BLASTX nr result

ID: Bupleurum21_contig00029000 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Bupleurum21_contig00029000
         (974 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243...   169   1e-39
ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana] gi|11072031|gb...   166   1e-38
ref|XP_002887146.1| Fe-S metabolism associated domain-containing...   163   5e-38
ref|XP_002530046.1| Cysteine desulfuration protein sufE, putativ...   155   1e-35
emb|CBI16800.3| unnamed protein product [Vitis vinifera]              154   3e-35

>ref|XP_002276849.2| PREDICTED: uncharacterized protein LOC100243361 [Vitis vinifera]
          Length = 742

 Score =  169 bits (427), Expect = 1e-39
 Identities = 94/155 (60%), Positives = 111/155 (71%), Gaps = 1/155 (0%)
 Frame = -3

Query: 654 CSPRISNPSHTSDNNNVNRKIKCLISEFRSLTEPIERVKRLLHYATLLPFLDESIRCEEN 475
           CS    +PS TS+  +   K+  LISEFR+L EP++RVKRLLHYA++LP L+ES R   N
Sbjct: 82  CSAVSFSPSRTSELASC--KLGRLISEFRTLEEPVDRVKRLLHYASVLPPLEESARVAGN 139

Query: 474 RVPGCTAQVWLEVKMDFEGFMRFRVDSDSEITKGFASCLIWLLDGXXXXXXXXXXXEDLA 295
           RV GCTAQVWLEVKMD EG MRF  DSDSEITKGF SCLIW+LDG           +DLA
Sbjct: 140 RVMGCTAQVWLEVKMDGEGRMRFAADSDSEITKGFCSCLIWVLDGAAPEEVLALKTDDLA 199

Query: 294 EMNVGILPA-NSRVNTWNTVLISMQKRTIALVQQR 193
            +NVG+  A +SRVNTW+ VLI M KRT ALV +R
Sbjct: 200 ALNVGLPGAGHSRVNTWHNVLIVMHKRTKALVAER 234


>ref|NP_176947.1| sulfur E2 [Arabidopsis thaliana]
           gi|11072031|gb|AAG28910.1|AC008113_26 F12A21.6
           [Arabidopsis thaliana] gi|117958779|gb|ABK59690.1|
           At1g67810 [Arabidopsis thaliana]
           gi|332196580|gb|AEE34701.1| sulfur E2 [Arabidopsis
           thaliana]
          Length = 258

 Score =  166 bits (419), Expect = 1e-38
 Identities = 88/145 (60%), Positives = 102/145 (70%), Gaps = 1/145 (0%)
 Frame = -3

Query: 597 KIKCLISEFRSLTEPIERVKRLLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEG 418
           K++ L+SEFRSLTEPI+RVKRLL+YA  L  LDES R  ENRV GCT QVWLE+KMD  G
Sbjct: 77  KLRILVSEFRSLTEPIDRVKRLLNYAATLAPLDESARISENRVTGCTTQVWLEIKMDEFG 136

Query: 417 FMRFRVDSDSEITKGFASCLIWLLDGXXXXXXXXXXXEDLAEMNVGIL-PANSRVNTWNT 241
            MRF+ DSDSEI+KGF SCLIW+LDG           EDL+EMNVG+     SRVNTW+ 
Sbjct: 137 RMRFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHN 196

Query: 240 VLISMQKRTIALVQQRFPDQSNTLP 166
           VL+SMQKRT+ LV      Q    P
Sbjct: 197 VLMSMQKRTMTLVATDVAHQRGQRP 221


>ref|XP_002887146.1| Fe-S metabolism associated domain-containing protein [Arabidopsis
           lyrata subsp. lyrata] gi|297332987|gb|EFH63405.1| Fe-S
           metabolism associated domain-containing protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 258

 Score =  163 bits (413), Expect = 5e-38
 Identities = 99/203 (48%), Positives = 119/203 (58%), Gaps = 21/203 (10%)
 Frame = -3

Query: 711 TTQNSRKCKP---FSLYCKQPICSPRIS-----NPSHTSD------------NNNVNRKI 592
           T++ +RK  P   FS +  +PI   R S     NP+  S                   K+
Sbjct: 18  TSRPTRKSFPNPRFSRFSPKPITCMRDSLNLGSNPNAPSPLSFATVSVEAPLGTKTTDKL 77

Query: 591 KCLISEFRSLTEPIERVKRLLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEGFM 412
           + L+SEFRSLTEPI+RVKRLLHYA  L  LD+S R   NRV GCT QVWLE+KMD  G M
Sbjct: 78  RILVSEFRSLTEPIDRVKRLLHYAATLAPLDDSARVSANRVTGCTTQVWLEIKMDEFGRM 137

Query: 411 RFRVDSDSEITKGFASCLIWLLDGXXXXXXXXXXXEDLAEMNVGIL-PANSRVNTWNTVL 235
           RF+ DSDSEI+KGF SCLIW+LDG           EDL+EMNVG+     SRVNTW+ VL
Sbjct: 138 RFKADSDSEISKGFCSCLIWILDGAKPEEVMGVRSEDLSEMNVGVHGKEQSRVNTWHNVL 197

Query: 234 ISMQKRTIALVQQRFPDQSNTLP 166
           + MQKRT+ LV      Q    P
Sbjct: 198 MCMQKRTMTLVAADVAHQRGQRP 220


>ref|XP_002530046.1| Cysteine desulfuration protein sufE, putative [Ricinus communis]
           gi|223530462|gb|EEF32346.1| Cysteine desulfuration
           protein sufE, putative [Ricinus communis]
          Length = 231

 Score =  155 bits (392), Expect = 1e-35
 Identities = 88/162 (54%), Positives = 105/162 (64%), Gaps = 12/162 (7%)
 Frame = -3

Query: 642 ISNPSHTSDNNNVNRKIKC-----------LISEFRSLTEPIERVKRLLHYATLLPFLDE 496
           ++N    ++N + N  + C           L+SEF SLTEPI+RVKRLL YA  LP  DE
Sbjct: 1   MNNKRLNNNNCSTNLSVSCYPTVAVSRLERLVSEFESLTEPIDRVKRLLDYAARLPPFDE 60

Query: 495 SIRCEENRVPGCTAQVWLEVKMDFEGFMRFRVDSDSEITKGFASCLIWLLDGXXXXXXXX 316
           S R   NRV GCT QVWLEV++D +G +RFR DSDSEITKGF SCLI LLDG        
Sbjct: 61  SARSPGNRVTGCTTQVWLEVRIDEKGRVRFRGDSDSEITKGFISCLISLLDGLEPDEVVS 120

Query: 315 XXXEDLAEMNVGIL-PANSRVNTWNTVLISMQKRTIALVQQR 193
              EDLA MNVGI   A SR+NTWN VLI+M  RT+ALV ++
Sbjct: 121 VKAEDLAAMNVGIYGKAQSRINTWNNVLINMHNRTLALVAEQ 162


>emb|CBI16800.3| unnamed protein product [Vitis vinifera]
          Length = 284

 Score =  154 bits (389), Expect = 3e-35
 Identities = 83/138 (60%), Positives = 98/138 (71%), Gaps = 3/138 (2%)
 Frame = -3

Query: 597 KIKCLISEFRSLTEPIERVKRLLHYATLLPFLDESIRCEENRVPGCTAQVWLEVKMDFEG 418
           +++ L SEF  LTEPI+RVKRLLHYA LLP  DES R   NRV GCTA+VWL+V++D  G
Sbjct: 62  RLRSLASEFTGLTEPIDRVKRLLHYAELLPPFDESARVPANRVTGCTAEVWLDVRLDEFG 121

Query: 417 FMRFRVDSDSEITKGFASCLIWLLDGXXXXXXXXXXXEDLAEMNVGI---LPANSRVNTW 247
             RF VDSDSEITKGF SCLI +LDG           EDL EMNVG+   + A+SRVN W
Sbjct: 122 GTRFAVDSDSEITKGFCSCLIRVLDGAAPEEVLKMKAEDLMEMNVGVGLGVRAHSRVNAW 181

Query: 246 NTVLISMQKRTIALVQQR 193
           + +L SMQKRT ALV +R
Sbjct: 182 HNILTSMQKRTEALVAER 199


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