjct: 99  SAEDINGFALLKDSDQEALRKMVCRSHESKVHKRDEDEEDGVEEGDQKKVKVHKKDGVEE 158

Query: 153 -----------ELSPPFELPKPDISFSQSDIQDKYKDATLSPKWKAFQTIIFLEGDDGLH 7
                      +LS     PK DI  + S+I+ KYKDATL PKWKAFQT+IFLE DDGLH
Sbjct: 159 DGVEERDQKNVKLSTSSLQPKLDIVLTASNIKTKYKDATLLPKWKAFQTLIFLEQDDGLH 218

Query: 6   NS 1
           +S
Sbjct: 219 HS 220


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